RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.52□□□□□ -0.08
HTT-204ENST00000508321 MSH6P52701 1360 aa14.52□□□□□ -0.08
HTT-204ENST00000508321 USP47Q96K76 1375 aa14.52□□□□□ -0.08
HTT-204ENST00000508321 PROSER2Q86WR7 435 aaPredicted RBP14.52□□□□□ -0.09
HTT-204ENST00000508321 STK26Q9P289 416 aa14.52□□□□□ -0.09
HTT-204ENST00000508321 FMN2Q9NZ56 1722 aa14.5□□□□□ -0.09
HTT-204ENST00000508321 CENPJQ9HC77 1338 aaPredicted RBP14.5□□□□□ -0.09
HTT-204ENST00000508321 TRAK1Q9UPV9 953 aa14.5□□□□□ -0.09
HTT-204ENST00000508321 PRAM1Q96QH2 718 aa14.49□□□□□ -0.09
HTT-204ENST00000508321 POGKQ9P215 609 aa14.49□□□□□ -0.09
HTT-204ENST00000508321 PLEKHH1Q9ULM0 1364 aa14.48□□□□□ -0.09
HTT-204ENST00000508321 SLC24A1O60721 1099 aa14.48□□□□□ -0.09
HTT-204ENST00000508321 ITSN1Q15811 1721 aa14.48□□□□□ -0.09
HTT-204ENST00000508321 C14orf37Q86TY3 774 aa14.46□□□□□ -0.09
HTT-204ENST00000508321 C19orf44Q9H6X5 657 aa14.46□□□□□ -0.09
HTT-204ENST00000508321 ANKARQ7Z5J8 1434 aa14.46□□□□□ -0.09
HTT-204ENST00000508321 TULP4Q9NRJ4 1543 aa14.46□□□□□ -0.1
HTT-204ENST00000508321 WAPLQ7Z5K2 1190 aa14.44□□□□□ -0.1
HTT-204ENST00000508321 CADPS2Q86UW7 1296 aa14.44□□□□□ -0.1
HTT-204ENST00000508321 KIF1AQ12756 1690 aa14.44□□□□□ -0.1
HTT-204ENST00000508321 TOPAZ1Q8N9V7 1692 aa14.44□□□□□ -0.1
HTT-204ENST00000508321 EIF4G2P78344 907 aaKnown RBP eCLIP14.43□□□□□ -0.1
HTT-204ENST00000508321 MST1RQ04912 1400 aa14.42□□□□□ -0.1
HTT-204ENST00000508321 ATF3P18847 181 aa14.42□□□□□ -0.1
HTT-204ENST00000508321 USP32Q8NFA0 1604 aa14.41□□□□□ -0.1
HTT-204ENST00000508321 EVC2Q86UK5 1308 aa14.41□□□□□ -0.1
HTT-204ENST00000508321 ATP7BP35670 1465 aa14.4□□□□□ -0.1
HTT-204ENST00000508321 SAFB2Q14151 953 aaKnown RBP eCLIP14.4□□□□□ -0.1
HTT-204ENST00000508321 MINK1Q8N4C8 1332 aaPredicted RBP14.4□□□□□ -0.1
HTT-204ENST00000508321 ST20-MTHFSA0A0A6YYL1 179 aa14.39□□□□□ -0.11
HTT-204ENST00000508321 TOM1O60784 492 aa14.39□□□□□ -0.11
HTT-204ENST00000508321 ROBO1Q9Y6N7 1651 aa14.39□□□□□ -0.11
HTT-204ENST00000508321 C1orf167Q5SNV9 1468 aa14.38□□□□□ -0.11
HTT-204ENST00000508321 ATAD2Q6PL18 1390 aa14.38□□□□□ -0.11
HTT-204ENST00000508321 WASLO00401 505 aaPredicted RBP14.38□□□□□ -0.11
HTT-204ENST00000508321 RBM33Q96EV2 1170 aaKnown RBP14.38□□□□□ -0.11
HTT-204ENST00000508321 PUS7Q96PZ0 661 aaKnown RBP14.38□□□□□ -0.11
HTT-204ENST00000508321 TESK2Q96S53 571 aa14.38□□□□□ -0.11
HTT-204ENST00000508321 RGPD8O14715 1765 aaPredicted RBP14.37□□□□□ -0.11
HTT-204ENST00000508321 NINLQ9Y2I6 1382 aa14.37□□□□□ -0.11
HTT-204ENST00000508321 CDCA8Q53HL2 280 aa14.37□□□□□ -0.11
HTT-204ENST00000508321 NHSL1Q5SYE7 1610 aa14.37□□□□□ -0.11
HTT-204ENST00000508321 HSPA5P11021 654 aaKnown RBP14.36□□□□□ -0.11
HTT-204ENST00000508321 TMF1P82094 1093 aa14.36□□□□□ -0.11
HTT-204ENST00000508321 AHDC1Q5TGY3 1603 aaPredicted RBP14.35□□□□□ -0.11
HTT-204ENST00000508321 UBAP1LF5GYI3 381 aa14.35□□□□□ -0.11
HTT-204ENST00000508321 HIRIP3Q9BW71 556 aaPredicted RBP14.35□□□□□ -0.11
HTT-204ENST00000508321 MYOM1P52179 1685 aa14.34□□□□□ -0.11
HTT-204ENST00000508321 SRPK2P78362 688 aaKnown RBP14.33□□□□□ -0.12
HTT-204ENST00000508321 CDK19Q9BWU1 502 aa14.33□□□□□ -0.12
HTT-204ENST00000508321 SLAIN2Q9P270 581 aa14.33□□□□□ -0.12
HTT-204ENST00000508321 AKAP12Q02952 1782 aa14.32□□□□□ -0.12
HTT-204ENST00000508321 PPIP5K1Q6PFW1 1433 aa14.31□□□□□ -0.12
HTT-204ENST00000508321 MON2Q7Z3U7 1717 aa14.3□□□□□ -0.12
HTT-204ENST00000508321 CCDC61Q9Y6R9 512 aa14.3□□□□□ -0.12
HTT-204ENST00000508321 PRR36Q9H6K5 1346 aa14.3□□□□□ -0.12
HTT-204ENST00000508321 PHLPP1O60346 1717 aa14.29□□□□□ -0.12
HTT-204ENST00000508321 NUDT16Q96DE0 195 aaKnown RBP14.29□□□□□ -0.12
HTT-204ENST00000508321 POLR3AO14802 1390 aaPredicted RBP14.29□□□□□ -0.12
HTT-204ENST00000508321 COL16A1Q07092 1604 aaPredicted RBP14.28□□□□□ -0.12
HTT-204ENST00000508321 MED1Q15648 1581 aaPredicted RBP14.28□□□□□ -0.12
HTT-204ENST00000508321 BRINP3Q76B58 766 aa14.28□□□□□ -0.12
HTT-204ENST00000508321 NRKQ7Z2Y5 1582 aa14.28□□□□□ -0.12
HTT-204ENST00000508321 NPHP3Q7Z494 1330 aa14.28□□□□□ -0.12
HTT-204ENST00000508321 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
HTT-204ENST00000508321 TRPM3Q9HCF6 1732 aaPredicted RBP14.27□□□□□ -0.12
HTT-204ENST00000508321 BRD4O60885 1362 aaPredicted RBP14.27□□□□□ -0.12
HTT-204ENST00000508321 ESCO1Q5FWF5 840 aa14.27□□□□□ -0.13
HTT-204ENST00000508321 PHF8Q9UPP1 1060 aa14.27□□□□□ -0.13
HTT-204ENST00000508321 PXDNQ92626 1479 aa14.26□□□□□ -0.13
HTT-204ENST00000508321 PLEKHG3A1L390 1219 aa14.26□□□□□ -0.13
HTT-204ENST00000508321 ANKRD36BQ8N2N9 1353 aa14.24□□□□□ -0.13
HTT-204ENST00000508321 NUTM2FA1L443 756 aa14.24□□□□□ -0.13
HTT-204ENST00000508321 HSPA1LP34931 641 aa14.24□□□□□ -0.13
HTT-204ENST00000508321 CPSF1Q10570 1443 aaKnown RBP14.24□□□□□ -0.13
HTT-204ENST00000508321 SHPRHQ149N8 1683 aa14.23□□□□□ -0.13
HTT-204ENST00000508321 CCDC7Q96M83 1385 aa14.23□□□□□ -0.13
HTT-204ENST00000508321 KIF7Q2M1P5 1343 aa14.23□□□□□ -0.13
HTT-204ENST00000508321 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
HTT-204ENST00000508321 PIP4K2BP78356 416 aa14.23□□□□□ -0.13
HTT-204ENST00000508321 ORAI2Q96SN7 254 aa14.23□□□□□ -0.13
HTT-204ENST00000508321 CD163L1Q9NR16 1453 aa14.23□□□□□ -0.13
HTT-204ENST00000508321 USP54Q70EL1 1684 aa14.23□□□□□ -0.13
HTT-204ENST00000508321 ALS2Q96Q42 1657 aa14.23□□□□□ -0.13
HTT-204ENST00000508321 USP6P35125 1406 aa14.23□□□□□ -0.13
HTT-204ENST00000508321 SBNO1A3KN83 1393 aa14.22□□□□□ -0.13
HTT-204ENST00000508321 TERF2IPQ9NYB0 399 aa14.22□□□□□ -0.13
HTT-204ENST00000508321 COL22A1Q8NFW1 1626 aaPredicted RBP14.22□□□□□ -0.13
HTT-204ENST00000508321 SOS2Q07890 1332 aaPredicted RBP14.21□□□□□ -0.13
HTT-204ENST00000508321 NGDNQ8NEJ9 315 aaKnown RBP14.21□□□□□ -0.13
HTT-204ENST00000508321 ZNF692Q9BU19 519 aaPredicted RBP14.21□□□□□ -0.13
HTT-204ENST00000508321 TNS3Q68CZ2 1445 aa14.21□□□□□ -0.13
HTT-204ENST00000508321 EDC4Q6P2E9 1401 aaKnown RBP14.21□□□□□ -0.13
HTT-204ENST00000508321 A0A1W2PP64 1363 aa14.21□□□□□ -0.14
HTT-204ENST00000508321 KIF20BQ96Q89 1820 aa14.2□□□□□ -0.14
HTT-204ENST00000508321 ACEP12821 1306 aa14.2□□□□□ -0.14
HTT-204ENST00000508321 PSME1Q06323 249 aa14.2□□□□□ -0.14
HTT-204ENST00000508321 HDGFL2Q7Z4V5 671 aaPredicted RBP14.2□□□□□ -0.14
HTT-204ENST00000508321 CABP1Q9NZU7 370 aa14.2□□□□□ -0.14
HTT-204ENST00000508321 TMC1Q8TDI8 760 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms