RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 POLR3EQ9NVU0 708 aa9.81□□□□□ -0.84
PDGFRA-206ENST00000508170 CAMK2BQ13554 666 aa9.8□□□□□ -0.84
PDGFRA-206ENST00000508170 MFSD10Q14728 455 aa9.8□□□□□ -0.84
PDGFRA-206ENST00000508170 PNISRQ8TF01 805 aaKnown RBP9.8□□□□□ -0.84
PDGFRA-206ENST00000508170 PIK3R5Q8WYR1 880 aa9.8□□□□□ -0.84
PDGFRA-206ENST00000508170 HOXA2O43364 376 aa9.8□□□□□ -0.84
PDGFRA-206ENST00000508170 GYS2P54840 703 aa9.8□□□□□ -0.84
PDGFRA-206ENST00000508170 TBX4P57082 545 aa9.8□□□□□ -0.84
PDGFRA-206ENST00000508170 RHBDL3P58872 404 aa9.8□□□□□ -0.84
PDGFRA-206ENST00000508170 ERICH6BQ5W0A0 696 aa9.8□□□□□ -0.84
PDGFRA-206ENST00000508170 B4GALNT3Q6L9W6 998 aa9.8□□□□□ -0.84
PDGFRA-206ENST00000508170 C9orf131Q5VYM1 1079 aa9.79□□□□□ -0.84
PDGFRA-206ENST00000508170 CHMP4BQ9H444 224 aaKnown RBP9.79□□□□□ -0.84
PDGFRA-206ENST00000508170 PRR12Q9ULL5 1215 aa9.79□□□□□ -0.84
PDGFRA-206ENST00000508170 G3BP2Q9UN86 482 aaKnown RBP9.79□□□□□ -0.84
PDGFRA-206ENST00000508170 ZCCHC6Q5VYS8 1495 aaKnown RBP9.79□□□□□ -0.84
PDGFRA-206ENST00000508170 EPB41L2O43491 1005 aaKnown RBP9.79□□□□□ -0.84
PDGFRA-206ENST00000508170 PLEKHG6Q3KR16 790 aa9.79□□□□□ -0.84
PDGFRA-206ENST00000508170 IRF2BPLQ9H1B7 796 aa9.79□□□□□ -0.84
PDGFRA-206ENST00000508170 ATG7O95352 703 aa9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 FECHP22830 423 aa9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 SSFA2P28290 1259 aa9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 BIRC2Q13490 618 aa9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 AMOTL1Q8IY63 956 aa9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 RFC5P40937 340 aa9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 PPP4CP60510 307 aa9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 CDCA8Q53HL2 280 aa9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 CCAR1Q8IX12 1150 aaKnown RBP9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 CCDC85AQ96PX6 553 aaPredicted RBP9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 RPS6KC1Q96S38 1066 aa9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 ANP32EQ9BTT0 268 aa9.78□□□□□ -0.84
PDGFRA-206ENST00000508170 CCDC189A1A4V9 331 aa9.77□□□□□ -0.85
PDGFRA-206ENST00000508170 ZNF500O60304 480 aaPredicted RBP9.77□□□□□ -0.85
PDGFRA-206ENST00000508170 PHLDB3Q6NSJ2 640 aa9.77□□□□□ -0.85
PDGFRA-206ENST00000508170 TBC1D2BQ9UPU7 963 aa9.77□□□□□ -0.85
PDGFRA-206ENST00000508170 CALRP27797 417 aaKnown RBP9.76□□□□□ -0.85
PDGFRA-206ENST00000508170 FBXO31Q5XUX0 539 aaPredicted RBP9.76□□□□□ -0.85
PDGFRA-206ENST00000508170 FAM212AQ96EL1 285 aa9.76□□□□□ -0.85
PDGFRA-206ENST00000508170 BRINP2Q9C0B6 783 aa9.76□□□□□ -0.85
PDGFRA-206ENST00000508170 IQSEC3Q9UPP2 1182 aaPredicted RBP9.76□□□□□ -0.85
PDGFRA-206ENST00000508170 COL4A3BPQ9Y5P4 624 aa9.76□□□□□ -0.85
PDGFRA-206ENST00000508170 SENP7Q9BQF6 1050 aa9.76□□□□□ -0.85
PDGFRA-206ENST00000508170 JADE2Q9NQC1 790 aa9.76□□□□□ -0.85
PDGFRA-206ENST00000508170 WWC3Q9ULE0 1092 aa9.76□□□□□ -0.85
PDGFRA-206ENST00000508170 LMOD1P29536 600 aaPredicted RBP9.75□□□□□ -0.85
PDGFRA-206ENST00000508170 EVA1CP58658 441 aa9.75□□□□□ -0.85
PDGFRA-206ENST00000508170 HDLBPQ00341 1268 aaKnown RBP9.75□□□□□ -0.85
PDGFRA-206ENST00000508170 CXorf38Q8TB03 319 aa9.75□□□□□ -0.85
PDGFRA-206ENST00000508170 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
PDGFRA-206ENST00000508170 TMX4Q9H1E5 349 aaPredicted RBP9.75□□□□□ -0.85
PDGFRA-206ENST00000508170 PRKAG2Q9UGJ0 569 aa9.75□□□□□ -0.85
PDGFRA-206ENST00000508170 FBXO9Q9UK97 447 aaPredicted RBP9.75□□□□□ -0.85
PDGFRA-206ENST00000508170 PALM3A6NDB9 673 aaPredicted RBP9.75□□□□□ -0.85
PDGFRA-206ENST00000508170 GTF2F1P35269 517 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDGFRA-206ENST00000508170 SOX12O15370 315 aa9.74□□□□□ -0.85
PDGFRA-206ENST00000508170 ZNF280DQ6N043 979 aa9.74□□□□□ -0.85
PDGFRA-206ENST00000508170 RPUSD2Q8IZ73 545 aaKnown RBP9.74□□□□□ -0.85
PDGFRA-206ENST00000508170 ZCRB1Q8TBF4 217 aaKnown RBP9.74□□□□□ -0.85
PDGFRA-206ENST00000508170 SOWAHDA6NJG2 315 aa9.74□□□□□ -0.85
PDGFRA-206ENST00000508170 GNPATO15228 680 aa9.74□□□□□ -0.85
PDGFRA-206ENST00000508170 FBXO33Q7Z6M2 555 aa9.74□□□□□ -0.85
PDGFRA-206ENST00000508170 SCYL1Q96KG9 808 aa9.74□□□□□ -0.85
PDGFRA-206ENST00000508170 SALL2Q9Y467 1007 aaPredicted RBP9.74□□□□□ -0.85
PDGFRA-206ENST00000508170 RAD51AP2Q09MP3 1159 aa9.73□□□□□ -0.85
PDGFRA-206ENST00000508170 JAZF1Q86VZ6 243 aa9.73□□□□□ -0.85
PDGFRA-206ENST00000508170 TINF2Q9BSI4 451 aa9.73□□□□□ -0.85
PDGFRA-206ENST00000508170 CLGNO14967 610 aa9.72□□□□□ -0.85
PDGFRA-206ENST00000508170 ZNF622Q969S3 477 aaKnown RBP eCLIP9.72□□□□□ -0.85
PDGFRA-206ENST00000508170 BACH2Q9BYV9 841 aa9.72□□□□□ -0.85
PDGFRA-206ENST00000508170 PCDH12Q9NPG4 1184 aa9.72□□□□□ -0.85
PDGFRA-206ENST00000508170 CCDC96Q2M329 555 aa9.72□□□□□ -0.85
PDGFRA-206ENST00000508170 ZSWIM4Q9H7M6 989 aa9.72□□□□□ -0.85
PDGFRA-206ENST00000508170 ARHGEF10LQ9HCE6 1279 aa9.72□□□□□ -0.85
PDGFRA-206ENST00000508170 BSDC1Q9NW68 430 aaPredicted RBP9.72□□□□□ -0.85
PDGFRA-206ENST00000508170 DMGDHQ9UI17 866 aaKnown RBP9.72□□□□□ -0.85
PDGFRA-206ENST00000508170 CFAP69A5D8W1 941 aa9.71□□□□□ -0.85
PDGFRA-206ENST00000508170 PYGBP11216 843 aa9.71□□□□□ -0.85
PDGFRA-206ENST00000508170 LMOD3Q0VAK6 560 aa9.71□□□□□ -0.85
PDGFRA-206ENST00000508170 STAG1Q8WVM7 1258 aa9.71□□□□□ -0.85
PDGFRA-206ENST00000508170 SWAP70Q9UH65 585 aa9.71□□□□□ -0.85
PDGFRA-206ENST00000508170 NUTM2FA1L443 756 aa9.71□□□□□ -0.86
PDGFRA-206ENST00000508170 STK10O94804 968 aaKnown RBP9.71□□□□□ -0.86
PDGFRA-206ENST00000508170 PDE4AP27815 886 aa9.71□□□□□ -0.86
PDGFRA-206ENST00000508170 FMNL3Q8IVF7 1028 aa9.71□□□□□ -0.86
PDGFRA-206ENST00000508170 TRIM34Q9BYJ4 488 aa9.71□□□□□ -0.86
PDGFRA-206ENST00000508170 NRBP1Q9UHY1 535 aa9.71□□□□□ -0.86
PDGFRA-206ENST00000508170 S100BP04271 92 aaPredicted RBP9.7□□□□□ -0.86
PDGFRA-206ENST00000508170 ATP2B1P20020 1258 aa9.7□□□□□ -0.86
PDGFRA-206ENST00000508170 BMS1Q14692 1282 aaKnown RBP9.7□□□□□ -0.86
PDGFRA-206ENST00000508170 RNF187Q5TA31 235 aaPredicted RBP9.7□□□□□ -0.86
PDGFRA-206ENST00000508170 PMFBP1Q8TBY8 1022 aa9.7□□□□□ -0.86
PDGFRA-206ENST00000508170 MSH5O43196 834 aa9.7□□□□□ -0.86
PDGFRA-206ENST00000508170 SPC25Q9HBM1 224 aa9.69□□□□□ -0.86
PDGFRA-206ENST00000508170 XPCQ01831 940 aaPredicted RBP9.68□□□□□ -0.86
PDGFRA-206ENST00000508170 TMC2Q8TDI7 906 aa9.68□□□□□ -0.86
PDGFRA-206ENST00000508170 CRISPLD2Q9H0B8 497 aa9.68□□□□□ -0.86
PDGFRA-206ENST00000508170 QTRT2Q9H974 415 aaKnown RBP9.68□□□□□ -0.86
PDGFRA-206ENST00000508170 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.68□□□□□ -0.86
PDGFRA-206ENST00000508170 SSUH2Q9Y2M2 353 aa9.68□□□□□ -0.86
PDGFRA-206ENST00000508170 SERPINB4P48594 390 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms