RNA–Protein interactions for RNA: ENST00000508132.1

CDH6-204, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 678 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-204ENST00000508132 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
CDH6-204ENST00000508132 ABCA9Q8IUA7 1624 aa12.57□□□□□ -0.4
CDH6-204ENST00000508132 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
CDH6-204ENST00000508132 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
CDH6-204ENST00000508132 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
CDH6-204ENST00000508132 KCNC4Q03721 635 aa12.54□□□□□ -0.4
CDH6-204ENST00000508132 NYAP1Q6ZVC0 841 aa12.54□□□□□ -0.4
CDH6-204ENST00000508132 SAMD7Q7Z3H4 446 aa12.54□□□□□ -0.4
CDH6-204ENST00000508132 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.54□□□□□ -0.4
CDH6-204ENST00000508132 CARMIL1Q5VZK9 1371 aa12.54□□□□□ -0.4
CDH6-204ENST00000508132 IQSEC2Q5JU85 1478 aa12.53□□□□□ -0.4
CDH6-204ENST00000508132 PRSS12P56730 875 aa12.53□□□□□ -0.4
CDH6-204ENST00000508132 OSBPP22059 807 aa12.51□□□□□ -0.41
CDH6-204ENST00000508132 CEBPAP49715 358 aaPredicted RBP12.51□□□□□ -0.41
CDH6-204ENST00000508132 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
CDH6-204ENST00000508132 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
CDH6-204ENST00000508132 NEO1Q92859 1461 aa12.51□□□□□ -0.41
CDH6-204ENST00000508132 MLECQ14165 292 aa12.5□□□□□ -0.41
CDH6-204ENST00000508132 ARIH1Q9Y4X5 557 aaPredicted RBP12.5□□□□□ -0.41
CDH6-204ENST00000508132 PTPRTO14522 1441 aa12.5□□□□□ -0.41
CDH6-204ENST00000508132 FANCAO15360 1455 aa12.49□□□□□ -0.41
CDH6-204ENST00000508132 PHLDB1Q86UU1 1377 aa12.48□□□□□ -0.41
CDH6-204ENST00000508132 ARID3CA6NKF2 412 aa12.48□□□□□ -0.41
CDH6-204ENST00000508132 TATDN2Q93075 761 aa12.48□□□□□ -0.41
CDH6-204ENST00000508132 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
CDH6-204ENST00000508132 ARHGEF12Q9NZN5 1544 aa12.47□□□□□ -0.41
CDH6-204ENST00000508132 PPP4CP60510 307 aa12.47□□□□□ -0.41
CDH6-204ENST00000508132 TJAP1Q5JTD0 557 aa12.46□□□□□ -0.41
CDH6-204ENST00000508132 WDR70Q9NW82 654 aa12.46□□□□□ -0.41
CDH6-204ENST00000508132 UBAP1LF5GYI3 381 aa12.45□□□□□ -0.42
CDH6-204ENST00000508132 AMER1Q5JTC6 1135 aaPredicted RBP12.45□□□□□ -0.42
CDH6-204ENST00000508132 POGZQ7Z3K3 1410 aa12.45□□□□□ -0.42
CDH6-204ENST00000508132 ZMYM4Q5VZL5 1548 aa12.44□□□□□ -0.42
CDH6-204ENST00000508132 ZFYVE16Q7Z3T8 1539 aa12.44□□□□□ -0.42
CDH6-204ENST00000508132 LOC105371045A0A1W2PR82 267 aa12.44□□□□□ -0.42
CDH6-204ENST00000508132 NUDT18Q6ZVK8 323 aa12.44□□□□□ -0.42
CDH6-204ENST00000508132 ATP10BO94823 1461 aa12.43□□□□□ -0.42
CDH6-204ENST00000508132 NBPF26B4DH59 902 aa12.43□□□□□ -0.42
CDH6-204ENST00000508132 HSPA1LP34931 641 aa12.43□□□□□ -0.42
CDH6-204ENST00000508132 AKNAQ7Z591 1439 aa12.43□□□□□ -0.42
CDH6-204ENST00000508132 DENND4BO75064 1496 aaPredicted RBP12.42□□□□□ -0.42
CDH6-204ENST00000508132 SETD1BQ9UPS6 1966 aaKnown RBP12.42□□□□□ -0.42
CDH6-204ENST00000508132 MTRQ99707 1265 aa12.42□□□□□ -0.42
CDH6-204ENST00000508132 FHOD3Q2V2M9 1422 aa12.42□□□□□ -0.42
CDH6-204ENST00000508132 UHRF1BP1Q6BDS2 1440 aa12.42□□□□□ -0.42
CDH6-204ENST00000508132 RNF40O75150 1001 aa12.41□□□□□ -0.42
CDH6-204ENST00000508132 NPDC1Q9NQX5 325 aaPredicted RBP12.41□□□□□ -0.42
CDH6-204ENST00000508132 EEA1Q15075 1411 aa12.4□□□□□ -0.42
CDH6-204ENST00000508132 PADI6Q6TGC4 694 aa12.4□□□□□ -0.42
CDH6-204ENST00000508132 ZNF516Q92618 1163 aa12.4□□□□□ -0.42
CDH6-204ENST00000508132 HECW1Q76N89 1606 aa12.4□□□□□ -0.42
CDH6-204ENST00000508132 ZNF335Q9H4Z2 1342 aaPredicted RBP12.39□□□□□ -0.43
CDH6-204ENST00000508132 C3P01024 1663 aa12.39□□□□□ -0.43
CDH6-204ENST00000508132 CTTNBP2Q8WZ74 1663 aa12.39□□□□□ -0.43
CDH6-204ENST00000508132 EFCAB5A4FU69 1503 aa12.39□□□□□ -0.43
CDH6-204ENST00000508132 APLP1P51693 650 aa12.39□□□□□ -0.43
CDH6-204ENST00000508132 NCOA1Q15788 1441 aa12.38□□□□□ -0.43
CDH6-204ENST00000508132 TTC13Q8NBP0 860 aa12.38□□□□□ -0.43
CDH6-204ENST00000508132 LCE2BO14633 110 aa12.37□□□□□ -0.43
CDH6-204ENST00000508132 Q6ZNB5 142 aa12.37□□□□□ -0.43
CDH6-204ENST00000508132 SRCAPQ6ZRS2 3230 aa12.36□□□□□ -0.43
CDH6-204ENST00000508132 MLLT3P42568 568 aaPredicted RBP12.36□□□□□ -0.43
CDH6-204ENST00000508132 SWT1Q5T5J6 900 aaKnown RBP12.34□□□□□ -0.43
CDH6-204ENST00000508132 RBM27Q9P2N5 1060 aaKnown RBP12.34□□□□□ -0.43
CDH6-204ENST00000508132 NKX2-3Q8TAU0 364 aa12.33□□□□□ -0.44
CDH6-204ENST00000508132 IL21Q9HBE4 155 aa12.33□□□□□ -0.44
CDH6-204ENST00000508132 TSHZ2Q9NRE2 1034 aa12.33□□□□□ -0.44
CDH6-204ENST00000508132 RAPGEF2Q9Y4G8 1499 aa12.33□□□□□ -0.44
CDH6-204ENST00000508132 CAMSAP1Q5T5Y3 1602 aa12.33□□□□□ -0.44
CDH6-204ENST00000508132 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
CDH6-204ENST00000508132 RGS17Q9UGC6 210 aaPredicted RBP12.32□□□□□ -0.44
CDH6-204ENST00000508132 ALKQ9UM73 1620 aa12.32□□□□□ -0.44
CDH6-204ENST00000508132 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
CDH6-204ENST00000508132 PRKD2Q9BZL6 878 aa12.31□□□□□ -0.44
CDH6-204ENST00000508132 MAGI2Q86UL8 1455 aa12.31□□□□□ -0.44
CDH6-204ENST00000508132 SETD1AO15047 1707 aaKnown RBP12.31□□□□□ -0.44
CDH6-204ENST00000508132 CFAP74Q9C0B2 1584 aa12.3□□□□□ -0.44
CDH6-204ENST00000508132 GOLGA3Q08378 1498 aa12.3□□□□□ -0.44
CDH6-204ENST00000508132 ATP10AO60312 1499 aa12.29□□□□□ -0.44
CDH6-204ENST00000508132 KCNV2Q8TDN2 545 aa12.29□□□□□ -0.44
CDH6-204ENST00000508132 COPS2P61201 443 aa12.28□□□□□ -0.44
CDH6-204ENST00000508132 C9orf84Q5VXU9 1444 aa12.28□□□□□ -0.44
CDH6-204ENST00000508132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.44
CDH6-204ENST00000508132 EYA1Q99502 592 aa12.27□□□□□ -0.45
CDH6-204ENST00000508132 GFRA3O60609 400 aa12.26□□□□□ -0.45
CDH6-204ENST00000508132 RAPGEF6Q8TEU7 1601 aa12.26□□□□□ -0.45
CDH6-204ENST00000508132 TRAPPC8Q9Y2L5 1435 aa12.23□□□□□ -0.45
CDH6-204ENST00000508132 UBTFP17480 764 aaKnown RBP12.23□□□□□ -0.45
CDH6-204ENST00000508132 HDGFP51858 240 aaKnown RBP12.23□□□□□ -0.45
CDH6-204ENST00000508132 P3H3Q8IVL6 736 aa12.23□□□□□ -0.45
CDH6-204ENST00000508132 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.23□□□□□ -0.45
CDH6-204ENST00000508132 NUP153P49790 1475 aaKnown RBP12.22□□□□□ -0.45
CDH6-204ENST00000508132 SCAPERQ9BY12 1400 aa12.22□□□□□ -0.45
CDH6-204ENST00000508132 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
CDH6-204ENST00000508132 SUPT6HQ7KZ85 1726 aaKnown RBP12.21□□□□□ -0.45
CDH6-204ENST00000508132 SLF2Q8IX21 1173 aa12.21□□□□□ -0.45
CDH6-204ENST00000508132 DIP2CQ9Y2E4 1556 aa12.21□□□□□ -0.46
CDH6-204ENST00000508132 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
CDH6-204ENST00000508132 TCOF1Q13428 1488 aaKnown RBP12.2□□□□□ -0.46
CDH6-204ENST00000508132 PRXQ9BXM0 1461 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms