RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 GPCPD1Q9NPB8 672 aa8.29□□□□□ -1.08
CLDND1-213ENST00000506927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLDND1-213ENST00000506927 ARAP1Q96P48 1450 aa8.29□□□□□ -1.08
CLDND1-213ENST00000506927 ITGBL1O95965 494 aaPredicted RBP8.28□□□□□ -1.08
CLDND1-213ENST00000506927 AMHR2Q16671 573 aa8.28□□□□□ -1.08
CLDND1-213ENST00000506927 KMT5BQ4FZB7 885 aa8.28□□□□□ -1.08
CLDND1-213ENST00000506927 TMUB1Q9BVT8 246 aa8.28□□□□□ -1.08
CLDND1-213ENST00000506927 PRR14Q9BWN1 585 aa8.28□□□□□ -1.08
CLDND1-213ENST00000506927 ACTN4O43707 911 aaKnown RBP8.27□□□□□ -1.09
CLDND1-213ENST00000506927 TJAP1Q5JTD0 557 aa8.27□□□□□ -1.09
CLDND1-213ENST00000506927 MTRQ99707 1265 aa8.27□□□□□ -1.09
CLDND1-213ENST00000506927 TTLL12Q14166 644 aaPredicted RBP8.26□□□□□ -1.09
CLDND1-213ENST00000506927 FAM217BQ9NTX9 383 aaPredicted RBP8.26□□□□□ -1.09
CLDND1-213ENST00000506927 SETD5Q9C0A6 1442 aa8.26□□□□□ -1.09
CLDND1-213ENST00000506927 CUX1P39880 1505 aa8.25□□□□□ -1.09
CLDND1-213ENST00000506927 NEFLP07196 543 aa8.25□□□□□ -1.09
CLDND1-213ENST00000506927 CD46P15529 392 aa8.25□□□□□ -1.09
CLDND1-213ENST00000506927 GCGRP47871 477 aa8.25□□□□□ -1.09
CLDND1-213ENST00000506927 COPS2P61201 443 aa8.25□□□□□ -1.09
CLDND1-213ENST00000506927 KCNC4Q03721 635 aa8.25□□□□□ -1.09
CLDND1-213ENST00000506927 PCDHB3Q9Y5E6 796 aa8.25□□□□□ -1.09
CLDND1-213ENST00000506927 ZNF516Q92618 1163 aa8.24□□□□□ -1.09
CLDND1-213ENST00000506927 IL21Q9HBE4 155 aa8.24□□□□□ -1.09
CLDND1-213ENST00000506927 EFCAB5A4FU69 1503 aa8.24□□□□□ -1.09
CLDND1-213ENST00000506927 TIAM1Q13009 1591 aa8.23□□□□□ -1.09
CLDND1-213ENST00000506927 PDE4DQ08499 809 aa8.23□□□□□ -1.09
CLDND1-213ENST00000506927 IFFO2Q5TF58 517 aa8.23□□□□□ -1.09
CLDND1-213ENST00000506927 BLOC1S3Q6QNY0 202 aa8.23□□□□□ -1.09
CLDND1-213ENST00000506927 GIGYF2Q6Y7W6 1299 aaKnown RBP8.23□□□□□ -1.09
CLDND1-213ENST00000506927 PARP9Q8IXQ6 854 aa8.23□□□□□ -1.09
CLDND1-213ENST00000506927 ARHGAP35Q9NRY4 1499 aa8.23□□□□□ -1.09
CLDND1-213ENST00000506927 CCER2I3L3R5 266 aa8.22□□□□□ -1.09
CLDND1-213ENST00000506927 SSTR3P32745 418 aaPredicted RBP8.22□□□□□ -1.09
CLDND1-213ENST00000506927 FUT2Q10981 343 aa8.22□□□□□ -1.09
CLDND1-213ENST00000506927 PUS10Q3MIT2 529 aaKnown RBP8.22□□□□□ -1.09
CLDND1-213ENST00000506927 TPRNQ4KMQ1 711 aa8.22□□□□□ -1.09
CLDND1-213ENST00000506927 CARMIL1Q5VZK9 1371 aa8.22□□□□□ -1.09
CLDND1-213ENST00000506927 AQRO60306 1485 aaKnown RBP eCLIP8.21□□□□□ -1.091e-6■■■■□ 26.1
CLDND1-213ENST00000506927 RANGAP1P46060 587 aaPredicted RBP8.21□□□□□ -1.1
CLDND1-213ENST00000506927 CADPSQ9ULU8 1353 aa8.21□□□□□ -1.1
CLDND1-213ENST00000506927 LRRC9Q6ZRR7 1453 aa8.2□□□□□ -1.1
CLDND1-213ENST00000506927 ZPR1O75312 459 aa8.2□□□□□ -1.1
CLDND1-213ENST00000506927 IGF1RP08069 1367 aa8.2□□□□□ -1.1
CLDND1-213ENST00000506927 RAB3GAP2Q9H2M9 1393 aa8.2□□□□□ -1.1
CLDND1-213ENST00000506927 ANP32CO43423 234 aa8.19□□□□□ -1.1
CLDND1-213ENST00000506927 ATP6V1AP38606 617 aa8.19□□□□□ -1.1
CLDND1-213ENST00000506927 KANK4Q5T7N3 995 aaPredicted RBP8.19□□□□□ -1.1
CLDND1-213ENST00000506927 NKX2-3Q8TAU0 364 aa8.19□□□□□ -1.1
CLDND1-213ENST00000506927 SUPT16HQ9Y5B9 1047 aaKnown RBP8.19□□□□□ -1.1
CLDND1-213ENST00000506927 FMN1Q68DA7 1419 aa8.19□□□□□ -1.1
CLDND1-213ENST00000506927 FYCO1Q9BQS8 1478 aa8.19□□□□□ -1.1
CLDND1-213ENST00000506927 CC2D2AQ9P2K1 1620 aa8.18□□□□□ -1.1
CLDND1-213ENST00000506927 CFAP43Q8NDM7 1665 aa8.18□□□□□ -1.1
CLDND1-213ENST00000506927 KDM4AO75164 1064 aa8.18□□□□□ -1.1
CLDND1-213ENST00000506927 MORN1Q5T089 497 aa8.18□□□□□ -1.1
CLDND1-213ENST00000506927 SCUBE3Q8IX30 993 aa8.18□□□□□ -1.1
CLDND1-213ENST00000506927 CUL7Q14999 1698 aa8.18□□□□□ -1.1
CLDND1-213ENST00000506927 NR1I2O75469 434 aa8.17□□□□□ -1.1
CLDND1-213ENST00000506927 MS4A1P11836 297 aa8.17□□□□□ -1.1
CLDND1-213ENST00000506927 ERICH6BQ5W0A0 696 aa8.17□□□□□ -1.1
CLDND1-213ENST00000506927 A0A0G2JS52 829 aa8.16□□□□□ -1.1
CLDND1-213ENST00000506927 FGD5Q6ZNL6 1462 aa8.16□□□□□ -1.1
CLDND1-213ENST00000506927 CASKIN1Q8WXD9 1431 aa8.16□□□□□ -1.1
CLDND1-213ENST00000506927 BEGAINQ9BUH8 593 aa8.16□□□□□ -1.1
CLDND1-213ENST00000506927 TLL1O43897 1013 aa8.15□□□□□ -1.1
CLDND1-213ENST00000506927 GRIPAP1Q4V328 841 aa8.15□□□□□ -1.1
CLDND1-213ENST00000506927 SLC27A5Q9Y2P5 690 aa8.15□□□□□ -1.1
CLDND1-213ENST00000506927 USP46P62068 366 aa8.14□□□□□ -1.11
CLDND1-213ENST00000506927 NUTM1Q86Y26 1132 aa8.14□□□□□ -1.11
CLDND1-213ENST00000506927 HLA-CQ95604 372 aa8.14□□□□□ -1.11
CLDND1-213ENST00000506927 TONSLQ96HA7 1378 aa8.13□□□□□ -1.11
CLDND1-213ENST00000506927 HOXA2O43364 376 aa8.13□□□□□ -1.11
CLDND1-213ENST00000506927 FAM50AQ14320 339 aaKnown RBP8.13□□□□□ -1.11
CLDND1-213ENST00000506927 SPIRE2Q8WWL2 714 aa8.13□□□□□ -1.11
CLDND1-213ENST00000506927 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
CLDND1-213ENST00000506927 THOC2Q8NI27 1593 aaKnown RBP8.13□□□□□ -1.11
CLDND1-213ENST00000506927 PPP1R15AO75807 674 aaPredicted RBP8.12□□□□□ -1.11
CLDND1-213ENST00000506927 RGS20O76081 388 aa8.12□□□□□ -1.11
CLDND1-213ENST00000506927 PRKCSHP14314 528 aaPredicted RBP8.12□□□□□ -1.11
CLDND1-213ENST00000506927 ITGAEP38570 1179 aa8.12□□□□□ -1.11
CLDND1-213ENST00000506927 PPP1R18Q6NYC8 613 aa8.12□□□□□ -1.11
CLDND1-213ENST00000506927 DNMBPQ6XZF7 1577 aa8.12□□□□□ -1.11
CLDND1-213ENST00000506927 ABCA10Q8WWZ4 1543 aa8.12□□□□□ -1.11
CLDND1-213ENST00000506927 ADH1BP00325 375 aa8.11□□□□□ -1.11
CLDND1-213ENST00000506927 GUCA2AQ02747 115 aa8.11□□□□□ -1.11
CLDND1-213ENST00000506927 THAP11Q96EK4 314 aa8.11□□□□□ -1.11
CLDND1-213ENST00000506927 SPSB2Q99619 263 aa8.11□□□□□ -1.11
CLDND1-213ENST00000506927 MAPKBP1O60336 1514 aa8.11□□□□□ -1.11
CLDND1-213ENST00000506927 KIF21AQ7Z4S6 1674 aa8.11□□□□□ -1.11
CLDND1-213ENST00000506927 FMNL1O95466 1100 aaPredicted RBP8.1□□□□□ -1.11
CLDND1-213ENST00000506927 BRICD5Q6PL45 260 aa8.1□□□□□ -1.11
CLDND1-213ENST00000506927 RNF19BQ6ZMZ0 732 aa8.1□□□□□ -1.11
CLDND1-213ENST00000506927 TBC1D2Q9BYX2 928 aa8.1□□□□□ -1.11
CLDND1-213ENST00000506927 KDM4CQ9H3R0 1056 aa8.1□□□□□ -1.11
CLDND1-213ENST00000506927 CTTNBP2Q8WZ74 1663 aa8.1□□□□□ -1.11
CLDND1-213ENST00000506927 UACAQ9BZF9 1416 aa8.1□□□□□ -1.11
CLDND1-213ENST00000506927 CCDC18Q5T9S5 1454 aa8.09□□□□□ -1.11
CLDND1-213ENST00000506927 MOXD2PA6NHM9 499 aa8.09□□□□□ -1.11
CLDND1-213ENST00000506927 NDUFV2P19404 249 aa8.09□□□□□ -1.11
CLDND1-213ENST00000506927 ANP32EQ9BTT0 268 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms