RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 RBM33Q96EV2 1170 aaKnown RBP10.5□□□□□ -0.73
GYPB-206ENST00000506516 TMEM94Q12767 1356 aa10.5□□□□□ -0.73
GYPB-206ENST00000506516 DHX57Q6P158 1386 aaKnown RBP10.5□□□□□ -0.73
GYPB-206ENST00000506516 KLHL34Q8N239 644 aa10.49□□□□□ -0.73
GYPB-206ENST00000506516 SIN3AQ96ST3 1273 aa10.49□□□□□ -0.73
GYPB-206ENST00000506516 C14orf93Q9H972 538 aaKnown RBP10.49□□□□□ -0.73
GYPB-206ENST00000506516 CLEC11AQ9Y240 323 aa10.49□□□□□ -0.73
GYPB-206ENST00000506516 NCOA3Q9Y6Q9 1424 aa10.49□□□□□ -0.73
GYPB-206ENST00000506516 NKTRP30414 1462 aaKnown RBP10.49□□□□□ -0.73
GYPB-206ENST00000506516 PIP4K2BP78356 416 aa10.48□□□□□ -0.73
GYPB-206ENST00000506516 ALKQ9UM73 1620 aa10.47□□□□□ -0.73
GYPB-206ENST00000506516 PPLO60437 1756 aa10.47□□□□□ -0.73
GYPB-206ENST00000506516 CFAP70Q5T0N1 1121 aa10.47□□□□□ -0.73
GYPB-206ENST00000506516 TMEM132EQ6IEE7 984 aa10.47□□□□□ -0.73
GYPB-206ENST00000506516 C19orf44Q9H6X5 657 aa10.47□□□□□ -0.73
GYPB-206ENST00000506516 MSH6P52701 1360 aa10.47□□□□□ -0.73
GYPB-206ENST00000506516 PTPRUQ92729 1446 aa10.47□□□□□ -0.73
GYPB-206ENST00000506516 STRCP1A6NGW2 1772 aa10.47□□□□□ -0.73
GYPB-206ENST00000506516 ATF3P18847 181 aa10.46□□□□□ -0.73
GYPB-206ENST00000506516 STK26Q9P289 416 aa10.46□□□□□ -0.73
GYPB-206ENST00000506516 PIK3C2GO75747 1445 aa10.46□□□□□ -0.74
GYPB-206ENST00000506516 MYOM2P54296 1465 aa10.46□□□□□ -0.74
GYPB-206ENST00000506516 NWD1Q149M9 1564 aa10.46□□□□□ -0.74
GYPB-206ENST00000506516 NRXN3Q9Y4C0 1643 aa10.46□□□□□ -0.74
GYPB-206ENST00000506516 CHD2O14647 1828 aaKnown RBP10.46□□□□□ -0.74
GYPB-206ENST00000506516 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
GYPB-206ENST00000506516 CADPS2Q86UW7 1296 aa10.45□□□□□ -0.74
GYPB-206ENST00000506516 L3MBTL2Q969R5 705 aa10.44□□□□□ -0.74
GYPB-206ENST00000506516 SIRT1Q96EB6 747 aa10.44□□□□□ -0.74
GYPB-206ENST00000506516 SLAIN2Q9P270 581 aa10.44□□□□□ -0.74
GYPB-206ENST00000506516 NRXN1Q9ULB1 1477 aa10.43□□□□□ -0.74
GYPB-206ENST00000506516 LRPPRCP42704 1394 aaKnown RBP10.43□□□□□ -0.74
GYPB-206ENST00000506516 ABCC11Q96J66 1382 aa10.43□□□□□ -0.74
GYPB-206ENST00000506516 SPOCK2Q92563 424 aa10.43□□□□□ -0.74
GYPB-206ENST00000506516 IFT172Q9UG01 1749 aa10.42□□□□□ -0.74
GYPB-206ENST00000506516 YTHDC2Q9H6S0 1430 aaKnown RBP10.41□□□□□ -0.74
GYPB-206ENST00000506516 POGKQ9P215 609 aa10.41□□□□□ -0.74
GYPB-206ENST00000506516 PTCH1Q13635 1447 aa10.41□□□□□ -0.74
GYPB-206ENST00000506516 TONSLQ96HA7 1378 aa10.4□□□□□ -0.74
GYPB-206ENST00000506516 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
GYPB-206ENST00000506516 WAPLQ7Z5K2 1190 aa10.4□□□□□ -0.74
GYPB-206ENST00000506516 TRAK1Q9UPV9 953 aa10.4□□□□□ -0.74
GYPB-206ENST00000506516 FAM135BQ49AJ0 1406 aa10.4□□□□□ -0.75
GYPB-206ENST00000506516 CLSPNQ9HAW4 1339 aa10.39□□□□□ -0.75
GYPB-206ENST00000506516 XRN1Q8IZH2 1706 aaKnown RBP10.39□□□□□ -0.75
GYPB-206ENST00000506516 CCER1Q8TC90 406 aaPredicted RBP10.39□□□□□ -0.75
GYPB-206ENST00000506516 ZBTB47Q9UFB7 747 aaPredicted RBP10.39□□□□□ -0.75
GYPB-206ENST00000506516 PRAG1Q86YV5 1406 aa10.39□□□□□ -0.75
GYPB-206ENST00000506516 LAMC1P11047 1609 aa10.38□□□□□ -0.75
GYPB-206ENST00000506516 HSPA1LP34931 641 aa10.38□□□□□ -0.75
GYPB-206ENST00000506516 PRAM1Q96QH2 718 aa10.38□□□□□ -0.75
GYPB-206ENST00000506516 TECPR2O15040 1411 aa10.38□□□□□ -0.75
GYPB-206ENST00000506516 DCCP43146 1447 aa10.38□□□□□ -0.75
GYPB-206ENST00000506516 SETD1AO15047 1707 aaKnown RBP10.38□□□□□ -0.75
GYPB-206ENST00000506516 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
GYPB-206ENST00000506516 PRKAR2AP13861 404 aaKnown RBP10.37□□□□□ -0.75
GYPB-206ENST00000506516 NBPF1Q3BBV0 1214 aa10.37□□□□□ -0.75
GYPB-206ENST00000506516 ADGRL3Q9HAR2 1447 aa10.37□□□□□ -0.75
GYPB-206ENST00000506516 XIRP1Q702N8 1843 aaKnown RBP10.37□□□□□ -0.75
GYPB-206ENST00000506516 SAFB2Q14151 953 aaKnown RBP eCLIP10.36□□□□□ -0.75
GYPB-206ENST00000506516 TIMELESSQ9UNS1 1208 aa10.36□□□□□ -0.75
GYPB-206ENST00000506516 PLEKHH1Q9ULM0 1364 aa10.35□□□□□ -0.75
GYPB-206ENST00000506516 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.35□□□□□ -0.75
GYPB-206ENST00000506516 ASXL1Q8IXJ9 1541 aa10.34□□□□□ -0.75
GYPB-206ENST00000506516 BRINP3Q76B58 766 aa10.34□□□□□ -0.75
GYPB-206ENST00000506516 ADGRB1O14514 1584 aa10.34□□□□□ -0.75
GYPB-206ENST00000506516 NBPF8Q3BBV2 869 aa10.33□□□□□ -0.76
GYPB-206ENST00000506516 ESCO1Q5FWF5 840 aa10.33□□□□□ -0.76
GYPB-206ENST00000506516 DLC1Q96QB1 1528 aa10.33□□□□□ -0.76
GYPB-206ENST00000506516 MST1RQ04912 1400 aa10.33□□□□□ -0.76
GYPB-206ENST00000506516 ROCK2O75116 1388 aaKnown RBP10.32□□□□□ -0.76
GYPB-206ENST00000506516 NUTM2FA1L443 756 aa10.32□□□□□ -0.76
GYPB-206ENST00000506516 MINK1Q8N4C8 1332 aaPredicted RBP10.32□□□□□ -0.76
GYPB-206ENST00000506516 C1orf167Q5SNV9 1468 aa10.31□□□□□ -0.76
GYPB-206ENST00000506516 KNDC1Q76NI1 1749 aa10.31□□□□□ -0.76
GYPB-206ENST00000506516 KIAA1210Q9ULL0 1709 aa10.31□□□□□ -0.76
GYPB-206ENST00000506516 ORAI2Q96SN7 254 aa10.31□□□□□ -0.76
GYPB-206ENST00000506516 HIRIP3Q9BW71 556 aaPredicted RBP10.31□□□□□ -0.76
GYPB-206ENST00000506516 CARD11Q9BXL7 1154 aa10.31□□□□□ -0.76
GYPB-206ENST00000506516 WASLO00401 505 aaPredicted RBP10.3□□□□□ -0.76
GYPB-206ENST00000506516 ROBO1Q9Y6N7 1651 aa10.3□□□□□ -0.76
GYPB-206ENST00000506516 CENPJQ9HC77 1338 aaPredicted RBP10.3□□□□□ -0.76
GYPB-206ENST00000506516 HAX1O00165 279 aa10.29□□□□□ -0.76
GYPB-206ENST00000506516 LRRC59Q96AG4 307 aaKnown RBP10.29□□□□□ -0.76
GYPB-206ENST00000506516 CREBZFQ9NS37 354 aa10.29□□□□□ -0.76
GYPB-206ENST00000506516 NALCNQ8IZF0 1738 aa10.29□□□□□ -0.76
GYPB-206ENST00000506516 EIF3AQ14152 1382 aaKnown RBP10.28□□□□□ -0.76
GYPB-206ENST00000506516 CDC42BPGQ6DT37 1551 aa10.28□□□□□ -0.76
GYPB-206ENST00000506516 CHADLQ6NUI6 762 aa10.28□□□□□ -0.76
GYPB-206ENST00000506516 CDK19Q9BWU1 502 aa10.28□□□□□ -0.76
GYPB-206ENST00000506516 PHF8Q9UPP1 1060 aa10.28□□□□□ -0.76
GYPB-206ENST00000506516 NPHP3Q7Z494 1330 aa10.28□□□□□ -0.76
GYPB-206ENST00000506516 FOXO3O43524 673 aa10.27□□□□□ -0.77
GYPB-206ENST00000506516 DDX17Q92841 729 aaKnown RBP10.27□□□□□ -0.77
GYPB-206ENST00000506516 GPRASP1Q5JY77 1395 aa10.26□□□□□ -0.77
GYPB-206ENST00000506516 JCADQ9P266 1359 aa10.26□□□□□ -0.77
GYPB-206ENST00000506516 SLC24A1O60721 1099 aa10.26□□□□□ -0.77
GYPB-206ENST00000506516 SRPK2P78362 688 aaKnown RBP10.26□□□□□ -0.77
GYPB-206ENST00000506516 PSME1Q06323 249 aa10.26□□□□□ -0.77
GYPB-206ENST00000506516 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms