RNA–Protein interactions for RNA: ENST00000506396.1

CDH6-203, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-203ENST00000506396 WWC1Q8IX03 1113 aa22.8■■□□□ 1.24
CDH6-203ENST00000506396 IQGAP3Q86VI3 1631 aa22.8■■□□□ 1.24
CDH6-203ENST00000506396 TERF1P54274 439 aa22.79■■□□□ 1.24
CDH6-203ENST00000506396 CCDC173Q0VFZ6 552 aa22.79■■□□□ 1.24
CDH6-203ENST00000506396 SYCP2Q9BX26 1530 aa22.79■■□□□ 1.24
CDH6-203ENST00000506396 IQGAP1P46940 1657 aa22.79■■□□□ 1.24
CDH6-203ENST00000506396 TNNQ9UQP3 1299 aa22.78■■□□□ 1.24
CDH6-203ENST00000506396 PLXNC1O60486 1568 aa22.78■■□□□ 1.24
CDH6-203ENST00000506396 CDC42BPBQ9Y5S2 1711 aa22.78■■□□□ 1.24
CDH6-203ENST00000506396 NEUROD2Q15784 382 aa22.78■■□□□ 1.24
CDH6-203ENST00000506396 NGEFQ8N5V2 710 aa22.78■■□□□ 1.24
CDH6-203ENST00000506396 RLBP1P12271 317 aa22.77■■□□□ 1.24
CDH6-203ENST00000506396 ATP10AO60312 1499 aa22.77■■□□□ 1.24
CDH6-203ENST00000506396 SCAF11Q99590 1463 aaKnown RBP22.76■■□□□ 1.23
CDH6-203ENST00000506396 MYOM1P52179 1685 aa22.76■■□□□ 1.23
CDH6-203ENST00000506396 BCL2L13Q9BXK5 485 aa22.76■■□□□ 1.23
CDH6-203ENST00000506396 MADDQ8WXG6 1647 aa22.75■■□□□ 1.23
CDH6-203ENST00000506396 UQCRHLA0A096LP55 91 aa22.75■■□□□ 1.23
CDH6-203ENST00000506396 UQCRHP07919 91 aa22.75■■□□□ 1.23
CDH6-203ENST00000506396 RARSP54136 660 aaKnown RBP22.75■■□□□ 1.23
CDH6-203ENST00000506396 PREX2Q70Z35 1606 aa22.75■■□□□ 1.23
CDH6-203ENST00000506396 ANP32BQ92688 251 aaKnown RBP22.75■■□□□ 1.23
CDH6-203ENST00000506396 NASPP49321 788 aaPredicted RBP22.74■■□□□ 1.23
CDH6-203ENST00000506396 PPP1R9BQ96SB3 815 aa22.74■■□□□ 1.23
CDH6-203ENST00000506396 ZMYM3Q14202 1370 aa22.74■■□□□ 1.23
CDH6-203ENST00000506396 RRP7AQ9Y3A4 280 aaKnown RBP22.73■■□□□ 1.23
CDH6-203ENST00000506396 MFAP1P55081 439 aaKnown RBP22.72■■□□□ 1.23
CDH6-203ENST00000506396 RWDD1Q9H446 243 aaPredicted RBP22.72■■□□□ 1.23
CDH6-203ENST00000506396 C22orf23Q9BZE7 217 aa22.72■■□□□ 1.23
CDH6-203ENST00000506396 BBXQ8WY36 941 aaPredicted RBP22.71■■□□□ 1.23
CDH6-203ENST00000506396 HSCBQ8IWL3 235 aa22.7■■□□□ 1.22
CDH6-203ENST00000506396 ZNF692Q9BU19 519 aaPredicted RBP22.7■■□□□ 1.22
CDH6-203ENST00000506396 MAST1Q9Y2H9 1570 aa22.7■■□□□ 1.22
CDH6-203ENST00000506396 MTERF4Q7Z6M4 381 aaKnown RBP22.7■■□□□ 1.22
CDH6-203ENST00000506396 TNPO1Q92973 898 aaKnown RBP22.69■■□□□ 1.22
CDH6-203ENST00000506396 ARHGAP5Q13017 1502 aa22.69■■□□□ 1.22
CDH6-203ENST00000506396 CARD14Q9BXL6 1004 aa22.67■■□□□ 1.22
CDH6-203ENST00000506396 KDM5AP29375 1690 aaKnown RBP22.67■■□□□ 1.22
CDH6-203ENST00000506396 SKOR2Q2VWA4 1001 aaPredicted RBP22.67■■□□□ 1.22
CDH6-203ENST00000506396 XPCQ01831 940 aaPredicted RBP22.67■■□□□ 1.22
CDH6-203ENST00000506396 DMTNQ08495 405 aa22.67■■□□□ 1.22
CDH6-203ENST00000506396 GBP4Q96PP9 640 aa22.67■■□□□ 1.22
CDH6-203ENST00000506396 SCAPERQ9BY12 1400 aa22.66■■□□□ 1.22
CDH6-203ENST00000506396 RTEL1-TNFRSF6BF6WH68 1400 aa22.66■■□□□ 1.22
CDH6-203ENST00000506396 BCL11BQ9C0K0 894 aaPredicted RBP22.66■■□□□ 1.22
CDH6-203ENST00000506396 UTP14CQ5TAP6 766 aaKnown RBP22.65■■□□□ 1.22
CDH6-203ENST00000506396 DUOX2Q9NRD8 1548 aa22.64■■□□□ 1.22
CDH6-203ENST00000506396 POLR3AO14802 1390 aaPredicted RBP22.64■■□□□ 1.21
CDH6-203ENST00000506396 DYNC1I1O14576 645 aa22.63■■□□□ 1.21
CDH6-203ENST00000506396 TCP11L2Q8N4U5 519 aa22.63■■□□□ 1.21
CDH6-203ENST00000506396 TNNT2P45379 298 aaPredicted RBP22.63■■□□□ 1.21
CDH6-203ENST00000506396 RUNDC1Q96C34 613 aa22.62■■□□□ 1.21
CDH6-203ENST00000506396 CEP152O94986 1710 aa22.62■■□□□ 1.21
CDH6-203ENST00000506396 SPHKAPQ2M3C7 1700 aa22.61■■□□□ 1.21
CDH6-203ENST00000506396 MVPQ14764 893 aaKnown RBP22.61■■□□□ 1.21
CDH6-203ENST00000506396 GTF2E1P29083 439 aaPredicted RBP22.6■■□□□ 1.21
CDH6-203ENST00000506396 TTC37Q6PGP7 1564 aa22.6■■□□□ 1.21
CDH6-203ENST00000506396 ZSCAN20P17040 1043 aaPredicted RBP22.6■■□□□ 1.21
CDH6-203ENST00000506396 DDIT3P35638 169 aa22.59■■□□□ 1.21
CDH6-203ENST00000506396 FTSJ3Q8IY81 847 aaKnown RBP22.59■■□□□ 1.21
CDH6-203ENST00000506396 CCDC94Q9BW85 323 aaPredicted RBP22.59■■□□□ 1.21
CDH6-203ENST00000506396 ERVK-7P63135 1459 aa22.59■■□□□ 1.21
CDH6-203ENST00000506396 ZNF500O60304 480 aaPredicted RBP22.58■■□□□ 1.21
CDH6-203ENST00000506396 NOL7Q9UMY1 257 aaKnown RBP22.58■■□□□ 1.21
CDH6-203ENST00000506396 NCLP19338 710 aaKnown RBP22.58■■□□□ 1.2
CDH6-203ENST00000506396 WDR63Q8IWG1 891 aa22.58■■□□□ 1.2
CDH6-203ENST00000506396 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
CDH6-203ENST00000506396 PTMSP20962 102 aa22.56■■□□□ 1.2
CDH6-203ENST00000506396 MORC1Q86VD1 984 aa22.56■■□□□ 1.2
CDH6-203ENST00000506396 RAB3GAP1Q15042 981 aa22.55■■□□□ 1.2
CDH6-203ENST00000506396 ZKSCAN2Q63HK3 967 aa22.55■■□□□ 1.2
CDH6-203ENST00000506396 PHF23Q9BUL5 403 aaPredicted RBP22.55■■□□□ 1.2
CDH6-203ENST00000506396 IQSEC2Q5JU85 1478 aa22.55■■□□□ 1.2
CDH6-203ENST00000506396 DZIP1LQ8IYY4 767 aaKnown RBP22.55■■□□□ 1.2
CDH6-203ENST00000506396 STAC3Q96MF2 364 aa22.55■■□□□ 1.2
CDH6-203ENST00000506396 HSP90AB1P08238 724 aaKnown RBP22.55■■□□□ 1.2
CDH6-203ENST00000506396 HS1BP3Q53T59 392 aa22.55■■□□□ 1.2
CDH6-203ENST00000506396 CFAP70Q5T0N1 1121 aa22.55■■□□□ 1.2
CDH6-203ENST00000506396 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.55■■□□□ 1.2
CDH6-203ENST00000506396 PPP4R3BQ5MIZ7 849 aa22.54■■□□□ 1.2
CDH6-203ENST00000506396 SHPRHQ149N8 1683 aa22.54■■□□□ 1.2
CDH6-203ENST00000506396 NCOA3Q9Y6Q9 1424 aa22.54■■□□□ 1.2
CDH6-203ENST00000506396 TRPM2O94759 1503 aa22.53■■□□□ 1.2
CDH6-203ENST00000506396 FOXD4L1Q9NU39 408 aa22.53■■□□□ 1.2
CDH6-203ENST00000506396 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.53■■□□□ 1.2
CDH6-203ENST00000506396 PDIA4P13667 645 aaKnown RBP22.53■■□□□ 1.2
CDH6-203ENST00000506396 CSPP1Q1MSJ5 1256 aa22.53■■□□□ 1.2
CDH6-203ENST00000506396 CIZ1Q9ULV3 898 aaPredicted RBP22.53■■□□□ 1.2
CDH6-203ENST00000506396 SASS6Q6UVJ0 657 aa22.52■■□□□ 1.2
CDH6-203ENST00000506396 DDX49Q9Y6V7 483 aaKnown RBP22.52■■□□□ 1.2
CDH6-203ENST00000506396 SMC5Q8IY18 1101 aa22.51■■□□□ 1.19
CDH6-203ENST00000506396 NAP1L2Q9ULW6 460 aaPredicted RBP22.51■■□□□ 1.19
CDH6-203ENST00000506396 CLTCL1P53675 1640 aa22.51■■□□□ 1.19
CDH6-203ENST00000506396 NSD3Q9BZ95 1437 aa22.5■■□□□ 1.19
CDH6-203ENST00000506396 GOLGA6L22H0YM25 854 aa22.49■■□□□ 1.19
CDH6-203ENST00000506396 ITPRIPQ8IWB1 547 aa22.49■■□□□ 1.19
CDH6-203ENST00000506396 ZKSCAN5Q9Y2L8 839 aa22.49■■□□□ 1.19
CDH6-203ENST00000506396 CHMP4BQ9H444 224 aaKnown RBP22.48■■□□□ 1.19
CDH6-203ENST00000506396 CBX1P83916 185 aa22.48■■□□□ 1.19
CDH6-203ENST00000506396 HDAC1Q13547 482 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms