RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 IFNLR1Q8IU57 520 aaPredicted RBP14□□□□□ -0.17
DHFR-202ENST00000504396 TMEM131LA2VDJ0 1609 aa14□□□□□ -0.17
DHFR-202ENST00000504396 COL16A1Q07092 1604 aaPredicted RBP13.99□□□□□ -0.17
DHFR-202ENST00000504396 CCDC61Q9Y6R9 512 aa13.98□□□□□ -0.17
DHFR-202ENST00000504396 UNC13BO14795 1591 aa13.97□□□□□ -0.17
DHFR-202ENST00000504396 NCOA3Q9Y6Q9 1424 aa13.97□□□□□ -0.17
DHFR-202ENST00000504396 ATF3P18847 181 aa13.97□□□□□ -0.17
DHFR-202ENST00000504396 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
DHFR-202ENST00000504396 E9PCH4 1651 aa13.96□□□□□ -0.17
DHFR-202ENST00000504396 DIP2AQ14689 1571 aa13.96□□□□□ -0.18
DHFR-202ENST00000504396 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.95□□□□□ -0.18
DHFR-202ENST00000504396 LRP6O75581 1613 aa13.95□□□□□ -0.18
DHFR-202ENST00000504396 CLCN6P51797 869 aa13.95□□□□□ -0.18
DHFR-202ENST00000504396 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
DHFR-202ENST00000504396 CADPS2Q86UW7 1296 aa13.94□□□□□ -0.18
DHFR-202ENST00000504396 TBX22Q9Y458 520 aa13.94□□□□□ -0.18
DHFR-202ENST00000504396 SPATA31A6Q5VVP1 1343 aa13.94□□□□□ -0.18
DHFR-202ENST00000504396 TRPM2O94759 1503 aa13.94□□□□□ -0.18
DHFR-202ENST00000504396 FAM212AQ96EL1 285 aa13.93□□□□□ -0.18
DHFR-202ENST00000504396 AHDC1Q5TGY3 1603 aaPredicted RBP13.93□□□□□ -0.18
DHFR-202ENST00000504396 SHPRHQ149N8 1683 aa13.93□□□□□ -0.18
DHFR-202ENST00000504396 NUTM2BA6NNL0 878 aaPredicted RBP13.92□□□□□ -0.18
DHFR-202ENST00000504396 NUTM2EB1AL46 878 aaPredicted RBP13.92□□□□□ -0.18
DHFR-202ENST00000504396 ZNF772Q68DY9 489 aaPredicted RBP13.92□□□□□ -0.18
DHFR-202ENST00000504396 NUTM2AQ8IVF1 878 aaPredicted RBP13.92□□□□□ -0.18
DHFR-202ENST00000504396 ADAMTS13Q76LX8 1427 aa13.92□□□□□ -0.18
DHFR-202ENST00000504396 IQGAP3Q86VI3 1631 aa13.91□□□□□ -0.18
DHFR-202ENST00000504396 PIK3R4Q99570 1358 aa13.91□□□□□ -0.18
DHFR-202ENST00000504396 GALR2O43603 387 aaPredicted RBP13.91□□□□□ -0.18
DHFR-202ENST00000504396 C19orf44Q9H6X5 657 aa13.91□□□□□ -0.18
DHFR-202ENST00000504396 ROCK1Q13464 1354 aa13.91□□□□□ -0.18
DHFR-202ENST00000504396 ITGAEP38570 1179 aa13.9□□□□□ -0.19
DHFR-202ENST00000504396 AMOTL2Q9Y2J4 779 aa13.9□□□□□ -0.19
DHFR-202ENST00000504396 NUP155O75694 1391 aa13.88□□□□□ -0.19
DHFR-202ENST00000504396 DCAF8Q5TAQ9 597 aa13.88□□□□□ -0.19
DHFR-202ENST00000504396 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
DHFR-202ENST00000504396 BRINP3Q76B58 766 aa13.87□□□□□ -0.19
DHFR-202ENST00000504396 ASXL1Q8IXJ9 1541 aa13.86□□□□□ -0.19
DHFR-202ENST00000504396 RXRBP28702 533 aa13.86□□□□□ -0.19
DHFR-202ENST00000504396 SPOCK2Q92563 424 aa13.86□□□□□ -0.19
DHFR-202ENST00000504396 PTPRUQ92729 1446 aa13.86□□□□□ -0.19
DHFR-202ENST00000504396 SPHKAPQ2M3C7 1700 aa13.85□□□□□ -0.19
DHFR-202ENST00000504396 UPF1Q92900 1129 aaKnown RBP eCLIP13.85□□□□□ -0.191e-6■■□□□ 13.6
DHFR-202ENST00000504396 KIF12Q96FN5 646 aa13.85□□□□□ -0.19
DHFR-202ENST00000504396 MS4A3Q96HJ5 214 aa13.85□□□□□ -0.19
DHFR-202ENST00000504396 XRN1Q8IZH2 1706 aaKnown RBP13.85□□□□□ -0.19
DHFR-202ENST00000504396 DCCP43146 1447 aa13.84□□□□□ -0.19
DHFR-202ENST00000504396 NRXN3Q9Y4C0 1643 aa13.84□□□□□ -0.19
DHFR-202ENST00000504396 AFF2P51816 1311 aa13.84□□□□□ -0.19
DHFR-202ENST00000504396 NHSL1Q5SYE7 1610 aa13.83□□□□□ -0.2
DHFR-202ENST00000504396 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.2
DHFR-202ENST00000504396 MST1RQ04912 1400 aa13.82□□□□□ -0.2
DHFR-202ENST00000504396 MAP3K13O43283 966 aa13.81□□□□□ -0.2
DHFR-202ENST00000504396 C8orf37Q96NL8 207 aa13.81□□□□□ -0.2
DHFR-202ENST00000504396 POTEIP0CG38 1075 aa13.81□□□□□ -0.2
DHFR-202ENST00000504396 DCBLD2Q96PD2 775 aa13.81□□□□□ -0.2
DHFR-202ENST00000504396 NALCNQ8IZF0 1738 aa13.8□□□□□ -0.2
DHFR-202ENST00000504396 METP08581 1390 aa13.8□□□□□ -0.2
DHFR-202ENST00000504396 DDX17Q92841 729 aaKnown RBP13.8□□□□□ -0.2
DHFR-202ENST00000504396 LRRC59Q96AG4 307 aaKnown RBP13.8□□□□□ -0.2
DHFR-202ENST00000504396 SETD5Q9C0A6 1442 aa13.79□□□□□ -0.2
DHFR-202ENST00000504396 CDK12Q9NYV4 1490 aaPredicted RBP13.79□□□□□ -0.2
DHFR-202ENST00000504396 ADGRL3Q9HAR2 1447 aa13.79□□□□□ -0.2
DHFR-202ENST00000504396 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
DHFR-202ENST00000504396 CLTCL1P53675 1640 aa13.77□□□□□ -0.2
DHFR-202ENST00000504396 ADAMTS2O95450 1211 aa13.77□□□□□ -0.21
DHFR-202ENST00000504396 GSE1Q14687 1217 aa13.77□□□□□ -0.21
DHFR-202ENST00000504396 KIF1BO60333 1816 aa13.76□□□□□ -0.21
DHFR-202ENST00000504396 PNPLA6Q8IY17 1366 aa13.76□□□□□ -0.21
DHFR-202ENST00000504396 RGS12O14924 1447 aa13.76□□□□□ -0.21
DHFR-202ENST00000504396 PYGBP11216 843 aa13.76□□□□□ -0.21
DHFR-202ENST00000504396 NEXMIFQ5QGS0 1516 aa13.76□□□□□ -0.21
DHFR-202ENST00000504396 NGLY1Q96IV0 654 aa13.75□□□□□ -0.21
DHFR-202ENST00000504396 QTRT2Q9H974 415 aaKnown RBP13.75□□□□□ -0.21
DHFR-202ENST00000504396 RBM6P78332 1123 aaKnown RBP13.74□□□□□ -0.21
DHFR-202ENST00000504396 CIZ1Q9ULV3 898 aaPredicted RBP13.73□□□□□ -0.21
DHFR-202ENST00000504396 PCDHB13Q9Y5F0 798 aa13.73□□□□□ -0.21
DHFR-202ENST00000504396 C1orf167Q5SNV9 1468 aa13.72□□□□□ -0.21
DHFR-202ENST00000504396 TRPC6Q9Y210 931 aa13.71□□□□□ -0.22
DHFR-202ENST00000504396 PTCH1Q13635 1447 aa13.7□□□□□ -0.22
DHFR-202ENST00000504396 LAMC1P11047 1609 aa13.7□□□□□ -0.22
DHFR-202ENST00000504396 ATAD2Q6PL18 1390 aa13.69□□□□□ -0.22
DHFR-202ENST00000504396 ORAI2Q96SN7 254 aa13.69□□□□□ -0.22
DHFR-202ENST00000504396 USP21Q9UK80 565 aa13.69□□□□□ -0.22
DHFR-202ENST00000504396 PRAG1Q86YV5 1406 aa13.68□□□□□ -0.22
DHFR-202ENST00000504396 ROBO2Q9HCK4 1378 aa13.68□□□□□ -0.22
DHFR-202ENST00000504396 VGFO15240 615 aaPredicted RBP13.68□□□□□ -0.22
DHFR-202ENST00000504396 IFNL1Q8IU54 200 aa13.68□□□□□ -0.22
DHFR-202ENST00000504396 SGIP1Q9BQI5 828 aa13.68□□□□□ -0.22
DHFR-202ENST00000504396 TRPC5Q9UL62 973 aaPredicted RBP13.66□□□□□ -0.22
DHFR-202ENST00000504396 SOS2Q07890 1332 aaPredicted RBP13.66□□□□□ -0.22
DHFR-202ENST00000504396 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
DHFR-202ENST00000504396 PPLO60437 1756 aa13.64□□□□□ -0.23
DHFR-202ENST00000504396 HFM1A2PYH4 1435 aa13.64□□□□□ -0.23
DHFR-202ENST00000504396 RRBP1Q9P2E9 1410 aaKnown RBP13.64□□□□□ -0.23
DHFR-202ENST00000504396 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
DHFR-202ENST00000504396 NAIPQ13075 1403 aa13.63□□□□□ -0.23
DHFR-202ENST00000504396 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
DHFR-202ENST00000504396 NPHP3Q7Z494 1330 aa13.63□□□□□ -0.23
DHFR-202ENST00000504396 ATMINO43313 823 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms