RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 GGNBP2Q9H3C7 697 aa8.72□□□□□ -1.01
SYNPO2-205ENST00000504178 GPRASP1Q5JY77 1395 aa8.72□□□□□ -1.01
SYNPO2-205ENST00000504178 AQRO60306 1485 aaKnown RBP eCLIP8.72□□□□□ -1.01
SYNPO2-205ENST00000504178 WASHC4Q2M389 1173 aa8.72□□□□□ -1.01
SYNPO2-205ENST00000504178 CNKSR2Q8WXI2 1034 aa8.71□□□□□ -1.01
SYNPO2-205ENST00000504178 KIF6Q6ZMV9 814 aa8.71□□□□□ -1.01
SYNPO2-205ENST00000504178 SMC3Q9UQE7 1217 aa8.71□□□□□ -1.02
SYNPO2-205ENST00000504178 ZNF644Q9H582 1327 aaPredicted RBP8.71□□□□□ -1.02
SYNPO2-205ENST00000504178 ZNF592Q92610 1267 aa8.71□□□□□ -1.02
SYNPO2-205ENST00000504178 KRI1Q8N9T8 703 aaKnown RBP8.7□□□□□ -1.02
SYNPO2-205ENST00000504178 UBTFL1P0CB47 393 aaPredicted RBP8.7□□□□□ -1.02
SYNPO2-205ENST00000504178 VPS37CA5D8V6 355 aaPredicted RBP8.7□□□□□ -1.02
SYNPO2-205ENST00000504178 SAFBQ15424 915 aaKnown RBP eCLIP8.7□□□□□ -1.02
SYNPO2-205ENST00000504178 ESCO1Q5FWF5 840 aa8.7□□□□□ -1.02
SYNPO2-205ENST00000504178 BRMS1Q9HCU9 246 aa8.7□□□□□ -1.02
SYNPO2-205ENST00000504178 CNTLNQ9NXG0 1405 aa8.7□□□□□ -1.02
SYNPO2-205ENST00000504178 IPO7O95373 1038 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 TMEM132EQ6IEE7 984 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 RALYLQ86SE5 291 aaKnown RBP8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 NLRP6P59044 892 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 CCDC7Q96M83 1385 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 NCOA2Q15596 1464 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 SETQ01105 290 aaPredicted RBP8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 WASHC2AQ641Q2 1341 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 IGF1RP08069 1367 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 ANKRD50Q9ULJ7 1429 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 STAC3Q96MF2 364 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 LRRC9Q6ZRR7 1453 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 SASS6Q6UVJ0 657 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 ABTB2Q8N961 1025 aa8.69□□□□□ -1.02
SYNPO2-205ENST00000504178 GPS2Q13227 327 aa8.68□□□□□ -1.02
SYNPO2-205ENST00000504178 CNTROBQ8N137 903 aa8.68□□□□□ -1.02
SYNPO2-205ENST00000504178 SYNJ2O15056 1496 aa8.68□□□□□ -1.02
SYNPO2-205ENST00000504178 FAM177BA6PVY3 158 aa8.68□□□□□ -1.02
SYNPO2-205ENST00000504178 RBM42Q9BTD8 480 aaKnown RBP8.68□□□□□ -1.02
SYNPO2-205ENST00000504178 MTMR7Q9Y216 660 aa8.68□□□□□ -1.02
SYNPO2-205ENST00000504178 KIF21BO75037 1637 aa8.68□□□□□ -1.02
SYNPO2-205ENST00000504178 KDM4AO75164 1064 aa8.68□□□□□ -1.02
SYNPO2-205ENST00000504178 CCDC30Q5VVM6 783 aa8.68□□□□□ -1.02
SYNPO2-205ENST00000504178 KIF7Q2M1P5 1343 aa8.68□□□□□ -1.02
SYNPO2-205ENST00000504178 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 LNPKQ9C0E8 428 aa8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 GAS2L2Q8NHY3 880 aa8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 CDC45O75419 566 aa8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 CASKIN1Q8WXD9 1431 aa8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 DNAJC2Q99543 621 aaKnown RBP8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 FSD1Q9BTV5 496 aa8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 GRIN2BQ13224 1484 aa8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 PSMA5P28066 241 aa8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 IKQ13123 557 aaPredicted RBP8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 PANK1Q8TE04 598 aa8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 TBC1D2BQ9UPU7 963 aa8.67□□□□□ -1.02
SYNPO2-205ENST00000504178 NAP1L1P55209 391 aaKnown RBP8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 CCDC73Q6ZRK6 1079 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 STRN4Q9NRL3 753 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 XBP1P17861 261 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 GSE1Q14687 1217 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 CHMP5Q9NZZ3 219 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 DCAF8L1A6NGE4 600 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 TTC39AQ5SRH9 613 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 PROSER2Q86WR7 435 aaPredicted RBP8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 HOMER1Q86YM7 354 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 FBXO3Q9UK99 471 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 EPS15P42566 896 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 TXNDC2Q86VQ3 553 aa8.66□□□□□ -1.02
SYNPO2-205ENST00000504178 OLFM4Q6UX06 510 aa8.65□□□□□ -1.02
SYNPO2-205ENST00000504178 PRG4Q92954 1404 aaPredicted RBP8.65□□□□□ -1.02
SYNPO2-205ENST00000504178 PATL2C9JE40 543 aaKnown RBP8.65□□□□□ -1.02
SYNPO2-205ENST00000504178 NUCB2P80303 420 aa8.65□□□□□ -1.02
SYNPO2-205ENST00000504178 CT47A1Q5JQC4 288 aaPredicted RBP8.65□□□□□ -1.03
SYNPO2-205ENST00000504178 C22orf23Q9BZE7 217 aa8.65□□□□□ -1.03
SYNPO2-205ENST00000504178 TATP17735 454 aaPredicted RBP8.65□□□□□ -1.03
SYNPO2-205ENST00000504178 SLC3A2P08195 630 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 SART3Q15020 963 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 EHBP1L1Q8N3D4 1523 aa8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 PRAM1Q96QH2 718 aa8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 SCAPERQ9BY12 1400 aa8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 MTHFSP49914 203 aa8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 AAMPQ13685 434 aa8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 HECW1Q76N89 1606 aa8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 ODF2Q5BJF6 829 aa8.64□□□□□ -1.03
SYNPO2-205ENST00000504178 BRD4O60885 1362 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 CNNM1Q9NRU3 951 aa8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 R3HCC1Q9Y3T6 440 aaKnown RBP8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 MRC2Q9UBG0 1479 aa8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 GNAI3P08754 354 aa8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 CABP4P57796 275 aa8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 TMEM132AQ24JP5 1023 aa8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 NUTM2BA6NNL0 878 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 NUTM2EB1AL46 878 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 NUTM2AQ8IVF1 878 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 PRKAR2BP31323 418 aa8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 ERC1Q8IUD2 1116 aa8.63□□□□□ -1.03
SYNPO2-205ENST00000504178 HIP1O00291 1037 aa8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 NAT10Q9H0A0 1025 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 CFAP70Q5T0N1 1121 aa8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 CDK19Q9BWU1 502 aa8.62□□□□□ -1.03
SYNPO2-205ENST00000504178 SURF6O75683 361 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms