RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 ATN1P54259 1190 aaPredicted RBP15.98■□□□□ 0.15
CDK11A-222ENST00000498810 KIF1BO60333 1816 aa15.97■□□□□ 0.15
CDK11A-222ENST00000498810 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
CDK11A-222ENST00000498810 LTKP29376 864 aa15.94■□□□□ 0.14
CDK11A-222ENST00000498810 UBAP1LF5GYI3 381 aa15.93■□□□□ 0.14
CDK11A-222ENST00000498810 HDGFP51858 240 aaKnown RBP15.93■□□□□ 0.14
CDK11A-222ENST00000498810 RIMS2Q9UQ26 1411 aa15.93■□□□□ 0.14
CDK11A-222ENST00000498810 TTLL13PA6NNM8 815 aa15.92■□□□□ 0.14
CDK11A-222ENST00000498810 SLC39A7Q92504 469 aa15.92■□□□□ 0.14
CDK11A-222ENST00000498810 CLTCL1P53675 1640 aa15.91■□□□□ 0.14
CDK11A-222ENST00000498810 TRPM2O94759 1503 aa15.91■□□□□ 0.14
CDK11A-222ENST00000498810 C7P10643 843 aa15.91■□□□□ 0.14
CDK11A-222ENST00000498810 CHRM1P11229 460 aaPredicted RBP15.91■□□□□ 0.14
CDK11A-222ENST00000498810 ZNF326Q5BKZ1 582 aaKnown RBP15.9■□□□□ 0.14
CDK11A-222ENST00000498810 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.89■□□□□ 0.13
CDK11A-222ENST00000498810 METRNQ9UJH8 293 aa15.89■□□□□ 0.13
CDK11A-222ENST00000498810 ZFYVE9O95405 1425 aa15.88■□□□□ 0.13
CDK11A-222ENST00000498810 POTEB2H3BUK9 544 aa15.87■□□□□ 0.13
CDK11A-222ENST00000498810 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
CDK11A-222ENST00000498810 DIP2AQ14689 1571 aa15.87■□□□□ 0.13
CDK11A-222ENST00000498810 PLEKHG1Q9ULL1 1385 aa15.87■□□□□ 0.13
CDK11A-222ENST00000498810 LRRC7Q96NW7 1537 aa15.86■□□□□ 0.13
CDK11A-222ENST00000498810 TOM1O60784 492 aa15.86■□□□□ 0.13
CDK11A-222ENST00000498810 XIRP1Q702N8 1843 aaKnown RBP15.85■□□□□ 0.13
CDK11A-222ENST00000498810 PIP4K2BP78356 416 aa15.85■□□□□ 0.13
CDK11A-222ENST00000498810 NUTM2DQ5VT03 806 aaPredicted RBP15.85■□□□□ 0.13
CDK11A-222ENST00000498810 NWD1Q149M9 1564 aa15.84■□□□□ 0.13
CDK11A-222ENST00000498810 PCDHB8Q9UN66 801 aa15.84■□□□□ 0.13
CDK11A-222ENST00000498810 CHD2O14647 1828 aaKnown RBP15.84■□□□□ 0.13
CDK11A-222ENST00000498810 NKTRP30414 1462 aaKnown RBP15.83■□□□□ 0.12
CDK11A-222ENST00000498810 CIZ1Q9ULV3 898 aaPredicted RBP15.82■□□□□ 0.12
CDK11A-222ENST00000498810 SETD5Q9C0A6 1442 aa15.82■□□□□ 0.12
CDK11A-222ENST00000498810 TMEM106CQ9BVX2 250 aa15.81■□□□□ 0.12
CDK11A-222ENST00000498810 ACIN1Q9UKV3 1341 aaKnown RBP15.81■□□□□ 0.12
CDK11A-222ENST00000498810 TRIM35Q9UPQ4 493 aa15.8■□□□□ 0.12
CDK11A-222ENST00000498810 NEXMIFQ5QGS0 1516 aa15.79■□□□□ 0.12
CDK11A-222ENST00000498810 CCDC144AA2RUR9 1427 aa15.79■□□□□ 0.12
CDK11A-222ENST00000498810 KCNA6P17658 529 aa15.79■□□□□ 0.12
CDK11A-222ENST00000498810 PPLO60437 1756 aa15.79■□□□□ 0.12
CDK11A-222ENST00000498810 ZNF467Q7Z7K2 595 aaPredicted RBP15.78■□□□□ 0.12
CDK11A-222ENST00000498810 PROSER2Q86WR7 435 aaPredicted RBP15.78■□□□□ 0.12
CDK11A-222ENST00000498810 POTEFA5A3E0 1075 aa15.77■□□□□ 0.12
CDK11A-222ENST00000498810 C14orf37Q86TY3 774 aa15.77■□□□□ 0.12
CDK11A-222ENST00000498810 SETBP1Q9Y6X0 1596 aa15.77■□□□□ 0.11
CDK11A-222ENST00000498810 TMEM94Q12767 1356 aa15.76■□□□□ 0.11
CDK11A-222ENST00000498810 RAB3GAP2Q9H2M9 1393 aa15.76■□□□□ 0.11
CDK11A-222ENST00000498810 NRXN3Q9Y4C0 1643 aa15.76■□□□□ 0.11
CDK11A-222ENST00000498810 MSH6P52701 1360 aa15.75■□□□□ 0.11
CDK11A-222ENST00000498810 MPHOSPH9Q99550 1183 aa15.75■□□□□ 0.11
CDK11A-222ENST00000498810 ADAMTS13Q76LX8 1427 aa15.75■□□□□ 0.11
CDK11A-222ENST00000498810 IER5LQ5T953 404 aa15.74■□□□□ 0.11
CDK11A-222ENST00000498810 TBX22Q9Y458 520 aa15.74■□□□□ 0.11
CDK11A-222ENST00000498810 PIK3R4Q99570 1358 aa15.73■□□□□ 0.11
CDK11A-222ENST00000498810 POTEJP0CG39 1038 aa15.72■□□□□ 0.11
CDK11A-222ENST00000498810 RBM33Q96EV2 1170 aaKnown RBP15.72■□□□□ 0.11
CDK11A-222ENST00000498810 OTUD5Q96G74 571 aa15.72■□□□□ 0.11
CDK11A-222ENST00000498810 ALKQ9UM73 1620 aa15.72■□□□□ 0.11
CDK11A-222ENST00000498810 XRN1Q8IZH2 1706 aaKnown RBP15.71■□□□□ 0.11
CDK11A-222ENST00000498810 IFT172Q9UG01 1749 aa15.71■□□□□ 0.11
CDK11A-222ENST00000498810 ROBO1Q9Y6N7 1651 aa15.7■□□□□ 0.1
CDK11A-222ENST00000498810 VGFO15240 615 aaPredicted RBP15.7■□□□□ 0.1
CDK11A-222ENST00000498810 COLQQ9Y215 455 aaPredicted RBP15.7■□□□□ 0.1
CDK11A-222ENST00000498810 DISP3Q9P2K9 1392 aa15.69■□□□□ 0.1
CDK11A-222ENST00000498810 RPGRIP1LQ68CZ1 1315 aa15.68■□□□□ 0.1
CDK11A-222ENST00000498810 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
CDK11A-222ENST00000498810 HSPA1LP34931 641 aa15.68■□□□□ 0.1
CDK11A-222ENST00000498810 RGL3Q3MIN7 710 aa15.68■□□□□ 0.1
CDK11A-222ENST00000498810 SETD1AO15047 1707 aaKnown RBP15.68■□□□□ 0.1
CDK11A-222ENST00000498810 AMOTL2Q9Y2J4 779 aa15.67■□□□□ 0.1
CDK11A-222ENST00000498810 PHLPP1O60346 1717 aa15.65■□□□□ 0.1
CDK11A-222ENST00000498810 ATF3P18847 181 aa15.64■□□□□ 0.09
CDK11A-222ENST00000498810 NALCNQ8IZF0 1738 aa15.64■□□□□ 0.09
CDK11A-222ENST00000498810 PTPRUQ92729 1446 aa15.64■□□□□ 0.09
CDK11A-222ENST00000498810 NCOA3Q9Y6Q9 1424 aa15.64■□□□□ 0.09
CDK11A-222ENST00000498810 METP08581 1390 aa15.63■□□□□ 0.09
CDK11A-222ENST00000498810 SEC24BO95487 1268 aa15.63■□□□□ 0.09
CDK11A-222ENST00000498810 PSEN1P49768 467 aa15.63■□□□□ 0.09
CDK11A-222ENST00000498810 ANKRD30BQ9BXX2 1392 aa15.62■□□□□ 0.09
CDK11A-222ENST00000498810 MED1Q15648 1581 aaPredicted RBP15.62■□□□□ 0.09
CDK11A-222ENST00000498810 SPATA31E1Q6ZUB1 1445 aa15.62■□□□□ 0.09
CDK11A-222ENST00000498810 LAMC1P11047 1609 aa15.62■□□□□ 0.09
CDK11A-222ENST00000498810 CADPS2Q86UW7 1296 aa15.61■□□□□ 0.09
CDK11A-222ENST00000498810 IRX5P78411 483 aaPredicted RBP15.6■□□□□ 0.09
CDK11A-222ENST00000498810 PDAP1Q13442 181 aaKnown RBP15.6■□□□□ 0.09
CDK11A-222ENST00000498810 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
CDK11A-222ENST00000498810 C19orf44Q9H6X5 657 aa15.59■□□□□ 0.09
CDK11A-222ENST00000498810 DCCP43146 1447 aa15.59■□□□□ 0.09
CDK11A-222ENST00000498810 PTCH1Q13635 1447 aa15.59■□□□□ 0.09
CDK11A-222ENST00000498810 KNDC1Q76NI1 1749 aa15.58■□□□□ 0.08
CDK11A-222ENST00000498810 SLAIN2Q9P270 581 aa15.58■□□□□ 0.08
CDK11A-222ENST00000498810 ADGRL3Q9HAR2 1447 aa15.58■□□□□ 0.08
CDK11A-222ENST00000498810 MAMSTRQ6ZN01 415 aa15.57■□□□□ 0.08
CDK11A-222ENST00000498810 ADGRF5Q8IZF2 1346 aa15.57■□□□□ 0.08
CDK11A-222ENST00000498810 MYOM2P54296 1465 aa15.57■□□□□ 0.08
CDK11A-222ENST00000498810 HRCP23327 699 aa15.56■□□□□ 0.08
CDK11A-222ENST00000498810 PIK3C2GO75747 1445 aa15.56■□□□□ 0.08
CDK11A-222ENST00000498810 STK26Q9P289 416 aa15.53■□□□□ 0.08
CDK11A-222ENST00000498810 ROBO2Q9HCK4 1378 aa15.52■□□□□ 0.08
CDK11A-222ENST00000498810 PLCG2P16885 1265 aa15.52■□□□□ 0.08
CDK11A-222ENST00000498810 OCEL1Q9H607 264 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms