RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 ANKLE2Q86XL3 938 aa19.65■□□□□ 0.74
PARP1-209ENST00000498787 SAFB2Q14151 953 aaKnown RBP eCLIP19.64■□□□□ 0.73
PARP1-209ENST00000498787 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
PARP1-209ENST00000498787 CC2D1BQ5T0F9 858 aaKnown RBP19.64■□□□□ 0.73
PARP1-209ENST00000498787 SETD1AO15047 1707 aaKnown RBP19.64■□□□□ 0.73
PARP1-209ENST00000498787 TULP4Q9NRJ4 1543 aa19.63■□□□□ 0.73
PARP1-209ENST00000498787 MED14O60244 1454 aa19.63■□□□□ 0.73
PARP1-209ENST00000498787 ANKRD36BQ8N2N9 1353 aa19.63■□□□□ 0.73
PARP1-209ENST00000498787 PIK3R4Q99570 1358 aa19.63■□□□□ 0.73
PARP1-209ENST00000498787 MINK1Q8N4C8 1332 aaPredicted RBP19.63■□□□□ 0.73
PARP1-209ENST00000498787 SENP3Q9H4L4 574 aaPredicted RBP19.63■□□□□ 0.73
PARP1-209ENST00000498787 TERF2IPQ9NYB0 399 aa19.63■□□□□ 0.73
PARP1-209ENST00000498787 CNGB1Q14028 1251 aaPredicted RBP19.62■□□□□ 0.73
PARP1-209ENST00000498787 SETD1BQ9UPS6 1966 aaKnown RBP19.62■□□□□ 0.73
PARP1-209ENST00000498787 MYOM1P52179 1685 aa19.62■□□□□ 0.73
PARP1-209ENST00000498787 CDK19Q9BWU1 502 aa19.61■□□□□ 0.73
PARP1-209ENST00000498787 CABP2Q9NPB3 220 aa19.61■□□□□ 0.73
PARP1-209ENST00000498787 KNDC1Q76NI1 1749 aa19.61■□□□□ 0.73
PARP1-209ENST00000498787 CPS1P31327 1500 aa19.61■□□□□ 0.73
PARP1-209ENST00000498787 NSD2O96028 1365 aa19.6■□□□□ 0.73
PARP1-209ENST00000498787 CGNL1Q0VF96 1302 aa19.6■□□□□ 0.73
PARP1-209ENST00000498787 FAM9BQ8IZU0 186 aa19.6■□□□□ 0.73
PARP1-209ENST00000498787 HDGFL2Q7Z4V5 671 aaPredicted RBP19.59■□□□□ 0.73
PARP1-209ENST00000498787 SLC12A5Q9H2X9 1139 aa19.59■□□□□ 0.73
PARP1-209ENST00000498787 ZNF142P52746 1687 aaPredicted RBP19.59■□□□□ 0.73
PARP1-209ENST00000498787 CCDC184Q52MB2 194 aa19.58■□□□□ 0.72
PARP1-209ENST00000498787 INSRP06213 1382 aa19.57■□□□□ 0.72
PARP1-209ENST00000498787 WASLO00401 505 aaPredicted RBP19.57■□□□□ 0.72
PARP1-209ENST00000498787 HNRNPUQ00839 825 aaKnown RBP eCLIP19.57■□□□□ 0.72
PARP1-209ENST00000498787 WAPLQ7Z5K2 1190 aa19.57■□□□□ 0.72
PARP1-209ENST00000498787 PNISRQ8TF01 805 aaKnown RBP19.57■□□□□ 0.72
PARP1-209ENST00000498787 CARD14Q9BXL6 1004 aa19.56■□□□□ 0.72
PARP1-209ENST00000498787 SLC26A8Q96RN1 970 aa19.55■□□□□ 0.72
PARP1-209ENST00000498787 NSD3Q9BZ95 1437 aa19.55■□□□□ 0.72
PARP1-209ENST00000498787 AMOTL2Q9Y2J4 779 aa19.55■□□□□ 0.72
PARP1-209ENST00000498787 PTCH1Q13635 1447 aa19.54■□□□□ 0.72
PARP1-209ENST00000498787 PPP2R1AP30153 589 aa19.53■□□□□ 0.72
PARP1-209ENST00000498787 PLEKHH1Q9ULM0 1364 aa19.53■□□□□ 0.72
PARP1-209ENST00000498787 USP32Q8NFA0 1604 aa19.52■□□□□ 0.72
PARP1-209ENST00000498787 MORC1Q86VD1 984 aa19.51■□□□□ 0.71
PARP1-209ENST00000498787 ROBO2Q9HCK4 1378 aa19.51■□□□□ 0.71
PARP1-209ENST00000498787 ATP7BP35670 1465 aa19.5■□□□□ 0.71
PARP1-209ENST00000498787 CCDC61Q9Y6R9 512 aa19.5■□□□□ 0.71
PARP1-209ENST00000498787 ZBED9Q6R2W3 1325 aa19.5■□□□□ 0.71
PARP1-209ENST00000498787 ZNF692Q9BU19 519 aaPredicted RBP19.48■□□□□ 0.71
PARP1-209ENST00000498787 CABP1Q9NZU7 370 aa19.48■□□□□ 0.71
PARP1-209ENST00000498787 ADGRB2O60241 1585 aa19.48■□□□□ 0.71
PARP1-209ENST00000498787 A0A1W2PP64 1363 aa19.47■□□□□ 0.71
PARP1-209ENST00000498787 NUDT16Q96DE0 195 aaKnown RBP19.47■□□□□ 0.71
PARP1-209ENST00000498787 PTPRUQ92729 1446 aa19.47■□□□□ 0.71
PARP1-209ENST00000498787 NPHP4O75161 1426 aaPredicted RBP19.46■□□□□ 0.71
PARP1-209ENST00000498787 WDR43Q15061 677 aaKnown RBP eCLIP19.46■□□□□ 0.71
PARP1-209ENST00000498787 CFAP53Q96M91 514 aa19.44■□□□□ 0.7
PARP1-209ENST00000498787 PPIP5K1Q6PFW1 1433 aa19.43■□□□□ 0.7
PARP1-209ENST00000498787 POLR3AO14802 1390 aaPredicted RBP19.42■□□□□ 0.7
PARP1-209ENST00000498787 XRN1Q8IZH2 1706 aaKnown RBP19.4■□□□□ 0.7
PARP1-209ENST00000498787 PLEKHG3A1L390 1219 aa19.4■□□□□ 0.7
PARP1-209ENST00000498787 CPSF1Q10570 1443 aaKnown RBP19.4■□□□□ 0.7
PARP1-209ENST00000498787 EDC4Q6P2E9 1401 aaKnown RBP19.4■□□□□ 0.7
PARP1-209ENST00000498787 CD163L1Q9NR16 1453 aa19.4■□□□□ 0.7
PARP1-209ENST00000498787 KCNA6P17658 529 aa19.39■□□□□ 0.69
PARP1-209ENST00000498787 GTF3C3Q9Y5Q9 886 aa19.38■□□□□ 0.69
PARP1-209ENST00000498787 ANKARQ7Z5J8 1434 aa19.37■□□□□ 0.69
PARP1-209ENST00000498787 FYB1O15117 783 aa19.37■□□□□ 0.69
PARP1-209ENST00000498787 NGEFQ8N5V2 710 aa19.37■□□□□ 0.69
PARP1-209ENST00000498787 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
PARP1-209ENST00000498787 PDE3BQ13370 1112 aa19.36■□□□□ 0.69
PARP1-209ENST00000498787 CDC42BPGQ6DT37 1551 aa19.36■□□□□ 0.69
PARP1-209ENST00000498787 BLMP54132 1417 aaPredicted RBP19.34■□□□□ 0.69
PARP1-209ENST00000498787 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
PARP1-209ENST00000498787 NCKAP5LQ9HCH0 1330 aa19.33■□□□□ 0.69
PARP1-209ENST00000498787 PRR36Q9H6K5 1346 aa19.32■□□□□ 0.68
PARP1-209ENST00000498787 GGNBP2Q9H3C7 697 aa19.32■□□□□ 0.68
PARP1-209ENST00000498787 ADAMTS8Q9UP79 889 aa19.32■□□□□ 0.68
PARP1-209ENST00000498787 NUDCQ9Y266 331 aa19.32■□□□□ 0.68
PARP1-209ENST00000498787 NEFLP07196 543 aa19.31■□□□□ 0.68
PARP1-209ENST00000498787 MTHFSP49914 203 aa19.31■□□□□ 0.68
PARP1-209ENST00000498787 CHD2O14647 1828 aaKnown RBP19.3■□□□□ 0.68
PARP1-209ENST00000498787 TNNT2P45379 298 aaPredicted RBP19.3■□□□□ 0.68
PARP1-209ENST00000498787 COG3Q96JB2 828 aa19.3■□□□□ 0.68
PARP1-209ENST00000498787 ACEP12821 1306 aa19.29■□□□□ 0.68
PARP1-209ENST00000498787 TTC21AQ8NDW8 1320 aa19.29■□□□□ 0.68
PARP1-209ENST00000498787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.29■□□□□ 0.68
PARP1-209ENST00000498787 NGDNQ8NEJ9 315 aaKnown RBP19.28■□□□□ 0.68
PARP1-209ENST00000498787 ADGRL3Q9HAR2 1447 aa19.27■□□□□ 0.68
PARP1-209ENST00000498787 PNNQ9H307 717 aaKnown RBP19.27■□□□□ 0.68
PARP1-209ENST00000498787 ANKRD26Q9UPS8 1709 aa19.27■□□□□ 0.68
PARP1-209ENST00000498787 NKTRP30414 1462 aaKnown RBP19.27■□□□□ 0.67
PARP1-209ENST00000498787 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
PARP1-209ENST00000498787 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
PARP1-209ENST00000498787 KDM4FA0A1W2PPD8 638 aa19.26■□□□□ 0.67
PARP1-209ENST00000498787 AATKQ6ZMQ8 1374 aa19.26■□□□□ 0.67
PARP1-209ENST00000498787 NWD1Q149M9 1564 aa19.26■□□□□ 0.67
PARP1-209ENST00000498787 TTC21BQ7Z4L5 1316 aa19.25■□□□□ 0.67
PARP1-209ENST00000498787 ITSN1Q15811 1721 aa19.25■□□□□ 0.67
PARP1-209ENST00000498787 TOPAZ1Q8N9V7 1692 aa19.25■□□□□ 0.67
PARP1-209ENST00000498787 C14orf37Q86TY3 774 aa19.25■□□□□ 0.67
PARP1-209ENST00000498787 USP6P35125 1406 aa19.25■□□□□ 0.67
PARP1-209ENST00000498787 KIF20BQ96Q89 1820 aa19.24■□□□□ 0.67
PARP1-209ENST00000498787 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms