RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 CABP2Q9NPB3 220 aa22.27■■□□□ 1.16
HLA-A-208ENST00000496081 MED14O60244 1454 aa22.27■■□□□ 1.15
HLA-A-208ENST00000496081 WAPLQ7Z5K2 1190 aa22.26■■□□□ 1.15
HLA-A-208ENST00000496081 FAM9BQ8IZU0 186 aa22.26■■□□□ 1.15
HLA-A-208ENST00000496081 CARD14Q9BXL6 1004 aa22.26■■□□□ 1.15
HLA-A-208ENST00000496081 SLC12A5Q9H2X9 1139 aa22.26■■□□□ 1.15
HLA-A-208ENST00000496081 SETD1BQ9UPS6 1966 aaKnown RBP22.26■■□□□ 1.15
HLA-A-208ENST00000496081 BRD4O60885 1362 aaPredicted RBP22.25■■□□□ 1.15
HLA-A-208ENST00000496081 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
HLA-A-208ENST00000496081 TMC1Q8TDI8 760 aa22.25■■□□□ 1.15
HLA-A-208ENST00000496081 TECPR2O15040 1411 aa22.25■■□□□ 1.15
HLA-A-208ENST00000496081 NPC1L1Q9UHC9 1359 aa22.25■■□□□ 1.15
HLA-A-208ENST00000496081 ZNF142P52746 1687 aaPredicted RBP22.24■■□□□ 1.15
HLA-A-208ENST00000496081 AEBP2Q6ZN18 517 aaPredicted RBP22.23■■□□□ 1.15
HLA-A-208ENST00000496081 SIRT1Q96EB6 747 aa22.23■■□□□ 1.15
HLA-A-208ENST00000496081 CPS1P31327 1500 aa22.23■■□□□ 1.15
HLA-A-208ENST00000496081 SRPK2P78362 688 aaKnown RBP22.22■■□□□ 1.15
HLA-A-208ENST00000496081 FAM135BQ49AJ0 1406 aa22.22■■□□□ 1.15
HLA-A-208ENST00000496081 NLRP13Q86W25 1043 aa22.22■■□□□ 1.15
HLA-A-208ENST00000496081 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
HLA-A-208ENST00000496081 PNISRQ8TF01 805 aaKnown RBP22.2■■□□□ 1.14
HLA-A-208ENST00000496081 CDK19Q9BWU1 502 aa22.2■■□□□ 1.14
HLA-A-208ENST00000496081 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
HLA-A-208ENST00000496081 TBX22Q9Y458 520 aa22.19■■□□□ 1.14
HLA-A-208ENST00000496081 ATAD2Q6PL18 1390 aa22.19■■□□□ 1.14
HLA-A-208ENST00000496081 NINLQ9Y2I6 1382 aa22.18■■□□□ 1.14
HLA-A-208ENST00000496081 ANKRD36BQ8N2N9 1353 aa22.17■■□□□ 1.14
HLA-A-208ENST00000496081 NSD3Q9BZ95 1437 aa22.17■■□□□ 1.14
HLA-A-208ENST00000496081 ROBO2Q9HCK4 1378 aa22.17■■□□□ 1.14
HLA-A-208ENST00000496081 PTPRUQ92729 1446 aa22.17■■□□□ 1.14
HLA-A-208ENST00000496081 DIP2AQ14689 1571 aa22.17■■□□□ 1.14
HLA-A-208ENST00000496081 PPP2R1AP30153 589 aa22.14■■□□□ 1.13
HLA-A-208ENST00000496081 USP32Q8NFA0 1604 aa22.13■■□□□ 1.13
HLA-A-208ENST00000496081 HSPA2P54652 639 aa22.13■■□□□ 1.13
HLA-A-208ENST00000496081 ANKLE2Q86XL3 938 aa22.12■■□□□ 1.13
HLA-A-208ENST00000496081 WASLO00401 505 aaPredicted RBP22.12■■□□□ 1.13
HLA-A-208ENST00000496081 AMOTL2Q9Y2J4 779 aa22.12■■□□□ 1.13
HLA-A-208ENST00000496081 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
HLA-A-208ENST00000496081 LMTK3Q96Q04 1460 aa22.11■■□□□ 1.13
HLA-A-208ENST00000496081 A0A1W2PP64 1363 aa22.11■■□□□ 1.13
HLA-A-208ENST00000496081 CD163L1Q9NR16 1453 aa22.1■■□□□ 1.13
HLA-A-208ENST00000496081 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.09■■□□□ 1.13
HLA-A-208ENST00000496081 CGNL1Q0VF96 1302 aa22.08■■□□□ 1.13
HLA-A-208ENST00000496081 TERF2IPQ9NYB0 399 aa22.08■■□□□ 1.13
HLA-A-208ENST00000496081 CABP1Q9NZU7 370 aa22.08■■□□□ 1.13
HLA-A-208ENST00000496081 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
HLA-A-208ENST00000496081 PTCH1Q13635 1447 aa22.07■■□□□ 1.12
HLA-A-208ENST00000496081 ADGRB2O60241 1585 aa22.07■■□□□ 1.12
HLA-A-208ENST00000496081 XRN1Q8IZH2 1706 aaKnown RBP22.07■■□□□ 1.12
HLA-A-208ENST00000496081 PIK3R4Q99570 1358 aa22.06■■□□□ 1.12
HLA-A-208ENST00000496081 HDGFL2Q7Z4V5 671 aaPredicted RBP22.04■■□□□ 1.12
HLA-A-208ENST00000496081 ZBED9Q6R2W3 1325 aa22.04■■□□□ 1.12
HLA-A-208ENST00000496081 MORC1Q86VD1 984 aa22.03■■□□□ 1.12
HLA-A-208ENST00000496081 ATP7BP35670 1465 aa22.03■■□□□ 1.12
HLA-A-208ENST00000496081 NSD2O96028 1365 aa22.03■■□□□ 1.12
HLA-A-208ENST00000496081 NUDT16Q96DE0 195 aaKnown RBP22.02■■□□□ 1.12
HLA-A-208ENST00000496081 PPIP5K1Q6PFW1 1433 aa22.01■■□□□ 1.11
HLA-A-208ENST00000496081 NCKAP5LQ9HCH0 1330 aa22■■□□□ 1.11
HLA-A-208ENST00000496081 CHD2O14647 1828 aaKnown RBP22■■□□□ 1.11
HLA-A-208ENST00000496081 KCNA6P17658 529 aa21.99■■□□□ 1.11
HLA-A-208ENST00000496081 CCDC61Q9Y6R9 512 aa21.99■■□□□ 1.11
HLA-A-208ENST00000496081 PRR36Q9H6K5 1346 aa21.99■■□□□ 1.11
HLA-A-208ENST00000496081 NPHP4O75161 1426 aaPredicted RBP21.99■■□□□ 1.11
HLA-A-208ENST00000496081 CPSF1Q10570 1443 aaKnown RBP21.98■■□□□ 1.11
HLA-A-208ENST00000496081 INSRP06213 1382 aa21.97■■□□□ 1.11
HLA-A-208ENST00000496081 FYB1O15117 783 aa21.97■■□□□ 1.11
HLA-A-208ENST00000496081 TNNT2P45379 298 aaPredicted RBP21.96■■□□□ 1.11
HLA-A-208ENST00000496081 CDC42BPGQ6DT37 1551 aa21.96■■□□□ 1.11
HLA-A-208ENST00000496081 ANKRD26Q9UPS8 1709 aa21.95■■□□□ 1.1
HLA-A-208ENST00000496081 GGNBP2Q9H3C7 697 aa21.94■■□□□ 1.1
HLA-A-208ENST00000496081 TOPAZ1Q8N9V7 1692 aa21.94■■□□□ 1.1
HLA-A-208ENST00000496081 BLMP54132 1417 aaPredicted RBP21.94■■□□□ 1.1
HLA-A-208ENST00000496081 KIF20BQ96Q89 1820 aa21.94■■□□□ 1.1
HLA-A-208ENST00000496081 ADAMTS8Q9UP79 889 aa21.93■■□□□ 1.1
HLA-A-208ENST00000496081 POLR3AO14802 1390 aaPredicted RBP21.93■■□□□ 1.1
HLA-A-208ENST00000496081 AKAP12Q02952 1782 aa21.92■■□□□ 1.1
HLA-A-208ENST00000496081 MON2Q7Z3U7 1717 aa21.92■■□□□ 1.1
HLA-A-208ENST00000496081 SENP3-EIF4A1A0A087X0R7 540 aa21.92■■□□□ 1.1
HLA-A-208ENST00000496081 WDR43Q15061 677 aaKnown RBP eCLIP21.92■■□□□ 1.1
HLA-A-208ENST00000496081 STRCQ7RTU9 1775 aa21.91■■□□□ 1.1
HLA-A-208ENST00000496081 EDC4Q6P2E9 1401 aaKnown RBP21.91■■□□□ 1.1
HLA-A-208ENST00000496081 NUTM2FA1L443 756 aa21.91■■□□□ 1.1
HLA-A-208ENST00000496081 ITSN1Q15811 1721 aa21.91■■□□□ 1.1
HLA-A-208ENST00000496081 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.89■■□□□ 1.1
HLA-A-208ENST00000496081 PLEKHG3A1L390 1219 aa21.89■■□□□ 1.09
HLA-A-208ENST00000496081 MTHFSP49914 203 aa21.89■■□□□ 1.09
HLA-A-208ENST00000496081 ZNF692Q9BU19 519 aaPredicted RBP21.89■■□□□ 1.09
HLA-A-208ENST00000496081 NKTRP30414 1462 aaKnown RBP21.87■■□□□ 1.09
HLA-A-208ENST00000496081 RGPD8O14715 1765 aaPredicted RBP21.85■■□□□ 1.09
HLA-A-208ENST00000496081 ACEP12821 1306 aa21.85■■□□□ 1.09
HLA-A-208ENST00000496081 NALCNQ8IZF0 1738 aa21.85■■□□□ 1.09
HLA-A-208ENST00000496081 SHPRHQ149N8 1683 aa21.84■■□□□ 1.09
HLA-A-208ENST00000496081 FMN2Q9NZ56 1722 aa21.84■■□□□ 1.09
HLA-A-208ENST00000496081 NWD1Q149M9 1564 aa21.83■■□□□ 1.09
HLA-A-208ENST00000496081 ANKARQ7Z5J8 1434 aa21.83■■□□□ 1.08
HLA-A-208ENST00000496081 NME9Q86XW9 330 aa21.82■■□□□ 1.08
HLA-A-208ENST00000496081 CFAP53Q96M91 514 aa21.82■■□□□ 1.08
HLA-A-208ENST00000496081 NRKQ7Z2Y5 1582 aa21.82■■□□□ 1.08
HLA-A-208ENST00000496081 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
HLA-A-208ENST00000496081 SALL2Q9Y467 1007 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms