RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 DYNC1I1O14576 645 aa12.68□□□□□ -0.38
LINC00488-201ENST00000494582 TSC1Q92574 1164 aa12.68□□□□□ -0.38
LINC00488-201ENST00000494582 RRP7AQ9Y3A4 280 aaKnown RBP12.68□□□□□ -0.38
LINC00488-201ENST00000494582 UTP14CQ5TAP6 766 aaKnown RBP12.67□□□□□ -0.38
LINC00488-201ENST00000494582 RBM42Q9BTD8 480 aaKnown RBP12.67□□□□□ -0.38
LINC00488-201ENST00000494582 DDX49Q9Y6V7 483 aaKnown RBP12.67□□□□□ -0.38
LINC00488-201ENST00000494582 ASXL1Q8IXJ9 1541 aa12.67□□□□□ -0.38
LINC00488-201ENST00000494582 C9orf84Q5VXU9 1444 aa12.67□□□□□ -0.38
LINC00488-201ENST00000494582 SCAPERQ9BY12 1400 aa12.67□□□□□ -0.38
LINC00488-201ENST00000494582 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
LINC00488-201ENST00000494582 KLHL40Q2TBA0 621 aa12.67□□□□□ -0.38
LINC00488-201ENST00000494582 IBTKQ9P2D0 1353 aaPredicted RBP12.67□□□□□ -0.38
LINC00488-201ENST00000494582 GTF2E1P29083 439 aaPredicted RBP12.66□□□□□ -0.38
LINC00488-201ENST00000494582 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
LINC00488-201ENST00000494582 CCDC94Q9BW85 323 aaPredicted RBP12.66□□□□□ -0.38
LINC00488-201ENST00000494582 AK9Q5TCS8 1911 aa12.66□□□□□ -0.38
LINC00488-201ENST00000494582 CDC42BPAQ5VT25 1732 aa12.66□□□□□ -0.38
LINC00488-201ENST00000494582 TROQ12816 1431 aaPredicted RBP12.66□□□□□ -0.38
LINC00488-201ENST00000494582 BAG4O95429 457 aaKnown RBP12.66□□□□□ -0.38
LINC00488-201ENST00000494582 PDE4CQ08493 712 aa12.66□□□□□ -0.38
LINC00488-201ENST00000494582 HS1BP3Q53T59 392 aa12.66□□□□□ -0.38
LINC00488-201ENST00000494582 ANP32BQ92688 251 aaKnown RBP12.66□□□□□ -0.38
LINC00488-201ENST00000494582 ZNF445P59923 1031 aa12.65□□□□□ -0.38
LINC00488-201ENST00000494582 ZKSCAN5Q9Y2L8 839 aa12.65□□□□□ -0.38
LINC00488-201ENST00000494582 SHROOM2Q13796 1616 aa12.65□□□□□ -0.38
LINC00488-201ENST00000494582 ZSCAN23Q3MJ62 389 aa12.65□□□□□ -0.38
LINC00488-201ENST00000494582 MYO5CQ9NQX4 1742 aa12.64□□□□□ -0.39
LINC00488-201ENST00000494582 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
LINC00488-201ENST00000494582 MVPQ14764 893 aaKnown RBP12.64□□□□□ -0.39
LINC00488-201ENST00000494582 CAVIN1Q6NZI2 390 aaKnown RBP12.64□□□□□ -0.39
LINC00488-201ENST00000494582 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
LINC00488-201ENST00000494582 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
LINC00488-201ENST00000494582 ZBTB7CA1YPR0 619 aa12.64□□□□□ -0.39
LINC00488-201ENST00000494582 SASS6Q6UVJ0 657 aa12.64□□□□□ -0.39
LINC00488-201ENST00000494582 MTERF4Q7Z6M4 381 aaKnown RBP12.63□□□□□ -0.39
LINC00488-201ENST00000494582 RAPGEF6Q8TEU7 1601 aa12.63□□□□□ -0.39
LINC00488-201ENST00000494582 CLEC17AQ6ZS10 378 aa12.63□□□□□ -0.39
LINC00488-201ENST00000494582 MYOM1P52179 1685 aa12.63□□□□□ -0.39
LINC00488-201ENST00000494582 STAC3Q96MF2 364 aa12.62□□□□□ -0.39
LINC00488-201ENST00000494582 RBM27Q9P2N5 1060 aaKnown RBP12.62□□□□□ -0.39
LINC00488-201ENST00000494582 DISP1Q96F81 1524 aa12.62□□□□□ -0.39
LINC00488-201ENST00000494582 SYNMO15061 1565 aa12.62□□□□□ -0.39
LINC00488-201ENST00000494582 PPP4R3BQ5MIZ7 849 aa12.62□□□□□ -0.39
LINC00488-201ENST00000494582 K7ELQ4 463 aaPredicted RBP12.61□□□□□ -0.39
LINC00488-201ENST00000494582 NCLP19338 710 aaKnown RBP12.61□□□□□ -0.39
LINC00488-201ENST00000494582 PTMSP20962 102 aa12.61□□□□□ -0.39
LINC00488-201ENST00000494582 CBX1P83916 185 aa12.61□□□□□ -0.39
LINC00488-201ENST00000494582 ATP2B3Q16720 1220 aa12.61□□□□□ -0.39
LINC00488-201ENST00000494582 RNF17Q9BXT8 1623 aaKnown RBP12.61□□□□□ -0.39
LINC00488-201ENST00000494582 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
LINC00488-201ENST00000494582 CCDC141Q6ZP82 1450 aa12.61□□□□□ -0.39
LINC00488-201ENST00000494582 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
LINC00488-201ENST00000494582 PKP1Q13835 747 aa12.61□□□□□ -0.39
LINC00488-201ENST00000494582 MCTP1Q6DN14 999 aa12.61□□□□□ -0.39
LINC00488-201ENST00000494582 LMBRD1Q9NUN5 540 aa12.61□□□□□ -0.39
LINC00488-201ENST00000494582 FAM177BA6PVY3 158 aa12.6□□□□□ -0.39
LINC00488-201ENST00000494582 CHAMP1Q96JM3 812 aa12.6□□□□□ -0.39
LINC00488-201ENST00000494582 SHANK2Q9UPX8 1470 aa12.6□□□□□ -0.39
LINC00488-201ENST00000494582 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
LINC00488-201ENST00000494582 HDAC1Q13547 482 aaPredicted RBP12.59□□□□□ -0.39
LINC00488-201ENST00000494582 CSPP1Q1MSJ5 1256 aa12.59□□□□□ -0.39
LINC00488-201ENST00000494582 BCL11BQ9C0K0 894 aaPredicted RBP12.59□□□□□ -0.39
LINC00488-201ENST00000494582 PDS5BQ9NTI5 1447 aa12.59□□□□□ -0.39
LINC00488-201ENST00000494582 KIAA0556O60303 1618 aa12.59□□□□□ -0.39
LINC00488-201ENST00000494582 NPC1L1Q9UHC9 1359 aa12.59□□□□□ -0.39
LINC00488-201ENST00000494582 GPT2Q8TD30 523 aa12.59□□□□□ -0.39
LINC00488-201ENST00000494582 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
LINC00488-201ENST00000494582 PBRM1Q86U86 1689 aa12.59□□□□□ -0.39
LINC00488-201ENST00000494582 EIF2AK4Q9P2K8 1649 aaKnown RBP12.59□□□□□ -0.39
LINC00488-201ENST00000494582 HNRNPMP52272 730 aaKnown RBP eCLIP12.58□□□□□ -0.4
LINC00488-201ENST00000494582 CARD14Q9BXL6 1004 aa12.58□□□□□ -0.4
LINC00488-201ENST00000494582 SYNJ2O15056 1496 aa12.58□□□□□ -0.4
LINC00488-201ENST00000494582 GOLGA6L22H0YM25 854 aa12.58□□□□□ -0.4
LINC00488-201ENST00000494582 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.4
LINC00488-201ENST00000494582 TCP11L2Q8N4U5 519 aa12.58□□□□□ -0.4
LINC00488-201ENST00000494582 LNPKQ9C0E8 428 aa12.58□□□□□ -0.4
LINC00488-201ENST00000494582 NSFL1CQ9UNZ2 370 aaKnown RBP12.58□□□□□ -0.4
LINC00488-201ENST00000494582 NGEFQ8N5V2 710 aa12.57□□□□□ -0.4
LINC00488-201ENST00000494582 MYRIPQ8NFW9 859 aa12.57□□□□□ -0.4
LINC00488-201ENST00000494582 IQSEC2Q5JU85 1478 aa12.57□□□□□ -0.4
LINC00488-201ENST00000494582 IQGAP1P46940 1657 aa12.56□□□□□ -0.4
LINC00488-201ENST00000494582 SHPRHQ149N8 1683 aa12.56□□□□□ -0.4
LINC00488-201ENST00000494582 NUP160Q12769 1436 aa12.56□□□□□ -0.4
LINC00488-201ENST00000494582 TRIM27P14373 513 aa12.56□□□□□ -0.4
LINC00488-201ENST00000494582 ZKSCAN2Q63HK3 967 aa12.56□□□□□ -0.4
LINC00488-201ENST00000494582 FTSJ3Q8IY81 847 aaKnown RBP12.56□□□□□ -0.4
LINC00488-201ENST00000494582 MPNDQ8N594 471 aa12.56□□□□□ -0.4
LINC00488-201ENST00000494582 TMEM51Q9NW97 253 aa12.56□□□□□ -0.4
LINC00488-201ENST00000494582 CYP2E1P05181 493 aaPredicted RBP12.56□□□□□ -0.4
LINC00488-201ENST00000494582 MCM5P33992 734 aa12.56□□□□□ -0.4
LINC00488-201ENST00000494582 TMEM63CQ9P1W3 806 aa12.56□□□□□ -0.4
LINC00488-201ENST00000494582 PLB1Q6P1J6 1458 aa12.55□□□□□ -0.4
LINC00488-201ENST00000494582 IGSF3O75054 1194 aa12.55□□□□□ -0.4
LINC00488-201ENST00000494582 TSPY4P0CV99 314 aa12.55□□□□□ -0.4
LINC00488-201ENST00000494582 TSPY10P0CW01 314 aa12.55□□□□□ -0.4
LINC00488-201ENST00000494582 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00488-201ENST00000494582 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.55□□□□□ -0.4
LINC00488-201ENST00000494582 ADAMTS12P58397 1594 aa12.55□□□□□ -0.4
LINC00488-201ENST00000494582 NUCB1Q02818 461 aa12.55□□□□□ -0.4
LINC00488-201ENST00000494582 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms