RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 C11orf96Q7Z7L8 435 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 MSL3Q8N5Y2 521 aaKnown RBP5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 MKL1Q969V6 931 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 SCYL1Q96KG9 808 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 SPACA7Q96KW9 195 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 ARHGEF10LQ9HCE6 1279 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 FBXO9Q9UK97 447 aaPredicted RBP5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 GNEQ9Y223 722 aaKnown RBP5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 SOX12O15370 315 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 DHX16O60231 1041 aaKnown RBP5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 STK10O94804 968 aaKnown RBP5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 PDAP1Q13442 181 aaKnown RBP5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 CCDC146Q8IYE0 955 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 GIPC2Q8TF65 315 aa5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 TMX4Q9H1E5 349 aaPredicted RBP5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 BSDC1Q9NW68 430 aaPredicted RBP5.78□□□□□ -1.48
SUPT20H-221ENST00000493537 BIRC2Q13490 618 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 GET4Q7L5D6 327 aaPredicted RBP5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 TBC1D2Q9BYX2 928 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 RPGRIP1LQ68CZ1 1315 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 GOLGA6CA6NDK9 693 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 GOLGA6BA6NDN3 693 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 GOLGA6DP0CG33 693 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 VAMP1P23763 118 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 PPP4CP60510 307 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 NBPF9Q3BBW0 867 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 SDE2Q6IQ49 451 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 LNPKQ9C0E8 428 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 GOLGA6AQ9NYA3 693 aa5.77□□□□□ -1.49
SUPT20H-221ENST00000493537 HOXA2O43364 376 aa5.76□□□□□ -1.49
SUPT20H-221ENST00000493537 CREBRFQ8IUR6 639 aa5.76□□□□□ -1.49
SUPT20H-221ENST00000493537 PARP9Q8IXQ6 854 aa5.76□□□□□ -1.49
SUPT20H-221ENST00000493537 TPX2Q9ULW0 747 aaKnown RBP5.76□□□□□ -1.49
SUPT20H-221ENST00000493537 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.75□□□□□ -1.49
SUPT20H-221ENST00000493537 CUEDC1Q9NWM3 386 aaPredicted RBP5.75□□□□□ -1.49
SUPT20H-221ENST00000493537 ZBTB47Q9UFB7 747 aaPredicted RBP5.75□□□□□ -1.49
SUPT20H-221ENST00000493537 ABCB7O75027 752 aa5.75□□□□□ -1.49
SUPT20H-221ENST00000493537 DDX46Q7L014 1031 aaKnown RBP5.75□□□□□ -1.49
SUPT20H-221ENST00000493537 ZCRB1Q8TBF4 217 aaKnown RBP5.75□□□□□ -1.49
SUPT20H-221ENST00000493537 SNRNP27Q8WVK2 155 aaKnown RBP5.75□□□□□ -1.49
SUPT20H-221ENST00000493537 RPS6KC1Q96S38 1066 aa5.75□□□□□ -1.49
SUPT20H-221ENST00000493537 BRINP2Q9C0B6 783 aa5.75□□□□□ -1.49
SUPT20H-221ENST00000493537 CEP126Q9P2H0 1117 aa5.75□□□□□ -1.49
SUPT20H-221ENST00000493537 SPDYE2BA6NHP3 402 aa5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 SPDYE5A6NIY4 337 aa5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 SPDYE6P0CI01 402 aa5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 XPCQ01831 940 aaPredicted RBP5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 POU5F1Q01860 360 aaKnown RBP5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 SPDYE2Q495Y8 402 aa5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 CCDC189A1A4V9 331 aa5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 CFAP69A5D8W1 941 aa5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 IRX3P78415 501 aaPredicted RBP5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 CC2D1BQ5T0F9 858 aaKnown RBP5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 ICE2Q659A1 982 aa5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 GLMNQ92990 594 aa5.74□□□□□ -1.49
SUPT20H-221ENST00000493537 RRP9O43818 475 aaKnown RBP5.73□□□□□ -1.49
SUPT20H-221ENST00000493537 RFX1P22670 979 aa5.73□□□□□ -1.49
SUPT20H-221ENST00000493537 AMHR2Q16671 573 aa5.73□□□□□ -1.49
SUPT20H-221ENST00000493537 NPAS4Q8IUM7 802 aa5.73□□□□□ -1.49
SUPT20H-221ENST00000493537 EGFL6Q8IUX8 553 aa5.73□□□□□ -1.49
SUPT20H-221ENST00000493537 TRIM34Q9BYJ4 488 aa5.73□□□□□ -1.49
SUPT20H-221ENST00000493537 NRBP1Q9UHY1 535 aa5.73□□□□□ -1.49
SUPT20H-221ENST00000493537 SCP2P22307 547 aa5.72□□□□□ -1.49
SUPT20H-221ENST00000493537 ERCC5P28715 1186 aaPredicted RBP5.72□□□□□ -1.49
SUPT20H-221ENST00000493537 LMOD3Q0VAK6 560 aa5.72□□□□□ -1.49
SUPT20H-221ENST00000493537 GSE1Q14687 1217 aa5.72□□□□□ -1.49
SUPT20H-221ENST00000493537 PUS10Q3MIT2 529 aaKnown RBP5.72□□□□□ -1.49
SUPT20H-221ENST00000493537 TANGO6Q9C0B7 1094 aa5.72□□□□□ -1.49
SUPT20H-221ENST00000493537 TBX4P57082 545 aa5.72□□□□□ -1.49
SUPT20H-221ENST00000493537 PCGF5Q86SE9 256 aa5.72□□□□□ -1.49
SUPT20H-221ENST00000493537 ERBB3P21860 1342 aa5.72□□□□□ -1.49
SUPT20H-221ENST00000493537 MARSP56192 900 aaKnown RBP5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 CCDC144BQ3MJ40 725 aa5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 TBX22Q9Y458 520 aa5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 SEMA3FQ13275 785 aa5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 HSP90AA2PQ14568 343 aaPredicted RBP5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 HSP90AB3PQ58FF7 597 aa5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 NAP1L4Q99733 375 aaKnown RBP5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 PAGR1Q9BTK6 254 aa5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 CARD10Q9BWT7 1032 aa5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 IRF2BPLQ9H1B7 796 aa5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 QTRT2Q9H974 415 aaKnown RBP5.71□□□□□ -1.5
SUPT20H-221ENST00000493537 TCERG1O14776 1098 aaKnown RBP5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 RECKO95980 971 aa5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 VDRP11473 427 aa5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 SRPK2P78362 688 aaKnown RBP5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 RNF187Q5TA31 235 aaPredicted RBP5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 B4GALNT3Q6L9W6 998 aa5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 PDILTQ8N807 584 aa5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 C1orf131Q8NDD1 294 aaKnown RBP5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 SGIP1Q9BQI5 828 aa5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 RSPH9Q9H1X1 276 aaPredicted RBP5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 SPC25Q9HBM1 224 aa5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 MAP3K20Q9NYL2 800 aaKnown RBP5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 SCINQ9Y6U3 715 aa5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 MINK1Q8N4C8 1332 aaPredicted RBP5.7□□□□□ -1.5
SUPT20H-221ENST00000493537 PLEKHG6Q3KR16 790 aa5.69□□□□□ -1.5
SUPT20H-221ENST00000493537 NOM1Q5C9Z4 860 aaKnown RBP5.69□□□□□ -1.5
SUPT20H-221ENST00000493537 SH3D19Q5HYK7 790 aa5.69□□□□□ -1.5
SUPT20H-221ENST00000493537 INO80BQ9C086 356 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms