RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-218ENST00000493339 ABCC10Q5T3U5 1492 aa16.52■□□□□ 0.24
PTK7-218ENST00000493339 DDIT3P35638 169 aa16.52■□□□□ 0.24
PTK7-218ENST00000493339 AAMPQ13685 434 aa16.52■□□□□ 0.24
PTK7-218ENST00000493339 SKOR2Q2VWA4 1001 aaPredicted RBP16.52■□□□□ 0.24
PTK7-218ENST00000493339 PBRM1Q86U86 1689 aa16.52■□□□□ 0.24
PTK7-218ENST00000493339 MVPQ14764 893 aaKnown RBP16.52■□□□□ 0.23
PTK7-218ENST00000493339 CDC42BPAQ5VT25 1732 aa16.52■□□□□ 0.23
PTK7-218ENST00000493339 RAB3GAP1Q15042 981 aa16.51■□□□□ 0.23
PTK7-218ENST00000493339 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.51■□□□□ 0.23
PTK7-218ENST00000493339 PRDM4Q9UKN5 801 aa16.51■□□□□ 0.23
PTK7-218ENST00000493339 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
PTK7-218ENST00000493339 NGEFQ8N5V2 710 aa16.5■□□□□ 0.23
PTK7-218ENST00000493339 DDX49Q9Y6V7 483 aaKnown RBP16.5■□□□□ 0.23
PTK7-218ENST00000493339 LAMC1P11047 1609 aa16.49■□□□□ 0.23
PTK7-218ENST00000493339 CCDC141Q6ZP82 1450 aa16.49■□□□□ 0.23
PTK7-218ENST00000493339 A0A0U1RQG5 324 aaPredicted RBP16.49■□□□□ 0.23
PTK7-218ENST00000493339 SMC5Q8IY18 1101 aa16.49■□□□□ 0.23
PTK7-218ENST00000493339 PPP1R9BQ96SB3 815 aa16.49■□□□□ 0.23
PTK7-218ENST00000493339 NCLP19338 710 aaKnown RBP16.48■□□□□ 0.23
PTK7-218ENST00000493339 SSFA2P28290 1259 aa16.48■□□□□ 0.23
PTK7-218ENST00000493339 DZIP1LQ8IYY4 767 aaKnown RBP16.48■□□□□ 0.23
PTK7-218ENST00000493339 NCOA3Q9Y6Q9 1424 aa16.48■□□□□ 0.23
PTK7-218ENST00000493339 CD2BP2O95400 341 aaKnown RBP16.47■□□□□ 0.23
PTK7-218ENST00000493339 XPCQ01831 940 aaPredicted RBP16.47■□□□□ 0.23
PTK7-218ENST00000493339 ITPRIPQ8IWB1 547 aa16.47■□□□□ 0.23
PTK7-218ENST00000493339 EIF2AK4Q9P2K8 1649 aaKnown RBP16.47■□□□□ 0.23
PTK7-218ENST00000493339 ZKSCAN2Q63HK3 967 aa16.47■□□□□ 0.23
PTK7-218ENST00000493339 CIZ1Q9ULV3 898 aaPredicted RBP16.47■□□□□ 0.23
PTK7-218ENST00000493339 NUP160Q12769 1436 aa16.47■□□□□ 0.23
PTK7-218ENST00000493339 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
PTK7-218ENST00000493339 GOLGA6L22H0YM25 854 aa16.46■□□□□ 0.23
PTK7-218ENST00000493339 SNX21Q969T3 373 aa16.46■□□□□ 0.23
PTK7-218ENST00000493339 UQCRHLA0A096LP55 91 aa16.45■□□□□ 0.22
PTK7-218ENST00000493339 UQCRHP07919 91 aa16.45■□□□□ 0.22
PTK7-218ENST00000493339 RBM25P49756 843 aaKnown RBP16.45■□□□□ 0.22
PTK7-218ENST00000493339 RBM42Q9BTD8 480 aaKnown RBP16.45■□□□□ 0.22
PTK7-218ENST00000493339 LNPKQ9C0E8 428 aa16.45■□□□□ 0.22
PTK7-218ENST00000493339 PLXNC1O60486 1568 aa16.45■□□□□ 0.22
PTK7-218ENST00000493339 RUNDC1Q96C34 613 aa16.45■□□□□ 0.22
PTK7-218ENST00000493339 SYNMO15061 1565 aa16.44■□□□□ 0.22
PTK7-218ENST00000493339 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
PTK7-218ENST00000493339 PRDM10Q9NQV6 1147 aa16.44■□□□□ 0.22
PTK7-218ENST00000493339 SMC4Q9NTJ3 1288 aa16.44■□□□□ 0.22
PTK7-218ENST00000493339 PTMSP20962 102 aa16.43■□□□□ 0.22
PTK7-218ENST00000493339 TSR2Q969E8 191 aaKnown RBP16.43■□□□□ 0.22
PTK7-218ENST00000493339 MYO5CQ9NQX4 1742 aa16.43■□□□□ 0.22
PTK7-218ENST00000493339 FBLN2P98095 1184 aa16.43■□□□□ 0.22
PTK7-218ENST00000493339 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
PTK7-218ENST00000493339 CAVIN1Q6NZI2 390 aaKnown RBP16.42■□□□□ 0.22
PTK7-218ENST00000493339 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
PTK7-218ENST00000493339 ZBTB7CA1YPR0 619 aa16.41■□□□□ 0.22
PTK7-218ENST00000493339 ADRA2BP18089 450 aa16.41■□□□□ 0.22
PTK7-218ENST00000493339 TRIM27P14373 513 aa16.41■□□□□ 0.22
PTK7-218ENST00000493339 KLHL40Q2TBA0 621 aa16.41■□□□□ 0.22
PTK7-218ENST00000493339 MORC1Q86VD1 984 aa16.41■□□□□ 0.22
PTK7-218ENST00000493339 WDR63Q8IWG1 891 aa16.41■□□□□ 0.22
PTK7-218ENST00000493339 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
PTK7-218ENST00000493339 MAP7D2Q96T17 732 aa16.41■□□□□ 0.22
PTK7-218ENST00000493339 K7ELQ4 463 aaPredicted RBP16.41■□□□□ 0.22
PTK7-218ENST00000493339 BAG4O95429 457 aaKnown RBP16.4■□□□□ 0.22
PTK7-218ENST00000493339 HDAC1Q13547 482 aaPredicted RBP16.4■□□□□ 0.22
PTK7-218ENST00000493339 MCTP1Q6DN14 999 aa16.4■□□□□ 0.22
PTK7-218ENST00000493339 KIF2CQ99661 725 aa16.4■□□□□ 0.22
PTK7-218ENST00000493339 ZHX1Q9UKY1 873 aaPredicted RBP16.4■□□□□ 0.22
PTK7-218ENST00000493339 SCAF11Q99590 1463 aaKnown RBP16.4■□□□□ 0.22
PTK7-218ENST00000493339 TERF1P54274 439 aa16.39■□□□□ 0.21
PTK7-218ENST00000493339 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
PTK7-218ENST00000493339 POLR3AO14802 1390 aaPredicted RBP16.38■□□□□ 0.21
PTK7-218ENST00000493339 RBSNQ9H1K0 784 aa16.38■□□□□ 0.21
PTK7-218ENST00000493339 NOL7Q9UMY1 257 aaKnown RBP16.38■□□□□ 0.21
PTK7-218ENST00000493339 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.37■□□□□ 0.21
PTK7-218ENST00000493339 EXOSC9Q06265 439 aaKnown RBP16.37■□□□□ 0.21
PTK7-218ENST00000493339 ZSCAN23Q3MJ62 389 aa16.37■□□□□ 0.21
PTK7-218ENST00000493339 RNF17Q9BXT8 1623 aaKnown RBP16.37■□□□□ 0.21
PTK7-218ENST00000493339 TMEM57Q8N5G2 664 aa16.36■□□□□ 0.21
PTK7-218ENST00000493339 SSH1Q8WYL5 1049 aa16.36■□□□□ 0.21
PTK7-218ENST00000493339 ZNF500O60304 480 aaPredicted RBP16.35■□□□□ 0.21
PTK7-218ENST00000493339 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
PTK7-218ENST00000493339 TMEM132AQ24JP5 1023 aa16.35■□□□□ 0.21
PTK7-218ENST00000493339 NOB1Q9ULX3 412 aaKnown RBP16.35■□□□□ 0.21
PTK7-218ENST00000493339 U2AF1L5P0DN76 240 aaPredicted RBP16.35■□□□□ 0.21
PTK7-218ENST00000493339 MTHFSP49914 203 aa16.35■□□□□ 0.21
PTK7-218ENST00000493339 U2AF1Q01081 240 aaKnown RBP eCLIP16.35■□□□□ 0.21
PTK7-218ENST00000493339 ATF7IPQ6VMQ6 1270 aa16.35■□□□□ 0.21
PTK7-218ENST00000493339 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
PTK7-218ENST00000493339 ATP10BO94823 1461 aa16.34■□□□□ 0.21
PTK7-218ENST00000493339 NUCB1Q02818 461 aa16.34■□□□□ 0.21
PTK7-218ENST00000493339 CHD1LQ86WJ1 897 aa16.34■□□□□ 0.21
PTK7-218ENST00000493339 RBM27Q9P2N5 1060 aaKnown RBP16.34■□□□□ 0.21
PTK7-218ENST00000493339 GRIN2AQ12879 1464 aa16.34■□□□□ 0.21
PTK7-218ENST00000493339 MYOM1P52179 1685 aa16.34■□□□□ 0.21
PTK7-218ENST00000493339 JPH4Q96JJ6 628 aa16.34■□□□□ 0.21
PTK7-218ENST00000493339 ARHGEF5Q12774 1597 aa16.33■□□□□ 0.21
PTK7-218ENST00000493339 ZNF445P59923 1031 aa16.33■□□□□ 0.21
PTK7-218ENST00000493339 CFAP70Q5T0N1 1121 aa16.33■□□□□ 0.21
PTK7-218ENST00000493339 ANKRD45Q5TZF3 282 aa16.33■□□□□ 0.21
PTK7-218ENST00000493339 IBTKQ9P2D0 1353 aaPredicted RBP16.33■□□□□ 0.2
PTK7-218ENST00000493339 RSPH4AQ5TD94 716 aa16.33■□□□□ 0.2
PTK7-218ENST00000493339 SMAP1Q8IYB5 467 aaPredicted RBP16.33■□□□□ 0.2
PTK7-218ENST00000493339 ZKSCAN5Q9Y2L8 839 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms