RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 HS3ST6Q96QI5 342 aa14.4□□□□□ -0.1
PTPRC-212ENST00000491302 HELBQ8NG08 1087 aaPredicted RBP14.39□□□□□ -0.11
PTPRC-212ENST00000491302 GDPD2Q9HCC8 539 aa14.39□□□□□ -0.11
PTPRC-212ENST00000491302 GUCA2AQ02747 115 aa14.38□□□□□ -0.11
PTPRC-212ENST00000491302 SERPINA10Q9UK55 444 aa14.38□□□□□ -0.11
PTPRC-212ENST00000491302 HLA-CQ95604 372 aa14.36□□□□□ -0.11
PTPRC-212ENST00000491302 CCDC97Q96F63 343 aaPredicted RBP14.36□□□□□ -0.11
PTPRC-212ENST00000491302 LRCH3Q96II8 777 aa14.36□□□□□ -0.11
PTPRC-212ENST00000491302 C6orf229H3BNL8 230 aa14.35□□□□□ -0.11
PTPRC-212ENST00000491302 PRR14Q9BWN1 585 aa14.35□□□□□ -0.11
PTPRC-212ENST00000491302 ADGRD1Q6QNK2 874 aa14.34□□□□□ -0.11
PTPRC-212ENST00000491302 ABL2P42684 1182 aa14.33□□□□□ -0.12
PTPRC-212ENST00000491302 LSM11P83369 360 aaKnown RBP eCLIP14.33□□□□□ -0.12
PTPRC-212ENST00000491302 STAC3Q96MF2 364 aa14.33□□□□□ -0.12
PTPRC-212ENST00000491302 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.33□□□□□ -0.12
PTPRC-212ENST00000491302 NDUFB9Q9Y6M9 179 aa14.33□□□□□ -0.12
PTPRC-212ENST00000491302 CTDSPL2Q05D32 466 aa14.31□□□□□ -0.12
PTPRC-212ENST00000491302 TSC1Q92574 1164 aa14.31□□□□□ -0.12
PTPRC-212ENST00000491302 PLSCR2Q9NRY7 297 aa14.31□□□□□ -0.12
PTPRC-212ENST00000491302 TBC1D2BQ9UPU7 963 aa14.31□□□□□ -0.12
PTPRC-212ENST00000491302 ACTN4O43707 911 aaKnown RBP14.3□□□□□ -0.12
PTPRC-212ENST00000491302 GOLGA8CPA6NN73 597 aa14.29□□□□□ -0.12
PTPRC-212ENST00000491302 Q3C1V9 767 aa14.29□□□□□ -0.12
PTPRC-212ENST00000491302 GJD4Q96KN9 370 aaPredicted RBP14.29□□□□□ -0.12
PTPRC-212ENST00000491302 ANKK1Q8NFD2 765 aa14.28□□□□□ -0.12
PTPRC-212ENST00000491302 CFAP99D6REC4 459 aa14.27□□□□□ -0.13
PTPRC-212ENST00000491302 HRO43593 1189 aa14.26□□□□□ -0.13
PTPRC-212ENST00000491302 MORN1Q5T089 497 aa14.26□□□□□ -0.13
PTPRC-212ENST00000491302 RETREG3Q86VR2 466 aa14.26□□□□□ -0.13
PTPRC-212ENST00000491302 WASHC4Q2M389 1173 aa14.25□□□□□ -0.13
PTPRC-212ENST00000491302 PRR7Q8TB68 274 aa14.25□□□□□ -0.13
PTPRC-212ENST00000491302 PPP4CP60510 307 aa14.24□□□□□ -0.13
PTPRC-212ENST00000491302 POTEGQ6S5H5 508 aa14.24□□□□□ -0.13
PTPRC-212ENST00000491302 POTEMA6NI47 508 aa14.23□□□□□ -0.13
PTPRC-212ENST00000491302 CALR3Q96L12 384 aaKnown RBP14.23□□□□□ -0.13
PTPRC-212ENST00000491302 DESI1Q6ICB0 168 aa14.22□□□□□ -0.13
PTPRC-212ENST00000491302 SYMPKQ92797 1274 aaKnown RBP14.22□□□□□ -0.13
PTPRC-212ENST00000491302 HMX1Q9NP08 348 aaPredicted RBP14.22□□□□□ -0.13
PTPRC-212ENST00000491302 SLC27A5Q9Y2P5 690 aa14.22□□□□□ -0.13
PTPRC-212ENST00000491302 SOWAHBA6NEL2 793 aa14.21□□□□□ -0.13
PTPRC-212ENST00000491302 PUS10Q3MIT2 529 aaKnown RBP14.21□□□□□ -0.13
PTPRC-212ENST00000491302 LRRN4Q8WUT4 740 aa14.21□□□□□ -0.13
PTPRC-212ENST00000491302 TRIM34Q9BYJ4 488 aa14.21□□□□□ -0.13
PTPRC-212ENST00000491302 ANKRD13DQ6ZTN6 518 aa14.19□□□□□ -0.14
PTPRC-212ENST00000491302 KRTAP3-3Q9BYR6 98 aa14.19□□□□□ -0.14
PTPRC-212ENST00000491302 KRTAP3-2Q9BYR7 98 aa14.19□□□□□ -0.14
PTPRC-212ENST00000491302 TSR3Q9UJK0 312 aaKnown RBP14.19□□□□□ -0.14
PTPRC-212ENST00000491302 SALL2Q9Y467 1007 aaPredicted RBP14.19□□□□□ -0.14
PTPRC-212ENST00000491302 HPS5Q9UPZ3 1129 aa14.18□□□□□ -0.14
PTPRC-212ENST00000491302 IRF5Q13568 498 aa14.17□□□□□ -0.14
PTPRC-212ENST00000491302 PNMA1Q8ND90 353 aa14.17□□□□□ -0.14
PTPRC-212ENST00000491302 GLMNQ92990 594 aa14.17□□□□□ -0.14
PTPRC-212ENST00000491302 POM121CA8CG34 1229 aa14.15□□□□□ -0.14
PTPRC-212ENST00000491302 NR1I2O75469 434 aa14.14□□□□□ -0.15
PTPRC-212ENST00000491302 PDIA4P13667 645 aaKnown RBP14.14□□□□□ -0.15
PTPRC-212ENST00000491302 WNT2BQ93097 391 aa14.14□□□□□ -0.15
PTPRC-212ENST00000491302 USB1Q9BQ65 265 aaKnown RBP14.14□□□□□ -0.15
PTPRC-212ENST00000491302 PCDHB3Q9Y5E6 796 aa14.14□□□□□ -0.15
PTPRC-212ENST00000491302 FMNL1O95466 1100 aaPredicted RBP14.12□□□□□ -0.15
PTPRC-212ENST00000491302 BCAMP50895 628 aa14.12□□□□□ -0.15
PTPRC-212ENST00000491302 BRICD5Q6PL45 260 aa14.12□□□□□ -0.15
PTPRC-212ENST00000491302 LYPD8Q6UX82 237 aa14.12□□□□□ -0.15
PTPRC-212ENST00000491302 APLP1P51693 650 aa14.11□□□□□ -0.15
PTPRC-212ENST00000491302 NR6A1Q15406 480 aa14.11□□□□□ -0.15
PTPRC-212ENST00000491302 SCUBE3Q8IX30 993 aa14.11□□□□□ -0.15
PTPRC-212ENST00000491302 PER1O15534 1290 aaPredicted RBP14.1□□□□□ -0.15
PTPRC-212ENST00000491302 HDGFL1Q5TGJ6 251 aa14.1□□□□□ -0.15
PTPRC-212ENST00000491302 BLOC1S3Q6QNY0 202 aa14.1□□□□□ -0.15
PTPRC-212ENST00000491302 RNF19BQ6ZMZ0 732 aa14.1□□□□□ -0.15
PTPRC-212ENST00000491302 CDAN1Q8IWY9 1227 aa14.1□□□□□ -0.15
PTPRC-212ENST00000491302 GPR37L1O60883 481 aa14.09□□□□□ -0.15
PTPRC-212ENST00000491302 PPP1R15AO75807 674 aaPredicted RBP14.09□□□□□ -0.15
PTPRC-212ENST00000491302 SOX11P35716 441 aa14.09□□□□□ -0.15
PTPRC-212ENST00000491302 EPS8L1Q8TE68 723 aa14.09□□□□□ -0.15
PTPRC-212ENST00000491302 VAC14Q08AM6 782 aa14.08□□□□□ -0.16
PTPRC-212ENST00000491302 THAP11Q96EK4 314 aa14.05□□□□□ -0.16
PTPRC-212ENST00000491302 ACIN1Q9UKV3 1341 aaKnown RBP14.04□□□□□ -0.16
PTPRC-212ENST00000491302 JUNDP17535 347 aa14.03□□□□□ -0.16
PTPRC-212ENST00000491302 PTPRNQ16849 979 aa14.02□□□□□ -0.17
PTPRC-212ENST00000491302 ADAMTS19Q8TE59 1207 aa14.02□□□□□ -0.17
PTPRC-212ENST00000491302 ALG2Q9H553 416 aa14.02□□□□□ -0.17
PTPRC-212ENST00000491302 WBP1LQ9NX94 342 aa14.02□□□□□ -0.17
PTPRC-212ENST00000491302 EIF4G2P78344 907 aaKnown RBP eCLIP14.01□□□□□ -0.17
PTPRC-212ENST00000491302 SEMA3FQ13275 785 aa14.01□□□□□ -0.17
PTPRC-212ENST00000491302 NYAP1Q6ZVC0 841 aa14.01□□□□□ -0.17
PTPRC-212ENST00000491302 ZC3H4Q9UPT8 1303 aaKnown RBP14□□□□□ -0.17
PTPRC-212ENST00000491302 MSS51Q4VC12 460 aa14□□□□□ -0.17
PTPRC-212ENST00000491302 PDE4CQ08493 712 aa13.98□□□□□ -0.17
PTPRC-212ENST00000491302 THSD4Q6ZMP0 1018 aa13.98□□□□□ -0.17
PTPRC-212ENST00000491302 FKBPLQ9UIM3 349 aa13.98□□□□□ -0.17
PTPRC-212ENST00000491302 F12P00748 615 aaPredicted RBP13.97□□□□□ -0.17
PTPRC-212ENST00000491302 NR1H3Q13133 447 aa13.97□□□□□ -0.17
PTPRC-212ENST00000491302 SPSB2Q99619 263 aa13.97□□□□□ -0.17
PTPRC-212ENST00000491302 TRAIPQ9BWF2 469 aa13.97□□□□□ -0.17
PTPRC-212ENST00000491302 TRIM26Q12899 539 aaPredicted RBP13.96□□□□□ -0.17
PTPRC-212ENST00000491302 PBXIP1Q96AQ6 731 aa13.96□□□□□ -0.17
PTPRC-212ENST00000491302 PPP1R12CQ9BZL4 782 aa13.96□□□□□ -0.17
PTPRC-212ENST00000491302 PODXL2Q9NZ53 605 aa13.96□□□□□ -0.17
PTPRC-212ENST00000491302 ARMC2Q8NEN0 867 aa13.95□□□□□ -0.18
PTPRC-212ENST00000491302 ZBBXA8MT70 800 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms