RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 RALGAPBQ86X10 1494 aa13.62□□□□□ -0.23
SUPT20H-220ENST00000490716 LRP6O75581 1613 aa13.62□□□□□ -0.23
SUPT20H-220ENST00000490716 MSH6P52701 1360 aa13.62□□□□□ -0.23
SUPT20H-220ENST00000490716 C19orf44Q9H6X5 657 aa13.61□□□□□ -0.23
SUPT20H-220ENST00000490716 ATP7BP35670 1465 aa13.6□□□□□ -0.23
SUPT20H-220ENST00000490716 ANKARQ7Z5J8 1434 aa13.59□□□□□ -0.23
SUPT20H-220ENST00000490716 TOM1O60784 492 aa13.59□□□□□ -0.23
SUPT20H-220ENST00000490716 CHGAP10645 457 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-220ENST00000490716 ZNF326Q5BKZ1 582 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-220ENST00000490716 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
SUPT20H-220ENST00000490716 HSPA1LP34931 641 aa13.59□□□□□ -0.23
SUPT20H-220ENST00000490716 UBAP1LF5GYI3 381 aa13.58□□□□□ -0.23
SUPT20H-220ENST00000490716 PROSER2Q86WR7 435 aaPredicted RBP13.58□□□□□ -0.23
SUPT20H-220ENST00000490716 CFAP70Q5T0N1 1121 aa13.58□□□□□ -0.24
SUPT20H-220ENST00000490716 PPP1R15AO75807 674 aaPredicted RBP13.58□□□□□ -0.24
SUPT20H-220ENST00000490716 SLAIN2Q9P270 581 aa13.58□□□□□ -0.24
SUPT20H-220ENST00000490716 RBM33Q96EV2 1170 aaKnown RBP13.57□□□□□ -0.24
SUPT20H-220ENST00000490716 NRAPQ86VF7 1730 aa13.57□□□□□ -0.24
SUPT20H-220ENST00000490716 PHRF1Q9P1Y6 1649 aaKnown RBP13.57□□□□□ -0.24
SUPT20H-220ENST00000490716 BRINP3Q76B58 766 aa13.57□□□□□ -0.24
SUPT20H-220ENST00000490716 MYOM1P52179 1685 aa13.56□□□□□ -0.24
SUPT20H-220ENST00000490716 SOS2Q07890 1332 aaPredicted RBP13.55□□□□□ -0.24
SUPT20H-220ENST00000490716 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
SUPT20H-220ENST00000490716 TMEM132EQ6IEE7 984 aa13.53□□□□□ -0.24
SUPT20H-220ENST00000490716 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
SUPT20H-220ENST00000490716 L3MBTL2Q969R5 705 aa13.53□□□□□ -0.24
SUPT20H-220ENST00000490716 NWD2Q9ULI1 1742 aa13.53□□□□□ -0.24
SUPT20H-220ENST00000490716 PLCH1Q4KWH8 1693 aa13.52□□□□□ -0.24
SUPT20H-220ENST00000490716 CADPS2Q86UW7 1296 aa13.52□□□□□ -0.24
SUPT20H-220ENST00000490716 SIN3AQ96ST3 1273 aa13.52□□□□□ -0.24
SUPT20H-220ENST00000490716 CLSPNQ9HAW4 1339 aa13.52□□□□□ -0.24
SUPT20H-220ENST00000490716 NBPF8Q3BBV2 869 aa13.52□□□□□ -0.25
SUPT20H-220ENST00000490716 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
SUPT20H-220ENST00000490716 DCAF11Q8TEB1 546 aa13.51□□□□□ -0.25
SUPT20H-220ENST00000490716 WAPLQ7Z5K2 1190 aa13.51□□□□□ -0.25
SUPT20H-220ENST00000490716 PIK3C2AO00443 1686 aa13.5□□□□□ -0.25
SUPT20H-220ENST00000490716 CD163L1Q9NR16 1453 aa13.5□□□□□ -0.25
SUPT20H-220ENST00000490716 COL18A1P39060 1754 aa13.5□□□□□ -0.25
SUPT20H-220ENST00000490716 POLR3AO14802 1390 aaPredicted RBP13.49□□□□□ -0.25
SUPT20H-220ENST00000490716 PRR36Q9H6K5 1346 aa13.49□□□□□ -0.25
SUPT20H-220ENST00000490716 LMO7Q8WWI1 1683 aa13.49□□□□□ -0.25
SUPT20H-220ENST00000490716 RGS17Q9UGC6 210 aaPredicted RBP13.49□□□□□ -0.25
SUPT20H-220ENST00000490716 PNPLA6Q8IY17 1366 aa13.49□□□□□ -0.25
SUPT20H-220ENST00000490716 NBPF1Q3BBV0 1214 aa13.49□□□□□ -0.25
SUPT20H-220ENST00000490716 WNK3Q9BYP7 1800 aa13.46□□□□□ -0.25
SUPT20H-220ENST00000490716 JCADQ9P266 1359 aa13.46□□□□□ -0.26
SUPT20H-220ENST00000490716 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
SUPT20H-220ENST00000490716 SLIT3O75094 1523 aa13.44□□□□□ -0.26
SUPT20H-220ENST00000490716 PRAM1Q96QH2 718 aa13.44□□□□□ -0.26
SUPT20H-220ENST00000490716 SBNO1A3KN83 1393 aa13.44□□□□□ -0.26
SUPT20H-220ENST00000490716 ORAI2Q96SN7 254 aa13.43□□□□□ -0.26
SUPT20H-220ENST00000490716 ANKRD26Q9UPS8 1709 aa13.43□□□□□ -0.26
SUPT20H-220ENST00000490716 CPSF1Q10570 1443 aaKnown RBP13.42□□□□□ -0.26
SUPT20H-220ENST00000490716 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
SUPT20H-220ENST00000490716 SPATA31A6Q5VVP1 1343 aa13.42□□□□□ -0.26
SUPT20H-220ENST00000490716 COL14A1Q05707 1796 aaKnown RBP13.41□□□□□ -0.26
SUPT20H-220ENST00000490716 TIMELESSQ9UNS1 1208 aa13.41□□□□□ -0.26
SUPT20H-220ENST00000490716 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
SUPT20H-220ENST00000490716 ATF3P18847 181 aa13.4□□□□□ -0.26
SUPT20H-220ENST00000490716 SLIT2O94813 1529 aa13.4□□□□□ -0.26
SUPT20H-220ENST00000490716 EP400Q96L91 3159 aa13.39□□□□□ -0.27
SUPT20H-220ENST00000490716 WASLO00401 505 aaPredicted RBP13.39□□□□□ -0.27
SUPT20H-220ENST00000490716 BCANQ96GW7 911 aa13.39□□□□□ -0.27
SUPT20H-220ENST00000490716 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
SUPT20H-220ENST00000490716 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
SUPT20H-220ENST00000490716 EIF3AQ14152 1382 aaKnown RBP13.38□□□□□ -0.27
SUPT20H-220ENST00000490716 TESK2Q96S53 571 aa13.38□□□□□ -0.27
SUPT20H-220ENST00000490716 GLI3P10071 1580 aa13.38□□□□□ -0.27
SUPT20H-220ENST00000490716 BRWD3Q6RI45 1802 aa13.37□□□□□ -0.27
SUPT20H-220ENST00000490716 NFAT5O94916 1531 aa13.37□□□□□ -0.27
SUPT20H-220ENST00000490716 PLEKHG3A1L390 1219 aa13.37□□□□□ -0.27
SUPT20H-220ENST00000490716 DDX17Q92841 729 aaKnown RBP13.37□□□□□ -0.27
SUPT20H-220ENST00000490716 SPATA31A3Q5VYP0 1347 aa13.37□□□□□ -0.27
SUPT20H-220ENST00000490716 ABCC6O95255 1503 aa13.37□□□□□ -0.27
SUPT20H-220ENST00000490716 KDM2AQ9Y2K7 1162 aa13.37□□□□□ -0.27
SUPT20H-220ENST00000490716 BCL9LQ86UU0 1499 aa13.37□□□□□ -0.27
SUPT20H-220ENST00000490716 STK26Q9P289 416 aa13.36□□□□□ -0.27
SUPT20H-220ENST00000490716 KIF20BQ96Q89 1820 aa13.36□□□□□ -0.27
SUPT20H-220ENST00000490716 RGPD5Q99666 1765 aa13.36□□□□□ -0.27
SUPT20H-220ENST00000490716 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
SUPT20H-220ENST00000490716 ILDR2Q71H61 639 aa13.35□□□□□ -0.27
SUPT20H-220ENST00000490716 BRD4O60885 1362 aaPredicted RBP13.35□□□□□ -0.27
SUPT20H-220ENST00000490716 PUS7Q96PZ0 661 aaKnown RBP13.35□□□□□ -0.27
SUPT20H-220ENST00000490716 ATRNO75882 1429 aa13.34□□□□□ -0.27
SUPT20H-220ENST00000490716 LTN1O94822 1766 aa13.34□□□□□ -0.27
SUPT20H-220ENST00000490716 CAMTA1Q9Y6Y1 1673 aa13.34□□□□□ -0.27
SUPT20H-220ENST00000490716 ROCK2O75116 1388 aaKnown RBP13.34□□□□□ -0.27
SUPT20H-220ENST00000490716 USP6P35125 1406 aa13.32□□□□□ -0.28
SUPT20H-220ENST00000490716 NPHP3Q7Z494 1330 aa13.32□□□□□ -0.28
SUPT20H-220ENST00000490716 CENPJQ9HC77 1338 aaPredicted RBP13.32□□□□□ -0.28
SUPT20H-220ENST00000490716 USP19O94966 1318 aa13.32□□□□□ -0.28
SUPT20H-220ENST00000490716 LRRC59Q96AG4 307 aaKnown RBP13.31□□□□□ -0.28
SUPT20H-220ENST00000490716 PEAK1Q9H792 1746 aa13.31□□□□□ -0.28
SUPT20H-220ENST00000490716 PPIP5K1Q6PFW1 1433 aa13.3□□□□□ -0.28
SUPT20H-220ENST00000490716 PARP4Q9UKK3 1724 aaKnown RBP13.3□□□□□ -0.28
SUPT20H-220ENST00000490716 FNBP4Q8N3X1 1017 aaPredicted RBP13.3□□□□□ -0.28
SUPT20H-220ENST00000490716 CDK19Q9BWU1 502 aa13.3□□□□□ -0.28
SUPT20H-220ENST00000490716 PHF8Q9UPP1 1060 aa13.29□□□□□ -0.28
SUPT20H-220ENST00000490716 TONSLQ96HA7 1378 aa13.28□□□□□ -0.28
SUPT20H-220ENST00000490716 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms