RNA–Protein interactions for RNA: ENST00000487942.1

SCAP-212, Transcript of SREBF chaperone, humanhuman

TSL 3

Gene SCAP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-212ENST00000487942 PLCD3Q8N3E9 789 aa11.28□□□□□ -0.6
SCAP-212ENST00000487942 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCAP-212ENST00000487942 SETD1AO15047 1707 aaKnown RBP11.28□□□□□ -0.6
SCAP-212ENST00000487942 XRN1Q8IZH2 1706 aaKnown RBP11.28□□□□□ -0.6
SCAP-212ENST00000487942 PLEKHG5O94827 1062 aa11.27□□□□□ -0.61
SCAP-212ENST00000487942 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
SCAP-212ENST00000487942 HDGFP51858 240 aaKnown RBP11.27□□□□□ -0.61
SCAP-212ENST00000487942 TRIM52Q96A61 297 aa11.27□□□□□ -0.61
SCAP-212ENST00000487942 TBX22Q9Y458 520 aa11.27□□□□□ -0.61
SCAP-212ENST00000487942 SETBP1Q9Y6X0 1596 aa11.27□□□□□ -0.61
SCAP-212ENST00000487942 PTPRUQ92729 1446 aa11.26□□□□□ -0.61
SCAP-212ENST00000487942 PHLPP1O60346 1717 aa11.26□□□□□ -0.61
SCAP-212ENST00000487942 CLCN6P51797 869 aa11.26□□□□□ -0.61
SCAP-212ENST00000487942 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
SCAP-212ENST00000487942 ZNF326Q5BKZ1 582 aaKnown RBP11.25□□□□□ -0.61
SCAP-212ENST00000487942 TSPYL2Q9H2G4 693 aaPredicted RBP11.25□□□□□ -0.61
SCAP-212ENST00000487942 FAM135BQ49AJ0 1406 aa11.24□□□□□ -0.61
SCAP-212ENST00000487942 IFT172Q9UG01 1749 aa11.23□□□□□ -0.61
SCAP-212ENST00000487942 MSH6P52701 1360 aa11.23□□□□□ -0.61
SCAP-212ENST00000487942 NALCNQ8IZF0 1738 aa11.23□□□□□ -0.61
SCAP-212ENST00000487942 METP08581 1390 aa11.22□□□□□ -0.61
SCAP-212ENST00000487942 AMOTL2Q9Y2J4 779 aa11.22□□□□□ -0.61
SCAP-212ENST00000487942 PIK3R4Q99570 1358 aa11.21□□□□□ -0.61
SCAP-212ENST00000487942 COL16A1Q07092 1604 aaPredicted RBP11.2□□□□□ -0.62
SCAP-212ENST00000487942 DCBLD2Q96PD2 775 aa11.2□□□□□ -0.62
SCAP-212ENST00000487942 SLAIN2Q9P270 581 aa11.2□□□□□ -0.62
SCAP-212ENST00000487942 SOCS7O14512 581 aa11.19□□□□□ -0.62
SCAP-212ENST00000487942 C14orf37Q86TY3 774 aa11.19□□□□□ -0.62
SCAP-212ENST00000487942 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
SCAP-212ENST00000487942 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
SCAP-212ENST00000487942 MPHOSPH9Q99550 1183 aa11.17□□□□□ -0.62
SCAP-212ENST00000487942 C19orf44Q9H6X5 657 aa11.16□□□□□ -0.62
SCAP-212ENST00000487942 RGS17Q9UGC6 210 aaPredicted RBP11.16□□□□□ -0.62
SCAP-212ENST00000487942 NHSL1Q5SYE7 1610 aa11.16□□□□□ -0.62
SCAP-212ENST00000487942 AHDC1Q5TGY3 1603 aaPredicted RBP11.16□□□□□ -0.62
SCAP-212ENST00000487942 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
SCAP-212ENST00000487942 CCDC61Q9Y6R9 512 aa11.15□□□□□ -0.62
SCAP-212ENST00000487942 SPATA31E1Q6ZUB1 1445 aa11.15□□□□□ -0.62
SCAP-212ENST00000487942 SETD5Q9C0A6 1442 aa11.15□□□□□ -0.62
SCAP-212ENST00000487942 SHPRHQ149N8 1683 aa11.14□□□□□ -0.63
SCAP-212ENST00000487942 ATF3P18847 181 aa11.14□□□□□ -0.63
SCAP-212ENST00000487942 CADPS2Q86UW7 1296 aa11.14□□□□□ -0.63
SCAP-212ENST00000487942 CCDC144AA2RUR9 1427 aa11.14□□□□□ -0.63
SCAP-212ENST00000487942 MST1RQ04912 1400 aa11.14□□□□□ -0.63
SCAP-212ENST00000487942 ADGRL3Q9HAR2 1447 aa11.13□□□□□ -0.63
SCAP-212ENST00000487942 VGFO15240 615 aaPredicted RBP11.13□□□□□ -0.63
SCAP-212ENST00000487942 RGL3Q3MIN7 710 aa11.13□□□□□ -0.63
SCAP-212ENST00000487942 MS4A3Q96HJ5 214 aa11.13□□□□□ -0.63
SCAP-212ENST00000487942 ASXL1Q8IXJ9 1541 aa11.13□□□□□ -0.63
SCAP-212ENST00000487942 RAB3GAP2Q9H2M9 1393 aa11.13□□□□□ -0.63
SCAP-212ENST00000487942 ROBO2Q9HCK4 1378 aa11.13□□□□□ -0.63
SCAP-212ENST00000487942 RPGRIP1LQ68CZ1 1315 aa11.12□□□□□ -0.63
SCAP-212ENST00000487942 ADGRF5Q8IZF2 1346 aa11.12□□□□□ -0.63
SCAP-212ENST00000487942 DCCP43146 1447 aa11.12□□□□□ -0.63
SCAP-212ENST00000487942 BRINP3Q76B58 766 aa11.12□□□□□ -0.63
SCAP-212ENST00000487942 ZBTB47Q9UFB7 747 aaPredicted RBP11.12□□□□□ -0.63
SCAP-212ENST00000487942 RGPD8O14715 1765 aaPredicted RBP11.12□□□□□ -0.63
SCAP-212ENST00000487942 KNDC1Q76NI1 1749 aa11.12□□□□□ -0.63
SCAP-212ENST00000487942 LRP6O75581 1613 aa11.11□□□□□ -0.63
SCAP-212ENST00000487942 NUBP1P53384 320 aa11.11□□□□□ -0.63
SCAP-212ENST00000487942 JCADQ9P266 1359 aa11.11□□□□□ -0.63
SCAP-212ENST00000487942 PTCH1Q13635 1447 aa11.1□□□□□ -0.63
SCAP-212ENST00000487942 LHX8Q68G74 356 aa11.1□□□□□ -0.63
SCAP-212ENST00000487942 DDX17Q92841 729 aaKnown RBP11.09□□□□□ -0.63
SCAP-212ENST00000487942 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
SCAP-212ENST00000487942 LAMC1P11047 1609 aa11.09□□□□□ -0.63
SCAP-212ENST00000487942 PRAG1Q86YV5 1406 aa11.09□□□□□ -0.63
SCAP-212ENST00000487942 POTEAQ6S8J7 498 aa11.08□□□□□ -0.64
SCAP-212ENST00000487942 PIK3C2GO75747 1445 aa11.07□□□□□ -0.64
SCAP-212ENST00000487942 C1orf167Q5SNV9 1468 aa11.06□□□□□ -0.64
SCAP-212ENST00000487942 ANKRD30BQ9BXX2 1392 aa11.06□□□□□ -0.64
SCAP-212ENST00000487942 VASPP50552 380 aaPredicted RBP11.06□□□□□ -0.64
SCAP-212ENST00000487942 TMEM132EQ6IEE7 984 aa11.06□□□□□ -0.64
SCAP-212ENST00000487942 STK26Q9P289 416 aa11.06□□□□□ -0.64
SCAP-212ENST00000487942 CDC42BPGQ6DT37 1551 aa11.06□□□□□ -0.64
SCAP-212ENST00000487942 FMN2Q9NZ56 1722 aa11.06□□□□□ -0.64
SCAP-212ENST00000487942 NRXN1Q9ULB1 1477 aa11.05□□□□□ -0.64
SCAP-212ENST00000487942 PLEKHH1Q9ULM0 1364 aa11.04□□□□□ -0.64
SCAP-212ENST00000487942 TECPR2O15040 1411 aa11.04□□□□□ -0.64
SCAP-212ENST00000487942 MAP3K13O43283 966 aa11.04□□□□□ -0.64
SCAP-212ENST00000487942 WAPLQ7Z5K2 1190 aa11.04□□□□□ -0.64
SCAP-212ENST00000487942 PELP1Q8IZL8 1130 aaKnown RBP11.04□□□□□ -0.64
SCAP-212ENST00000487942 ORAI2Q96SN7 254 aa11.04□□□□□ -0.64
SCAP-212ENST00000487942 SPATA31A6Q5VVP1 1343 aa11.04□□□□□ -0.64
SCAP-212ENST00000487942 LRPPRCP42704 1394 aaKnown RBP11.03□□□□□ -0.64
SCAP-212ENST00000487942 NUTM2BA6NNL0 878 aaPredicted RBP11.03□□□□□ -0.64
SCAP-212ENST00000487942 NUTM2EB1AL46 878 aaPredicted RBP11.03□□□□□ -0.64
SCAP-212ENST00000487942 NUTM2AQ8IVF1 878 aaPredicted RBP11.03□□□□□ -0.64
SCAP-212ENST00000487942 MYOM2P54296 1465 aa11.03□□□□□ -0.64
SCAP-212ENST00000487942 MARF1Q9Y4F3 1742 aaKnown RBP11.03□□□□□ -0.64
SCAP-212ENST00000487942 YTHDC2Q9H6S0 1430 aaKnown RBP11.02□□□□□ -0.64
SCAP-212ENST00000487942 PNPLA6Q8IY17 1366 aa11.02□□□□□ -0.65
SCAP-212ENST00000487942 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
SCAP-212ENST00000487942 MEX3CQ5U5Q3 659 aaKnown RBP11.01□□□□□ -0.65
SCAP-212ENST00000487942 C14orf93Q9H972 538 aaKnown RBP11.01□□□□□ -0.65
SCAP-212ENST00000487942 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
SCAP-212ENST00000487942 ACIN1Q9UKV3 1341 aaKnown RBP11.01□□□□□ -0.65
SCAP-212ENST00000487942 ABCC11Q96J66 1382 aa11.01□□□□□ -0.65
SCAP-212ENST00000487942 COL22A1Q8NFW1 1626 aaPredicted RBP11□□□□□ -0.65
SCAP-212ENST00000487942 NUTM2FA1L443 756 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms