RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 C3orf80F5H4A9 247 aa10.51□□□□□ -0.73
SEC22C-215ENST00000487701 IFFO2Q5TF58 517 aa10.51□□□□□ -0.73
SEC22C-215ENST00000487701 MAP3K4Q9Y6R4 1608 aa10.51□□□□□ -0.73
SEC22C-215ENST00000487701 ATP10BO94823 1461 aa10.5□□□□□ -0.73
SEC22C-215ENST00000487701 WDR7Q9Y4E6 1490 aa10.5□□□□□ -0.73
SEC22C-215ENST00000487701 GPIHBP1Q8IV16 184 aa10.5□□□□□ -0.73
SEC22C-215ENST00000487701 TTC13Q8NBP0 860 aa10.5□□□□□ -0.73
SEC22C-215ENST00000487701 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
SEC22C-215ENST00000487701 EPRSP07814 1512 aaKnown RBP10.49□□□□□ -0.73
SEC22C-215ENST00000487701 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.49□□□□□ -0.73
SEC22C-215ENST00000487701 SOWAHBA6NEL2 793 aa10.48□□□□□ -0.73
SEC22C-215ENST00000487701 ARID3CA6NKF2 412 aa10.48□□□□□ -0.73
SEC22C-215ENST00000487701 FAM69CQ0P6D2 419 aa10.48□□□□□ -0.73
SEC22C-215ENST00000487701 PCF11O94913 1555 aaKnown RBP10.48□□□□□ -0.73
SEC22C-215ENST00000487701 HECW1Q76N89 1606 aa10.47□□□□□ -0.73
SEC22C-215ENST00000487701 CFAP43Q8NDM7 1665 aa10.47□□□□□ -0.73
SEC22C-215ENST00000487701 HIC1Q14526 733 aa10.47□□□□□ -0.73
SEC22C-215ENST00000487701 FMN1Q68DA7 1419 aa10.47□□□□□ -0.73
SEC22C-215ENST00000487701 CDK13Q14004 1512 aaKnown RBP10.47□□□□□ -0.73
SEC22C-215ENST00000487701 RNF40O75150 1001 aa10.46□□□□□ -0.73
SEC22C-215ENST00000487701 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.73
SEC22C-215ENST00000487701 SAMD7Q7Z3H4 446 aa10.46□□□□□ -0.73
SEC22C-215ENST00000487701 CLIP1P30622 1438 aa10.46□□□□□ -0.74
SEC22C-215ENST00000487701 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
SEC22C-215ENST00000487701 FAM161AQ3B820 660 aa10.45□□□□□ -0.74
SEC22C-215ENST00000487701 ABCA9Q8IUA7 1624 aa10.44□□□□□ -0.74
SEC22C-215ENST00000487701 GNPATO15228 680 aa10.44□□□□□ -0.74
SEC22C-215ENST00000487701 RBM46Q8TBY0 533 aaKnown RBP10.44□□□□□ -0.74
SEC22C-215ENST00000487701 HPS5Q9UPZ3 1129 aa10.44□□□□□ -0.74
SEC22C-215ENST00000487701 ADGRG1Q9Y653 693 aa10.44□□□□□ -0.74
SEC22C-215ENST00000487701 CEP162Q5TB80 1403 aa10.43□□□□□ -0.74
SEC22C-215ENST00000487701 GPR37O15354 613 aa10.43□□□□□ -0.74
SEC22C-215ENST00000487701 LOC105371045A0A1W2PR82 267 aa10.42□□□□□ -0.74
SEC22C-215ENST00000487701 WBP1LQ9NX94 342 aa10.42□□□□□ -0.74
SEC22C-215ENST00000487701 TSR3Q9UJK0 312 aaKnown RBP10.42□□□□□ -0.74
SEC22C-215ENST00000487701 KDM6BO15054 1643 aa10.41□□□□□ -0.74
SEC22C-215ENST00000487701 EYA1Q99502 592 aa10.41□□□□□ -0.74
SEC22C-215ENST00000487701 FYCO1Q9BQS8 1478 aa10.41□□□□□ -0.74
SEC22C-215ENST00000487701 CASKIN1Q8WXD9 1431 aa10.41□□□□□ -0.74
SEC22C-215ENST00000487701 TTC37Q6PGP7 1564 aa10.4□□□□□ -0.74
SEC22C-215ENST00000487701 RGS20O76081 388 aa10.4□□□□□ -0.74
SEC22C-215ENST00000487701 FECHP22830 423 aa10.4□□□□□ -0.74
SEC22C-215ENST00000487701 SWT1Q5T5J6 900 aaKnown RBP10.4□□□□□ -0.74
SEC22C-215ENST00000487701 KIF14Q15058 1648 aa10.4□□□□□ -0.75
SEC22C-215ENST00000487701 A0A0G2JS52 829 aa10.39□□□□□ -0.75
SEC22C-215ENST00000487701 SLC4A3P48751 1232 aa10.39□□□□□ -0.75
SEC22C-215ENST00000487701 PPP4CP60510 307 aa10.39□□□□□ -0.75
SEC22C-215ENST00000487701 NYAP1Q6ZVC0 841 aa10.39□□□□□ -0.75
SEC22C-215ENST00000487701 DNAJB2P25686 324 aa10.38□□□□□ -0.75
SEC22C-215ENST00000487701 MAGI3Q5TCQ9 1506 aa10.38□□□□□ -0.75
SEC22C-215ENST00000487701 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.38□□□□□ -0.75
SEC22C-215ENST00000487701 CCDC18Q5T9S5 1454 aa10.37□□□□□ -0.75
SEC22C-215ENST00000487701 TEX14Q8IWB6 1497 aa10.37□□□□□ -0.75
SEC22C-215ENST00000487701 ITGBL1O95965 494 aaPredicted RBP10.37□□□□□ -0.75
SEC22C-215ENST00000487701 OATP04181 439 aa10.37□□□□□ -0.75
SEC22C-215ENST00000487701 LMOD2Q6P5Q4 547 aa10.37□□□□□ -0.75
SEC22C-215ENST00000487701 CD109Q6YHK3 1445 aa10.37□□□□□ -0.75
SEC22C-215ENST00000487701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.37□□□□□ -0.75
SEC22C-215ENST00000487701 MYO5CQ9NQX4 1742 aa10.36□□□□□ -0.75
SEC22C-215ENST00000487701 RCCD1A6NED2 376 aa10.36□□□□□ -0.75
SEC22C-215ENST00000487701 SLF2Q8IX21 1173 aa10.36□□□□□ -0.75
SEC22C-215ENST00000487701 ATP1B4Q9UN42 357 aaPredicted RBP10.35□□□□□ -0.75
SEC22C-215ENST00000487701 COL17A1Q9UMD9 1497 aaPredicted RBP10.35□□□□□ -0.75
SEC22C-215ENST00000487701 METTL3Q86U44 580 aaKnown RBP10.34□□□□□ -0.75
SEC22C-215ENST00000487701 PXYLP1Q8TE99 480 aa10.34□□□□□ -0.75
SEC22C-215ENST00000487701 TMEM134Q9H6X4 195 aa10.34□□□□□ -0.75
SEC22C-215ENST00000487701 TROQ12816 1431 aaPredicted RBP10.33□□□□□ -0.76
SEC22C-215ENST00000487701 CDC42BPAQ5VT25 1732 aa10.33□□□□□ -0.76
SEC22C-215ENST00000487701 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.33□□□□□ -0.76
SEC22C-215ENST00000487701 PLEKHD1A6NEE1 506 aa10.33□□□□□ -0.76
SEC22C-215ENST00000487701 NECTIN2Q92692 538 aa10.33□□□□□ -0.76
SEC22C-215ENST00000487701 CDC42BPBQ9Y5S2 1711 aa10.33□□□□□ -0.76
SEC22C-215ENST00000487701 CFAP74Q9C0B2 1584 aa10.32□□□□□ -0.76
SEC22C-215ENST00000487701 VPS8Q8N3P4 1428 aa10.31□□□□□ -0.76
SEC22C-215ENST00000487701 FRMPD1Q5SYB0 1578 aa10.31□□□□□ -0.76
SEC22C-215ENST00000487701 RICTORQ6R327 1708 aa10.3□□□□□ -0.76
SEC22C-215ENST00000487701 PREX2Q70Z35 1606 aa10.3□□□□□ -0.76
SEC22C-215ENST00000487701 MAP2K5Q13163 448 aa10.3□□□□□ -0.76
SEC22C-215ENST00000487701 NEO1Q92859 1461 aa10.3□□□□□ -0.76
SEC22C-215ENST00000487701 ARAP3Q8WWN8 1544 aa10.29□□□□□ -0.76
SEC22C-215ENST00000487701 KCNC4Q03721 635 aa10.29□□□□□ -0.76
SEC22C-215ENST00000487701 NLRP7Q8WX94 980 aa10.29□□□□□ -0.76
SEC22C-215ENST00000487701 TIAM1Q13009 1591 aa10.29□□□□□ -0.76
SEC22C-215ENST00000487701 FANCAO15360 1455 aa10.28□□□□□ -0.76
SEC22C-215ENST00000487701 APLP1P51693 650 aa10.27□□□□□ -0.77
SEC22C-215ENST00000487701 CDK11AQ9UQ88 783 aaPredicted RBP10.27□□□□□ -0.77
SEC22C-215ENST00000487701 EHBP1L1Q8N3D4 1523 aa10.27□□□□□ -0.77
SEC22C-215ENST00000487701 PLCH2O75038 1416 aa10.26□□□□□ -0.77
SEC22C-215ENST00000487701 ITSN2Q9NZM3 1697 aa10.25□□□□□ -0.77
SEC22C-215ENST00000487701 AKNAQ7Z591 1439 aa10.24□□□□□ -0.77
SEC22C-215ENST00000487701 SUPT6HQ7KZ85 1726 aaKnown RBP10.24□□□□□ -0.77
SEC22C-215ENST00000487701 ARHGAP5Q13017 1502 aa10.24□□□□□ -0.77
SEC22C-215ENST00000487701 KRI1Q8N9T8 703 aaKnown RBP10.24□□□□□ -0.77
SEC22C-215ENST00000487701 CCDC102AQ96A19 550 aa10.24□□□□□ -0.77
SEC22C-215ENST00000487701 PHOX2BQ99453 314 aa10.24□□□□□ -0.77
SEC22C-215ENST00000487701 PRR14Q9BWN1 585 aa10.24□□□□□ -0.77
SEC22C-215ENST00000487701 MINK1Q8N4C8 1332 aaPredicted RBP10.24□□□□□ -0.77
SEC22C-215ENST00000487701 PHLDB1Q86UU1 1377 aa10.24□□□□□ -0.77
SEC22C-215ENST00000487701 IRF6O14896 467 aa10.23□□□□□ -0.77
SEC22C-215ENST00000487701 CFHP08603 1231 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms