RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.55□□□□□ -0.88
PRPF38A-203ENST00000487160 USP17L8P0C7I0 530 aa9.54□□□□□ -0.88
PRPF38A-203ENST00000487160 ZNF777Q9ULD5 760 aaPredicted RBP9.54□□□□□ -0.88
PRPF38A-203ENST00000487160 C6orf229H3BNL8 230 aa9.53□□□□□ -0.88
PRPF38A-203ENST00000487160 CTDSPL2Q05D32 466 aa9.53□□□□□ -0.88
PRPF38A-203ENST00000487160 STAC3Q96MF2 364 aa9.53□□□□□ -0.88
PRPF38A-203ENST00000487160 GDPD2Q9HCC8 539 aa9.53□□□□□ -0.88
PRPF38A-203ENST00000487160 GOLGA8CPA6NN73 597 aa9.52□□□□□ -0.89
PRPF38A-203ENST00000487160 SYMPKQ92797 1274 aaKnown RBP9.52□□□□□ -0.89
PRPF38A-203ENST00000487160 ACTN4O43707 911 aaKnown RBP9.51□□□□□ -0.89
PRPF38A-203ENST00000487160 PUS10Q3MIT2 529 aaKnown RBP9.51□□□□□ -0.89
PRPF38A-203ENST00000487160 TSC1Q92574 1164 aa9.51□□□□□ -0.89
PRPF38A-203ENST00000487160 NECTIN2Q92692 538 aa9.51□□□□□ -0.89
PRPF38A-203ENST00000487160 CFAP99D6REC4 459 aa9.5□□□□□ -0.89
PRPF38A-203ENST00000487160 SOCS7O14512 581 aa9.5□□□□□ -0.89
PRPF38A-203ENST00000487160 MORN1Q5T089 497 aa9.5□□□□□ -0.89
PRPF38A-203ENST00000487160 ANKK1Q8NFD2 765 aa9.5□□□□□ -0.89
PRPF38A-203ENST00000487160 PPP4CP60510 307 aa9.49□□□□□ -0.89
PRPF38A-203ENST00000487160 HELBQ8NG08 1087 aaPredicted RBP9.49□□□□□ -0.89
PRPF38A-203ENST00000487160 TBC1D2BQ9UPU7 963 aa9.49□□□□□ -0.89
PRPF38A-203ENST00000487160 SLC27A5Q9Y2P5 690 aa9.49□□□□□ -0.89
PRPF38A-203ENST00000487160 SOWAHBA6NEL2 793 aa9.48□□□□□ -0.89
PRPF38A-203ENST00000487160 ABL2P42684 1182 aa9.48□□□□□ -0.89
PRPF38A-203ENST00000487160 BCAMP50895 628 aa9.48□□□□□ -0.89
PRPF38A-203ENST00000487160 CCDC82Q8N4S0 544 aa9.48□□□□□ -0.89
PRPF38A-203ENST00000487160 GJD4Q96KN9 370 aaPredicted RBP9.48□□□□□ -0.89
PRPF38A-203ENST00000487160 PRM3Q9NNZ6 103 aa9.48□□□□□ -0.89
PRPF38A-203ENST00000487160 HPS5Q9UPZ3 1129 aa9.48□□□□□ -0.89
PRPF38A-203ENST00000487160 ZNF330Q9Y3S2 320 aaPredicted RBP9.48□□□□□ -0.89
PRPF38A-203ENST00000487160 PRR7Q8TB68 274 aa9.47□□□□□ -0.89
PRPF38A-203ENST00000487160 LRRN4Q8WUT4 740 aa9.47□□□□□ -0.89
PRPF38A-203ENST00000487160 WNT2BQ93097 391 aa9.47□□□□□ -0.89
PRPF38A-203ENST00000487160 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
PRPF38A-203ENST00000487160 PRR14Q9BWN1 585 aa9.46□□□□□ -0.9
PRPF38A-203ENST00000487160 APLP1P51693 650 aa9.45□□□□□ -0.9
PRPF38A-203ENST00000487160 TSR3Q9UJK0 312 aaKnown RBP9.45□□□□□ -0.9
PRPF38A-203ENST00000487160 Q3C1V9 767 aa9.44□□□□□ -0.9
PRPF38A-203ENST00000487160 RETREG3Q86VR2 466 aa9.44□□□□□ -0.9
PRPF38A-203ENST00000487160 TRIM34Q9BYJ4 488 aa9.44□□□□□ -0.9
PRPF38A-203ENST00000487160 BLOC1S3Q6QNY0 202 aa9.43□□□□□ -0.9
PRPF38A-203ENST00000487160 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
PRPF38A-203ENST00000487160 WWC1Q8IX03 1113 aa9.43□□□□□ -0.9
PRPF38A-203ENST00000487160 NDUFB9Q9Y6M9 179 aa9.43□□□□□ -0.9
PRPF38A-203ENST00000487160 PER1O15534 1290 aaPredicted RBP9.42□□□□□ -0.9
PRPF38A-203ENST00000487160 SCUBE3Q8IX30 993 aa9.42□□□□□ -0.9
PRPF38A-203ENST00000487160 PLSCR2Q9NRY7 297 aa9.42□□□□□ -0.9
PRPF38A-203ENST00000487160 EPS8L1Q8TE68 723 aa9.41□□□□□ -0.9
PRPF38A-203ENST00000487160 KRTAP3-3Q9BYR6 98 aa9.41□□□□□ -0.9
PRPF38A-203ENST00000487160 KRTAP3-2Q9BYR7 98 aa9.41□□□□□ -0.9
PRPF38A-203ENST00000487160 PCDHB3Q9Y5E6 796 aa9.41□□□□□ -0.9
PRPF38A-203ENST00000487160 POM121CA8CG34 1229 aa9.4□□□□□ -0.9
PRPF38A-203ENST00000487160 IRF5Q13568 498 aa9.4□□□□□ -0.9
PRPF38A-203ENST00000487160 BRICD5Q6PL45 260 aa9.4□□□□□ -0.9
PRPF38A-203ENST00000487160 WBP1LQ9NX94 342 aa9.4□□□□□ -0.9
PRPF38A-203ENST00000487160 NR6A1Q15406 480 aa9.39□□□□□ -0.91
PRPF38A-203ENST00000487160 CCDC97Q96F63 343 aaPredicted RBP9.39□□□□□ -0.91
PRPF38A-203ENST00000487160 USB1Q9BQ65 265 aaKnown RBP9.39□□□□□ -0.91
PRPF38A-203ENST00000487160 SERPINA10Q9UK55 444 aa9.39□□□□□ -0.91
PRPF38A-203ENST00000487160 SALL2Q9Y467 1007 aaPredicted RBP9.39□□□□□ -0.91
PRPF38A-203ENST00000487160 GPR37L1O60883 481 aa9.38□□□□□ -0.91
PRPF38A-203ENST00000487160 NR1I2O75469 434 aa9.38□□□□□ -0.91
PRPF38A-203ENST00000487160 DESI1Q6ICB0 168 aa9.38□□□□□ -0.91
PRPF38A-203ENST00000487160 LYPD8Q6UX82 237 aa9.37□□□□□ -0.91
PRPF38A-203ENST00000487160 THAP11Q96EK4 314 aa9.37□□□□□ -0.91
PRPF38A-203ENST00000487160 FMNL1O95466 1100 aaPredicted RBP9.36□□□□□ -0.91
PRPF38A-203ENST00000487160 THSD4Q6ZMP0 1018 aa9.36□□□□□ -0.91
PRPF38A-203ENST00000487160 CALR3Q96L12 384 aaKnown RBP9.36□□□□□ -0.91
PRPF38A-203ENST00000487160 GLMNQ92990 594 aa9.35□□□□□ -0.91
PRPF38A-203ENST00000487160 KCTD12Q96CX2 325 aaKnown RBP9.35□□□□□ -0.91
PRPF38A-203ENST00000487160 VAC14Q08AM6 782 aa9.34□□□□□ -0.91
PRPF38A-203ENST00000487160 WASHC4Q2M389 1173 aa9.34□□□□□ -0.91
PRPF38A-203ENST00000487160 COPS2P61201 443 aa9.33□□□□□ -0.92
PRPF38A-203ENST00000487160 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
PRPF38A-203ENST00000487160 JUNDP17535 347 aa9.31□□□□□ -0.92
PRPF38A-203ENST00000487160 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
PRPF38A-203ENST00000487160 SPSB2Q99619 263 aa9.31□□□□□ -0.92
PRPF38A-203ENST00000487160 FAM160A2Q8N612 972 aaPredicted RBP9.3□□□□□ -0.92
PRPF38A-203ENST00000487160 POTEMA6NI47 508 aa9.29□□□□□ -0.92
PRPF38A-203ENST00000487160 F12P00748 615 aaPredicted RBP9.28□□□□□ -0.92
PRPF38A-203ENST00000487160 PTPRNQ16849 979 aa9.28□□□□□ -0.92
PRPF38A-203ENST00000487160 MSS51Q4VC12 460 aa9.28□□□□□ -0.92
PRPF38A-203ENST00000487160 MAP10Q9P2G4 905 aa9.28□□□□□ -0.92
PRPF38A-203ENST00000487160 PTPN5P54829 565 aa9.27□□□□□ -0.93
PRPF38A-203ENST00000487160 CDAN1Q8IWY9 1227 aa9.27□□□□□ -0.93
PRPF38A-203ENST00000487160 PNMA1Q8ND90 353 aa9.27□□□□□ -0.93
PRPF38A-203ENST00000487160 TLL1O43897 1013 aa9.26□□□□□ -0.93
PRPF38A-203ENST00000487160 ZPR1O75312 459 aa9.26□□□□□ -0.93
PRPF38A-203ENST00000487160 DXOO77932 396 aaKnown RBP9.26□□□□□ -0.93
PRPF38A-203ENST00000487160 CTHP32929 405 aa9.26□□□□□ -0.93
PRPF38A-203ENST00000487160 NYAP1Q6ZVC0 841 aa9.26□□□□□ -0.93
PRPF38A-203ENST00000487160 MTRQ99707 1265 aa9.26□□□□□ -0.93
PRPF38A-203ENST00000487160 ALG2Q9H553 416 aa9.26□□□□□ -0.93
PRPF38A-203ENST00000487160 PRDM9Q9NQV7 894 aa9.26□□□□□ -0.93
PRPF38A-203ENST00000487160 POTEGQ6S5H5 508 aa9.25□□□□□ -0.93
PRPF38A-203ENST00000487160 FKBPLQ9UIM3 349 aa9.25□□□□□ -0.93
PRPF38A-203ENST00000487160 CCNYL3P0C7X3 344 aa9.24□□□□□ -0.93
PRPF38A-203ENST00000487160 MMP16P51512 607 aa9.24□□□□□ -0.93
PRPF38A-203ENST00000487160 NUDT12Q9BQG2 462 aa9.24□□□□□ -0.93
PRPF38A-203ENST00000487160 EVA1BQ9NVM1 165 aa9.24□□□□□ -0.93
PRPF38A-203ENST00000487160 ADH1BP00325 375 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms