RNA–Protein interactions for RNA: ENST00000486855.1

PHTF1-211, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 3

Gene PHTF1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-211ENST00000486855 EYA1Q99502 592 aa9.49□□□□□ -0.89
PHTF1-211ENST00000486855 PTPRGP23470 1445 aa9.48□□□□□ -0.89
PHTF1-211ENST00000486855 CARMIL2Q6F5E8 1435 aa9.48□□□□□ -0.89
PHTF1-211ENST00000486855 KDM6BO15054 1643 aa9.48□□□□□ -0.89
PHTF1-211ENST00000486855 KIF21BO75037 1637 aa9.47□□□□□ -0.89
PHTF1-211ENST00000486855 ZPR1O75312 459 aa9.47□□□□□ -0.89
PHTF1-211ENST00000486855 ZNF787Q6DD87 383 aa9.47□□□□□ -0.89
PHTF1-211ENST00000486855 UACAQ9BZF9 1416 aa9.47□□□□□ -0.89
PHTF1-211ENST00000486855 CFAP43Q8NDM7 1665 aa9.45□□□□□ -0.9
PHTF1-211ENST00000486855 SLF2Q8IX21 1173 aa9.45□□□□□ -0.9
PHTF1-211ENST00000486855 ZNF775Q96BV0 537 aaPredicted RBP9.45□□□□□ -0.9
PHTF1-211ENST00000486855 TMUB1Q9BVT8 246 aa9.45□□□□□ -0.9
PHTF1-211ENST00000486855 ASXL2Q76L83 1435 aa9.45□□□□□ -0.9
PHTF1-211ENST00000486855 PLB1Q6P1J6 1458 aa9.45□□□□□ -0.9
PHTF1-211ENST00000486855 RNF223E7ERA6 249 aa9.44□□□□□ -0.9
PHTF1-211ENST00000486855 SPRYD3Q8NCJ5 442 aa9.44□□□□□ -0.9
PHTF1-211ENST00000486855 LRRIQ1Q96JM4 1722 aa9.44□□□□□ -0.9
PHTF1-211ENST00000486855 EPRSP07814 1512 aaKnown RBP9.43□□□□□ -0.9
PHTF1-211ENST00000486855 GOLGA3Q08378 1498 aa9.43□□□□□ -0.9
PHTF1-211ENST00000486855 TLL1O43897 1013 aa9.43□□□□□ -0.9
PHTF1-211ENST00000486855 HDGFP51858 240 aaKnown RBP9.43□□□□□ -0.9
PHTF1-211ENST00000486855 BLOC1S3Q6QNY0 202 aa9.43□□□□□ -0.9
PHTF1-211ENST00000486855 RAPGEF6Q8TEU7 1601 aa9.42□□□□□ -0.9
PHTF1-211ENST00000486855 GGCXP38435 758 aa9.41□□□□□ -0.9
PHTF1-211ENST00000486855 NECTIN2Q92692 538 aa9.41□□□□□ -0.9
PHTF1-211ENST00000486855 FAM69CQ0P6D2 419 aa9.4□□□□□ -0.9
PHTF1-211ENST00000486855 PCDHB3Q9Y5E6 796 aa9.4□□□□□ -0.9
PHTF1-211ENST00000486855 EEA1Q15075 1411 aa9.39□□□□□ -0.91
PHTF1-211ENST00000486855 SLC19A1P41440 591 aa9.39□□□□□ -0.91
PHTF1-211ENST00000486855 MYT1Q01538 1121 aa9.39□□□□□ -0.91
PHTF1-211ENST00000486855 WDR7Q9Y4E6 1490 aa9.39□□□□□ -0.91
PHTF1-211ENST00000486855 ABCA9Q8IUA7 1624 aa9.38□□□□□ -0.91
PHTF1-211ENST00000486855 POTECB2RU33 542 aa9.38□□□□□ -0.91
PHTF1-211ENST00000486855 MLLT3P42568 568 aaPredicted RBP9.38□□□□□ -0.91
PHTF1-211ENST00000486855 COL17A1Q9UMD9 1497 aaPredicted RBP9.38□□□□□ -0.91
PHTF1-211ENST00000486855 TTBK1Q5TCY1 1321 aaPredicted RBP9.37□□□□□ -0.91
PHTF1-211ENST00000486855 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
PHTF1-211ENST00000486855 SPRYD7Q5W111 196 aa9.37□□□□□ -0.91
PHTF1-211ENST00000486855 LIAT1Q6ZQX7 453 aa9.37□□□□□ -0.91
PHTF1-211ENST00000486855 WDR70Q9NW82 654 aa9.37□□□□□ -0.91
PHTF1-211ENST00000486855 EFCAB5A4FU69 1503 aa9.36□□□□□ -0.91
PHTF1-211ENST00000486855 PRR20EP86478 221 aa9.35□□□□□ -0.91
PHTF1-211ENST00000486855 PRR20CP86479 221 aa9.35□□□□□ -0.91
PHTF1-211ENST00000486855 PRR20DP86480 221 aa9.35□□□□□ -0.91
PHTF1-211ENST00000486855 PRR20BP86481 221 aa9.35□□□□□ -0.91
PHTF1-211ENST00000486855 PRR20AP86496 221 aa9.35□□□□□ -0.91
PHTF1-211ENST00000486855 ATP10BO94823 1461 aa9.34□□□□□ -0.91
PHTF1-211ENST00000486855 NUP153P49790 1475 aaKnown RBP9.34□□□□□ -0.91
PHTF1-211ENST00000486855 S1PR4O95977 384 aa9.34□□□□□ -0.91
PHTF1-211ENST00000486855 PTGDRQ13258 359 aa9.34□□□□□ -0.91
PHTF1-211ENST00000486855 ZNF598Q86UK7 904 aaKnown RBP9.34□□□□□ -0.91
PHTF1-211ENST00000486855 ANKLE1Q8NAG6 615 aa9.34□□□□□ -0.91
PHTF1-211ENST00000486855 PRR14Q9BWN1 585 aa9.34□□□□□ -0.91
PHTF1-211ENST00000486855 TMEM134Q9H6X4 195 aa9.34□□□□□ -0.91
PHTF1-211ENST00000486855 MAGI3Q5TCQ9 1506 aa9.33□□□□□ -0.92
PHTF1-211ENST00000486855 GDF9O60383 454 aa9.33□□□□□ -0.92
PHTF1-211ENST00000486855 PLA2G2CQ5R387 149 aa9.33□□□□□ -0.92
PHTF1-211ENST00000486855 PAXIP1Q6ZW49 1069 aaPredicted RBP9.33□□□□□ -0.92
PHTF1-211ENST00000486855 ADGRG1Q9Y653 693 aa9.33□□□□□ -0.92
PHTF1-211ENST00000486855 FRMPD1Q5SYB0 1578 aa9.33□□□□□ -0.92
PHTF1-211ENST00000486855 RICTORQ6R327 1708 aa9.32□□□□□ -0.92
PHTF1-211ENST00000486855 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
PHTF1-211ENST00000486855 DGAT1O75907 488 aa9.32□□□□□ -0.92
PHTF1-211ENST00000486855 DNAJB2P25686 324 aa9.32□□□□□ -0.92
PHTF1-211ENST00000486855 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
PHTF1-211ENST00000486855 FHOD3Q2V2M9 1422 aa9.31□□□□□ -0.92
PHTF1-211ENST00000486855 SLC10A3P09131 477 aa9.31□□□□□ -0.92
PHTF1-211ENST00000486855 FAM161AQ3B820 660 aa9.31□□□□□ -0.92
PHTF1-211ENST00000486855 TEX14Q8IWB6 1497 aa9.31□□□□□ -0.92
PHTF1-211ENST00000486855 TTC37Q6PGP7 1564 aa9.3□□□□□ -0.92
PHTF1-211ENST00000486855 PKDCCQ504Y2 493 aa9.3□□□□□ -0.92
PHTF1-211ENST00000486855 ZNF697Q5TEC3 545 aa9.3□□□□□ -0.92
PHTF1-211ENST00000486855 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.3□□□□□ -0.92
PHTF1-211ENST00000486855 SIGLEC1Q9BZZ2 1709 aa9.29□□□□□ -0.92
PHTF1-211ENST00000486855 CFHP08603 1231 aa9.29□□□□□ -0.92
PHTF1-211ENST00000486855 LCE2AQ5TA79 106 aaPredicted RBP9.29□□□□□ -0.92
PHTF1-211ENST00000486855 RCCD1A6NED2 376 aa9.28□□□□□ -0.92
PHTF1-211ENST00000486855 TNFRSF10AO00220 468 aa9.28□□□□□ -0.92
PHTF1-211ENST00000486855 SLC4A3P48751 1232 aa9.28□□□□□ -0.92
PHTF1-211ENST00000486855 MYO5CQ9NQX4 1742 aa9.28□□□□□ -0.92
PHTF1-211ENST00000486855 ARHGAP35Q9NRY4 1499 aa9.28□□□□□ -0.92
PHTF1-211ENST00000486855 ADH1BP00325 375 aa9.27□□□□□ -0.93
PHTF1-211ENST00000486855 P3H3Q8IVL6 736 aa9.27□□□□□ -0.93
PHTF1-211ENST00000486855 HECW1Q76N89 1606 aa9.27□□□□□ -0.93
PHTF1-211ENST00000486855 CDK13Q14004 1512 aaKnown RBP9.26□□□□□ -0.93
PHTF1-211ENST00000486855 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.26□□□□□ -0.93
PHTF1-211ENST00000486855 ARAP3Q8WWN8 1544 aa9.26□□□□□ -0.93
PHTF1-211ENST00000486855 CD109Q6YHK3 1445 aa9.26□□□□□ -0.93
PHTF1-211ENST00000486855 FAM187AA6NFU0 413 aa9.26□□□□□ -0.93
PHTF1-211ENST00000486855 ST8SIA5O15466 376 aa9.26□□□□□ -0.93
PHTF1-211ENST00000486855 RBM46Q8TBY0 533 aaKnown RBP9.26□□□□□ -0.93
PHTF1-211ENST00000486855 KIF14Q15058 1648 aa9.26□□□□□ -0.93
PHTF1-211ENST00000486855 CDC42BPBQ9Y5S2 1711 aa9.25□□□□□ -0.93
PHTF1-211ENST00000486855 KMT5BQ4FZB7 885 aa9.25□□□□□ -0.93
PHTF1-211ENST00000486855 FAM9AQ8IZU1 332 aaPredicted RBP9.25□□□□□ -0.93
PHTF1-211ENST00000486855 KCNV2Q8TDN2 545 aa9.25□□□□□ -0.93
PHTF1-211ENST00000486855 PKD2L1Q9P0L9 805 aa9.25□□□□□ -0.93
PHTF1-211ENST00000486855 ADGRL1O94910 1474 aa9.25□□□□□ -0.93
PHTF1-211ENST00000486855 PCF11O94913 1555 aaKnown RBP9.24□□□□□ -0.93
PHTF1-211ENST00000486855 CFAP74Q9C0B2 1584 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms