RNA–Protein interactions for RNA: ENST00000486690.6

LDHA-210, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-210ENST00000486690 SPHKAPQ2M3C7 1700 aa11.22□□□□□ -0.61
LDHA-210ENST00000486690 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.22□□□□□ -0.61
LDHA-210ENST00000486690 NRXN3Q9Y4C0 1643 aa11.22□□□□□ -0.61
LDHA-210ENST00000486690 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
LDHA-210ENST00000486690 BCANQ96GW7 911 aa11.21□□□□□ -0.61
LDHA-210ENST00000486690 PHLPP1O60346 1717 aa11.21□□□□□ -0.62
LDHA-210ENST00000486690 COL16A1Q07092 1604 aaPredicted RBP11.2□□□□□ -0.62
LDHA-210ENST00000486690 PTPRUQ92729 1446 aa11.2□□□□□ -0.62
LDHA-210ENST00000486690 PPP1R15AO75807 674 aaPredicted RBP11.2□□□□□ -0.62
LDHA-210ENST00000486690 NUBP1P53384 320 aa11.2□□□□□ -0.62
LDHA-210ENST00000486690 SETBP1Q9Y6X0 1596 aa11.2□□□□□ -0.62
LDHA-210ENST00000486690 RRBP1Q9P2E9 1410 aaKnown RBP11.19□□□□□ -0.62
LDHA-210ENST00000486690 GABBR2O75899 941 aa11.19□□□□□ -0.62
LDHA-210ENST00000486690 CHGAP10645 457 aaKnown RBP11.19□□□□□ -0.62
LDHA-210ENST00000486690 NUTM2DQ5VT03 806 aaPredicted RBP11.19□□□□□ -0.62
LDHA-210ENST00000486690 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
LDHA-210ENST00000486690 C19orf44Q9H6X5 657 aa11.19□□□□□ -0.62
LDHA-210ENST00000486690 TRPM2O94759 1503 aa11.19□□□□□ -0.62
LDHA-210ENST00000486690 XRN1Q8IZH2 1706 aaKnown RBP11.18□□□□□ -0.62
LDHA-210ENST00000486690 ITGAEP38570 1179 aa11.18□□□□□ -0.62
LDHA-210ENST00000486690 POTEAQ6S8J7 498 aa11.18□□□□□ -0.62
LDHA-210ENST00000486690 PPARGC1BQ86YN6 1023 aaKnown RBP11.18□□□□□ -0.62
LDHA-210ENST00000486690 AMOTL2Q9Y2J4 779 aa11.18□□□□□ -0.62
LDHA-210ENST00000486690 NAIPQ13075 1403 aa11.18□□□□□ -0.62
LDHA-210ENST00000486690 AHDC1Q5TGY3 1603 aaPredicted RBP11.17□□□□□ -0.62
LDHA-210ENST00000486690 JCADQ9P266 1359 aa11.16□□□□□ -0.62
LDHA-210ENST00000486690 CLTCL1P53675 1640 aa11.16□□□□□ -0.62
LDHA-210ENST00000486690 NEXMIFQ5QGS0 1516 aa11.15□□□□□ -0.62
LDHA-210ENST00000486690 KIF1BO60333 1816 aa11.15□□□□□ -0.62
LDHA-210ENST00000486690 CADPS2Q86UW7 1296 aa11.15□□□□□ -0.62
LDHA-210ENST00000486690 RASEFQ8IZ41 740 aa11.15□□□□□ -0.62
LDHA-210ENST00000486690 ZRANB1Q9UGI0 708 aa11.15□□□□□ -0.62
LDHA-210ENST00000486690 DCCP43146 1447 aa11.15□□□□□ -0.62
LDHA-210ENST00000486690 SHPRHQ149N8 1683 aa11.14□□□□□ -0.63
LDHA-210ENST00000486690 METP08581 1390 aa11.14□□□□□ -0.63
LDHA-210ENST00000486690 SETD1AO15047 1707 aaKnown RBP11.13□□□□□ -0.63
LDHA-210ENST00000486690 TSPYL2Q9H2G4 693 aaPredicted RBP11.13□□□□□ -0.63
LDHA-210ENST00000486690 LRP6O75581 1613 aa11.13□□□□□ -0.63
LDHA-210ENST00000486690 ATF3P18847 181 aa11.12□□□□□ -0.63
LDHA-210ENST00000486690 BRINP3Q76B58 766 aa11.12□□□□□ -0.63
LDHA-210ENST00000486690 FAM212AQ96EL1 285 aa11.12□□□□□ -0.63
LDHA-210ENST00000486690 NHSL1Q5SYE7 1610 aa11.12□□□□□ -0.63
LDHA-210ENST00000486690 SPATA31A6Q5VVP1 1343 aa11.11□□□□□ -0.63
LDHA-210ENST00000486690 MST1RQ04912 1400 aa11.11□□□□□ -0.63
LDHA-210ENST00000486690 HFM1A2PYH4 1435 aa11.1□□□□□ -0.63
LDHA-210ENST00000486690 NALCNQ8IZF0 1738 aa11.1□□□□□ -0.63
LDHA-210ENST00000486690 DCAF8Q5TAQ9 597 aa11.1□□□□□ -0.63
LDHA-210ENST00000486690 C14orf37Q86TY3 774 aa11.1□□□□□ -0.63
LDHA-210ENST00000486690 PRAG1Q86YV5 1406 aa11.09□□□□□ -0.63
LDHA-210ENST00000486690 SETD5Q9C0A6 1442 aa11.09□□□□□ -0.63
LDHA-210ENST00000486690 CLCN6P51797 869 aa11.09□□□□□ -0.63
LDHA-210ENST00000486690 GSE1Q14687 1217 aa11.09□□□□□ -0.63
LDHA-210ENST00000486690 ZNF326Q5BKZ1 582 aaKnown RBP11.09□□□□□ -0.63
LDHA-210ENST00000486690 ZNF579Q8NAF0 562 aaKnown RBP11.09□□□□□ -0.63
LDHA-210ENST00000486690 LAMC1P11047 1609 aa11.09□□□□□ -0.63
LDHA-210ENST00000486690 ASXL1Q8IXJ9 1541 aa11.09□□□□□ -0.63
LDHA-210ENST00000486690 ADGRL3Q9HAR2 1447 aa11.09□□□□□ -0.63
LDHA-210ENST00000486690 PPLO60437 1756 aa11.08□□□□□ -0.64
LDHA-210ENST00000486690 PLCB2Q00722 1185 aa11.08□□□□□ -0.64
LDHA-210ENST00000486690 CCDC61Q9Y6R9 512 aa11.07□□□□□ -0.64
LDHA-210ENST00000486690 RPGRIP1LQ68CZ1 1315 aa11.07□□□□□ -0.64
LDHA-210ENST00000486690 VGFO15240 615 aaPredicted RBP11.06□□□□□ -0.64
LDHA-210ENST00000486690 PTCH1Q13635 1447 aa11.06□□□□□ -0.64
LDHA-210ENST00000486690 ROBO2Q9HCK4 1378 aa11.04□□□□□ -0.64
LDHA-210ENST00000486690 ZNF772Q68DY9 489 aaPredicted RBP11.04□□□□□ -0.64
LDHA-210ENST00000486690 LRRC59Q96AG4 307 aaKnown RBP11.04□□□□□ -0.64
LDHA-210ENST00000486690 IFT172Q9UG01 1749 aa11.04□□□□□ -0.64
LDHA-210ENST00000486690 C1orf167Q5SNV9 1468 aa11.03□□□□□ -0.64
LDHA-210ENST00000486690 DDX17Q92841 729 aaKnown RBP11.02□□□□□ -0.65
LDHA-210ENST00000486690 TRIM52Q96A61 297 aa11.02□□□□□ -0.65
LDHA-210ENST00000486690 SOS2Q07890 1332 aaPredicted RBP11.02□□□□□ -0.65
LDHA-210ENST00000486690 PNPLA6Q8IY17 1366 aa11.02□□□□□ -0.65
LDHA-210ENST00000486690 SPATA31E1Q6ZUB1 1445 aa11.01□□□□□ -0.65
LDHA-210ENST00000486690 CDK12Q9NYV4 1490 aaPredicted RBP11.01□□□□□ -0.65
LDHA-210ENST00000486690 CIZ1Q9ULV3 898 aaPredicted RBP11.01□□□□□ -0.65
LDHA-210ENST00000486690 ORAI2Q96SN7 254 aa11□□□□□ -0.65
LDHA-210ENST00000486690 MEX3CQ5U5Q3 659 aaKnown RBP10.99□□□□□ -0.65
LDHA-210ENST00000486690 UPF1Q92900 1129 aaKnown RBP eCLIP10.99□□□□□ -0.65
LDHA-210ENST00000486690 PHF12Q96QT6 1004 aa10.99□□□□□ -0.65
LDHA-210ENST00000486690 ADGRF5Q8IZF2 1346 aa10.99□□□□□ -0.65
LDHA-210ENST00000486690 TECPR2O15040 1411 aa10.99□□□□□ -0.65
LDHA-210ENST00000486690 NUTM2BA6NNL0 878 aaPredicted RBP10.98□□□□□ -0.65
LDHA-210ENST00000486690 NUTM2EB1AL46 878 aaPredicted RBP10.98□□□□□ -0.65
LDHA-210ENST00000486690 RXRBP28702 533 aa10.98□□□□□ -0.65
LDHA-210ENST00000486690 NUTM2AQ8IVF1 878 aaPredicted RBP10.98□□□□□ -0.65
LDHA-210ENST00000486690 MPHOSPH9Q99550 1183 aa10.98□□□□□ -0.65
LDHA-210ENST00000486690 AFF2P51816 1311 aa10.98□□□□□ -0.65
LDHA-210ENST00000486690 CDC42BPGQ6DT37 1551 aa10.98□□□□□ -0.65
LDHA-210ENST00000486690 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
LDHA-210ENST00000486690 KIF12Q96FN5 646 aa10.97□□□□□ -0.65
LDHA-210ENST00000486690 ABCC11Q96J66 1382 aa10.97□□□□□ -0.65
LDHA-210ENST00000486690 KNDC1Q76NI1 1749 aa10.97□□□□□ -0.65
LDHA-210ENST00000486690 CCDC144AA2RUR9 1427 aa10.96□□□□□ -0.65
LDHA-210ENST00000486690 ANKRD30BQ9BXX2 1392 aa10.96□□□□□ -0.65
LDHA-210ENST00000486690 PIK3C2GO75747 1445 aa10.95□□□□□ -0.66
LDHA-210ENST00000486690 POTEIP0CG38 1075 aa10.95□□□□□ -0.66
LDHA-210ENST00000486690 CHRM1P11229 460 aaPredicted RBP10.95□□□□□ -0.66
LDHA-210ENST00000486690 SGIP1Q9BQI5 828 aa10.95□□□□□ -0.66
LDHA-210ENST00000486690 PXDNQ92626 1479 aa10.94□□□□□ -0.66
LDHA-210ENST00000486690 LRPPRCP42704 1394 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms