RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 YEATS2Q9ULM3 1422 aa10.17□□□□□ -0.78
TMC1-204ENST00000486417 NLRP6P59044 892 aa10.16□□□□□ -0.78
TMC1-204ENST00000486417 UGGT1Q9NYU2 1555 aa10.15□□□□□ -0.78
TMC1-204ENST00000486417 SOX12O15370 315 aa10.15□□□□□ -0.78
TMC1-204ENST00000486417 MS4A3Q96HJ5 214 aa10.15□□□□□ -0.78
TMC1-204ENST00000486417 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
TMC1-204ENST00000486417 ARHGEF40Q8TER5 1519 aa10.15□□□□□ -0.78
TMC1-204ENST00000486417 USP47Q96K76 1375 aa10.15□□□□□ -0.78
TMC1-204ENST00000486417 SIGLEC1Q9BZZ2 1709 aa10.15□□□□□ -0.79
TMC1-204ENST00000486417 DDX10Q13206 875 aaKnown RBP10.14□□□□□ -0.79
TMC1-204ENST00000486417 ZNF326Q5BKZ1 582 aaKnown RBP10.14□□□□□ -0.79
TMC1-204ENST00000486417 ADGRB3O60242 1522 aa10.14□□□□□ -0.79
TMC1-204ENST00000486417 DCAF11Q8TEB1 546 aa10.13□□□□□ -0.79
TMC1-204ENST00000486417 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
TMC1-204ENST00000486417 KIAA1210Q9ULL0 1709 aa10.12□□□□□ -0.79
TMC1-204ENST00000486417 PIK3C2BO00750 1634 aa10.12□□□□□ -0.79
TMC1-204ENST00000486417 NPATQ14207 1427 aa10.12□□□□□ -0.79
TMC1-204ENST00000486417 WASHC2AQ641Q2 1341 aa10.12□□□□□ -0.79
TMC1-204ENST00000486417 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
TMC1-204ENST00000486417 IQGAP1P46940 1657 aa10.12□□□□□ -0.79
TMC1-204ENST00000486417 GPRASP1Q5JY77 1395 aa10.12□□□□□ -0.79
TMC1-204ENST00000486417 CCDC7Q96M83 1385 aa10.12□□□□□ -0.79
TMC1-204ENST00000486417 AGLP35573 1532 aa10.11□□□□□ -0.79
TMC1-204ENST00000486417 SYNMO15061 1565 aa10.11□□□□□ -0.79
TMC1-204ENST00000486417 C19orf67A6NJJ6 358 aa10.11□□□□□ -0.79
TMC1-204ENST00000486417 RGL3Q3MIN7 710 aa10.11□□□□□ -0.79
TMC1-204ENST00000486417 CNTLNQ9NXG0 1405 aa10.11□□□□□ -0.79
TMC1-204ENST00000486417 PREX1Q8TCU6 1659 aa10.11□□□□□ -0.79
TMC1-204ENST00000486417 MYOM2P54296 1465 aa10.1□□□□□ -0.79
TMC1-204ENST00000486417 ROCK2O75116 1388 aaKnown RBP10.1□□□□□ -0.79
TMC1-204ENST00000486417 PPLO60437 1756 aa10.1□□□□□ -0.79
TMC1-204ENST00000486417 CFAP65Q6ZU64 1925 aaKnown RBP10.09□□□□□ -0.79
TMC1-204ENST00000486417 NOS1P29475 1434 aa10.08□□□□□ -0.8
TMC1-204ENST00000486417 ARHGAP31Q2M1Z3 1444 aa10.08□□□□□ -0.8
TMC1-204ENST00000486417 GGT6Q6P531 493 aa10.08□□□□□ -0.8
TMC1-204ENST00000486417 CARD11Q9BXL7 1154 aa10.08□□□□□ -0.8
TMC1-204ENST00000486417 COL17A1Q9UMD9 1497 aaPredicted RBP10.08□□□□□ -0.8
TMC1-204ENST00000486417 CLTCQ00610 1675 aaKnown RBP10.08□□□□□ -0.8
TMC1-204ENST00000486417 C11orf95C9JLR9 678 aaPredicted RBP10.07□□□□□ -0.8
TMC1-204ENST00000486417 KIF7Q2M1P5 1343 aa10.07□□□□□ -0.8
TMC1-204ENST00000486417 WASHC2CQ9Y4E1 1318 aa10.06□□□□□ -0.8
TMC1-204ENST00000486417 NRXN1Q9ULB1 1477 aa10.06□□□□□ -0.8
TMC1-204ENST00000486417 HOMEZQ8IX15 550 aa10.06□□□□□ -0.8
TMC1-204ENST00000486417 CENPBP07199 599 aaPredicted RBP10.05□□□□□ -0.8
TMC1-204ENST00000486417 TMEM132AQ24JP5 1023 aa10.05□□□□□ -0.8
TMC1-204ENST00000486417 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.05□□□□□ -0.8
TMC1-204ENST00000486417 YTHDC1Q96MU7 727 aaKnown RBP10.05□□□□□ -0.8
TMC1-204ENST00000486417 MYO5BQ9ULV0 1848 aa10.05□□□□□ -0.8
TMC1-204ENST00000486417 ANP32CO43423 234 aa10.04□□□□□ -0.8
TMC1-204ENST00000486417 E2F4Q16254 413 aa10.04□□□□□ -0.8
TMC1-204ENST00000486417 STAC3Q96MF2 364 aa10.04□□□□□ -0.8
TMC1-204ENST00000486417 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
TMC1-204ENST00000486417 ARID4BQ4LE39 1312 aaPredicted RBP10.04□□□□□ -0.8
TMC1-204ENST00000486417 TTLL13PA6NNM8 815 aa10.03□□□□□ -0.8
TMC1-204ENST00000486417 NBPF1Q3BBV0 1214 aa10.03□□□□□ -0.8
TMC1-204ENST00000486417 NEXMIFQ5QGS0 1516 aa10.03□□□□□ -0.8
TMC1-204ENST00000486417 SEMA3EO15041 775 aa10.02□□□□□ -0.8
TMC1-204ENST00000486417 GALR2O43603 387 aaPredicted RBP10.02□□□□□ -0.8
TMC1-204ENST00000486417 EVX2Q03828 476 aa10.02□□□□□ -0.8
TMC1-204ENST00000486417 LMOD2Q6P5Q4 547 aa10.02□□□□□ -0.8
TMC1-204ENST00000486417 SETBP1Q9Y6X0 1596 aa10.02□□□□□ -0.8
TMC1-204ENST00000486417 TMEM131LA2VDJ0 1609 aa10.02□□□□□ -0.8
TMC1-204ENST00000486417 MYO3AQ8NEV4 1616 aa10.02□□□□□ -0.8
TMC1-204ENST00000486417 SPATA31D1Q6ZQQ2 1576 aa10.02□□□□□ -0.81
TMC1-204ENST00000486417 ERVK-7P63135 1459 aa10.02□□□□□ -0.81
TMC1-204ENST00000486417 ST20-MTHFSA0A0A6YYL1 179 aa10.02□□□□□ -0.81
TMC1-204ENST00000486417 GOLGA2Q08379 1002 aa10.02□□□□□ -0.81
TMC1-204ENST00000486417 BMP2KQ9NSY1 1161 aaPredicted RBP10.02□□□□□ -0.81
TMC1-204ENST00000486417 SCAF11Q99590 1463 aaKnown RBP10.01□□□□□ -0.81
TMC1-204ENST00000486417 CCER2I3L3R5 266 aa10.01□□□□□ -0.81
TMC1-204ENST00000486417 ARHGEF1Q92888 912 aaKnown RBP10.01□□□□□ -0.81
TMC1-204ENST00000486417 CRISPLD2Q9H0B8 497 aa10.01□□□□□ -0.81
TMC1-204ENST00000486417 MKRN3Q13064 507 aaKnown RBP10□□□□□ -0.81
TMC1-204ENST00000486417 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
TMC1-204ENST00000486417 ADGRF5Q8IZF2 1346 aa9.98□□□□□ -0.81
TMC1-204ENST00000486417 MFSD10Q14728 455 aa9.98□□□□□ -0.81
TMC1-204ENST00000486417 DPY19L2Q6NUT2 758 aa9.98□□□□□ -0.81
TMC1-204ENST00000486417 C14orf37Q86TY3 774 aa9.98□□□□□ -0.81
TMC1-204ENST00000486417 KDM5AP29375 1690 aaKnown RBP9.98□□□□□ -0.81
TMC1-204ENST00000486417 MYOM1P52179 1685 aa9.98□□□□□ -0.81
TMC1-204ENST00000486417 ADGRB1O14514 1584 aa9.98□□□□□ -0.81
TMC1-204ENST00000486417 ILDR1Q86SU0 546 aaPredicted RBP9.97□□□□□ -0.81
TMC1-204ENST00000486417 EIF3AQ14152 1382 aaKnown RBP9.97□□□□□ -0.81
TMC1-204ENST00000486417 DISP3Q9P2K9 1392 aa9.97□□□□□ -0.81
TMC1-204ENST00000486417 RPGRIP1LQ68CZ1 1315 aa9.97□□□□□ -0.81
TMC1-204ENST00000486417 QRICH2Q9H0J4 1663 aa9.97□□□□□ -0.81
TMC1-204ENST00000486417 TIE1P35590 1138 aa9.97□□□□□ -0.81
TMC1-204ENST00000486417 ARHGEF28Q8N1W1 1705 aaKnown RBP9.96□□□□□ -0.81
TMC1-204ENST00000486417 PDE4AP27815 886 aa9.96□□□□□ -0.82
TMC1-204ENST00000486417 TESK2Q96S53 571 aa9.96□□□□□ -0.82
TMC1-204ENST00000486417 POLR3GLQ9BT43 218 aa9.96□□□□□ -0.82
TMC1-204ENST00000486417 TRIM35Q9UPQ4 493 aa9.96□□□□□ -0.82
TMC1-204ENST00000486417 DDX27Q96GQ7 796 aaKnown RBP9.95□□□□□ -0.82
TMC1-204ENST00000486417 SLC52A1Q9NWF4 448 aa9.95□□□□□ -0.82
TMC1-204ENST00000486417 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.95□□□□□ -0.82
TMC1-204ENST00000486417 ZFYVE9O95405 1425 aa9.94□□□□□ -0.82
TMC1-204ENST00000486417 TESPA1A2RU30 521 aaPredicted RBP9.94□□□□□ -0.82
TMC1-204ENST00000486417 CFAP70Q5T0N1 1121 aa9.94□□□□□ -0.82
TMC1-204ENST00000486417 PRKRIP1Q9H875 184 aaPredicted RBP9.94□□□□□ -0.82
TMC1-204ENST00000486417 FER1L4A9Z1Z3 1794 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms