RNA–Protein interactions for RNA: ENST00000485835.1

PSMD3-203, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 2,888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-203ENST00000485835 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
PSMD3-203ENST00000485835 ST20-MTHFSA0A0A6YYL1 179 aa13.19□□□□□ -0.3
PSMD3-203ENST00000485835 CCDC66A2RUB6 948 aa13.18□□□□□ -0.3
PSMD3-203ENST00000485835 ANKRD7Q92527 254 aa13.18□□□□□ -0.3
PSMD3-203ENST00000485835 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
PSMD3-203ENST00000485835 DNMT1P26358 1616 aaKnown RBP13.18□□□□□ -0.3
PSMD3-203ENST00000485835 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
PSMD3-203ENST00000485835 BAG4O95429 457 aaKnown RBP13.18□□□□□ -0.3
PSMD3-203ENST00000485835 OGFRQ9NZT2 677 aa13.18□□□□□ -0.3
PSMD3-203ENST00000485835 CAMSAP2Q08AD1 1489 aa13.18□□□□□ -0.3
PSMD3-203ENST00000485835 TULP2O00295 520 aa13.17□□□□□ -0.3
PSMD3-203ENST00000485835 CEP170Q5SW79 1584 aa13.17□□□□□ -0.3
PSMD3-203ENST00000485835 IGSF3O75054 1194 aa13.17□□□□□ -0.3
PSMD3-203ENST00000485835 SSFA2P28290 1259 aa13.17□□□□□ -0.3
PSMD3-203ENST00000485835 RNF216Q9NWF9 866 aaPredicted RBP13.17□□□□□ -0.3
PSMD3-203ENST00000485835 TIGD1Q96MW7 591 aa13.16□□□□□ -0.3
PSMD3-203ENST00000485835 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
PSMD3-203ENST00000485835 COL17A1Q9UMD9 1497 aaPredicted RBP13.16□□□□□ -0.3
PSMD3-203ENST00000485835 U2AF2P26368 475 aaKnown RBP eCLIP13.16□□□□□ -0.3
PSMD3-203ENST00000485835 PIBF1Q8WXW3 757 aa13.16□□□□□ -0.3
PSMD3-203ENST00000485835 PRIM1P49642 420 aaKnown RBP13.15□□□□□ -0.3
PSMD3-203ENST00000485835 COG6Q9Y2V7 657 aa13.15□□□□□ -0.3
PSMD3-203ENST00000485835 CAVIN1Q6NZI2 390 aaKnown RBP13.15□□□□□ -0.3
PSMD3-203ENST00000485835 E9PSI1 815 aa13.14□□□□□ -0.31
PSMD3-203ENST00000485835 SLFN14P0C7P3 912 aa13.14□□□□□ -0.31
PSMD3-203ENST00000485835 CHMP4AQ9BY43 222 aa13.14□□□□□ -0.31
PSMD3-203ENST00000485835 DAPK1P53355 1430 aa13.14□□□□□ -0.31
PSMD3-203ENST00000485835 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
PSMD3-203ENST00000485835 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
PSMD3-203ENST00000485835 TSPYL1Q9H0U9 437 aa13.14□□□□□ -0.31
PSMD3-203ENST00000485835 MMP14P50281 582 aa13.14□□□□□ -0.31
PSMD3-203ENST00000485835 PANK1Q8TE04 598 aa13.14□□□□□ -0.31
PSMD3-203ENST00000485835 PCDHB15Q9Y5E8 787 aa13.14□□□□□ -0.31
PSMD3-203ENST00000485835 AK9Q5TCS8 1911 aa13.14□□□□□ -0.31
PSMD3-203ENST00000485835 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
PSMD3-203ENST00000485835 CC2D1BQ5T0F9 858 aaKnown RBP13.13□□□□□ -0.31
PSMD3-203ENST00000485835 NPC1L1Q9UHC9 1359 aa13.13□□□□□ -0.31
PSMD3-203ENST00000485835 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
PSMD3-203ENST00000485835 LRSAM1Q6UWE0 723 aa13.13□□□□□ -0.31
PSMD3-203ENST00000485835 SPTLC3Q9NUV7 552 aa13.13□□□□□ -0.31
PSMD3-203ENST00000485835 LAMC1P11047 1609 aa13.13□□□□□ -0.31
PSMD3-203ENST00000485835 CAPN2P17655 700 aa13.12□□□□□ -0.31
PSMD3-203ENST00000485835 RWDD1Q9H446 243 aaPredicted RBP13.12□□□□□ -0.31
PSMD3-203ENST00000485835 YY1AP1Q9H869 796 aa13.12□□□□□ -0.31
PSMD3-203ENST00000485835 NOLC1Q14978 699 aaKnown RBP eCLIP13.12□□□□□ -0.31
PSMD3-203ENST00000485835 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
PSMD3-203ENST00000485835 LMBRD1Q9NUN5 540 aa13.12□□□□□ -0.31
PSMD3-203ENST00000485835 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
PSMD3-203ENST00000485835 KIAA0586Q9BVV6 1533 aa13.11□□□□□ -0.31
PSMD3-203ENST00000485835 SPINK5Q9NQ38 1064 aaPredicted RBP13.11□□□□□ -0.31
PSMD3-203ENST00000485835 FAM177BA6PVY3 158 aa13.1□□□□□ -0.31
PSMD3-203ENST00000485835 K7ELQ4 463 aaPredicted RBP13.1□□□□□ -0.31
PSMD3-203ENST00000485835 CTIFO43310 598 aaKnown RBP13.1□□□□□ -0.31
PSMD3-203ENST00000485835 MAPK8IP2Q13387 824 aaPredicted RBP13.1□□□□□ -0.31
PSMD3-203ENST00000485835 CUL7Q14999 1698 aa13.1□□□□□ -0.31
PSMD3-203ENST00000485835 ITSN2Q9NZM3 1697 aa13.1□□□□□ -0.31
PSMD3-203ENST00000485835 PTMAP06454 111 aaKnown RBP13.1□□□□□ -0.31
PSMD3-203ENST00000485835 CALCOCO1Q9P1Z2 691 aa13.1□□□□□ -0.31
PSMD3-203ENST00000485835 MCTP1Q6DN14 999 aa13.08□□□□□ -0.32
PSMD3-203ENST00000485835 ABCC5O15440 1437 aa13.08□□□□□ -0.32
PSMD3-203ENST00000485835 TRIM6-TRIM34B2RNG4 842 aa13.08□□□□□ -0.32
PSMD3-203ENST00000485835 CERS3Q8IU89 383 aa13.08□□□□□ -0.32
PSMD3-203ENST00000485835 KIF2CQ99661 725 aa13.08□□□□□ -0.32
PSMD3-203ENST00000485835 TRIM34Q9BYJ4 488 aa13.08□□□□□ -0.32
PSMD3-203ENST00000485835 DIAPH3Q9NSV4 1193 aa13.08□□□□□ -0.32
PSMD3-203ENST00000485835 GEMIN8Q9NWZ8 242 aaKnown RBP13.08□□□□□ -0.32
PSMD3-203ENST00000485835 FAM193AP78312 1265 aa13.07□□□□□ -0.32
PSMD3-203ENST00000485835 SYCP1Q15431 976 aa13.07□□□□□ -0.32
PSMD3-203ENST00000485835 TERF2Q15554 542 aa13.07□□□□□ -0.32
PSMD3-203ENST00000485835 CYP2E1P05181 493 aaPredicted RBP13.07□□□□□ -0.32
PSMD3-203ENST00000485835 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
PSMD3-203ENST00000485835 CTNNA3Q9UI47 895 aa13.07□□□□□ -0.32
PSMD3-203ENST00000485835 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
PSMD3-203ENST00000485835 DDX41Q9UJV9 622 aaKnown RBP13.06□□□□□ -0.32
PSMD3-203ENST00000485835 GRIN2AQ12879 1464 aa13.06□□□□□ -0.32
PSMD3-203ENST00000485835 CD2BP2O95400 341 aaKnown RBP13.06□□□□□ -0.32
PSMD3-203ENST00000485835 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
PSMD3-203ENST00000485835 GPT2Q8TD30 523 aa13.06□□□□□ -0.32
PSMD3-203ENST00000485835 EFCC1Q9HA90 598 aa13.06□□□□□ -0.32
PSMD3-203ENST00000485835 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
PSMD3-203ENST00000485835 MORC2Q9Y6X9 1032 aaPredicted RBP13.06□□□□□ -0.32
PSMD3-203ENST00000485835 PIK3C2GO75747 1445 aa13.06□□□□□ -0.32
PSMD3-203ENST00000485835 RIOK3O14730 519 aaKnown RBP13.05□□□□□ -0.32
PSMD3-203ENST00000485835 PSEN1P49768 467 aa13.05□□□□□ -0.32
PSMD3-203ENST00000485835 NUCB2P80303 420 aa13.05□□□□□ -0.32
PSMD3-203ENST00000485835 AEBP1Q8IUX7 1158 aa13.05□□□□□ -0.32
PSMD3-203ENST00000485835 RBM27Q9P2N5 1060 aaKnown RBP13.05□□□□□ -0.32
PSMD3-203ENST00000485835 UHRF1BP1LA0JNW5 1464 aa13.05□□□□□ -0.32
PSMD3-203ENST00000485835 KDM5DQ9BY66 1539 aa13.05□□□□□ -0.32
PSMD3-203ENST00000485835 PPP2R1AP30153 589 aa13.05□□□□□ -0.32
PSMD3-203ENST00000485835 CREBRFQ8IUR6 639 aa13.05□□□□□ -0.32
PSMD3-203ENST00000485835 CFAP74Q9C0B2 1584 aa13.05□□□□□ -0.32
PSMD3-203ENST00000485835 PRDM15P57071 1507 aaPredicted RBP13.04□□□□□ -0.32
PSMD3-203ENST00000485835 NGEFQ8N5V2 710 aa13.04□□□□□ -0.32
PSMD3-203ENST00000485835 SOX12O15370 315 aa13.04□□□□□ -0.32
PSMD3-203ENST00000485835 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
PSMD3-203ENST00000485835 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
PSMD3-203ENST00000485835 SYCE3A1L190 88 aa13.03□□□□□ -0.32
PSMD3-203ENST00000485835 ZBTB7CA1YPR0 619 aa13.03□□□□□ -0.32
PSMD3-203ENST00000485835 CHAF1AQ13111 956 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms