RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 RBM19Q9Y4C8 960 aaKnown RBP12.13□□□□□ -0.47
USP16-206ENST00000485067 SCAF11Q99590 1463 aaKnown RBP12.13□□□□□ -0.47
USP16-206ENST00000485067 MROH2AA6NES4 1674 aa12.12□□□□□ -0.47
USP16-206ENST00000485067 EFCAB6Q5THR3 1501 aa12.12□□□□□ -0.47
USP16-206ENST00000485067 LMTK2Q8IWU2 1503 aa12.12□□□□□ -0.47
USP16-206ENST00000485067 HECW2Q9P2P5 1572 aa12.12□□□□□ -0.47
USP16-206ENST00000485067 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
USP16-206ENST00000485067 RIMBP3CA6NJZ7 1639 aa12.11□□□□□ -0.47
USP16-206ENST00000485067 RIMBP3BA6NNM3 1639 aa12.11□□□□□ -0.47
USP16-206ENST00000485067 RIMBP3Q9UFD9 1639 aa12.11□□□□□ -0.47
USP16-206ENST00000485067 ADGRF5Q8IZF2 1346 aa12.11□□□□□ -0.47
USP16-206ENST00000485067 SYNMO15061 1565 aa12.11□□□□□ -0.47
USP16-206ENST00000485067 EIF3AQ14152 1382 aaKnown RBP12.11□□□□□ -0.47
USP16-206ENST00000485067 MYOM2P54296 1465 aa12.11□□□□□ -0.47
USP16-206ENST00000485067 DNAJC5Q9H3Z4 198 aa12.11□□□□□ -0.47
USP16-206ENST00000485067 MLH3Q9UHC1 1453 aa12.1□□□□□ -0.47
USP16-206ENST00000485067 CLSTN1O94985 981 aa12.1□□□□□ -0.47
USP16-206ENST00000485067 PANK3Q9H999 370 aa12.1□□□□□ -0.47
USP16-206ENST00000485067 IFT172Q9UG01 1749 aa12.1□□□□□ -0.47
USP16-206ENST00000485067 YEATS2Q9ULM3 1422 aa12.09□□□□□ -0.47
USP16-206ENST00000485067 PDE3BQ13370 1112 aa12.09□□□□□ -0.47
USP16-206ENST00000485067 CFAP70Q5T0N1 1121 aa12.09□□□□□ -0.47
USP16-206ENST00000485067 PRDM10Q9NQV6 1147 aa12.09□□□□□ -0.47
USP16-206ENST00000485067 MAP3K4Q9Y6R4 1608 aa12.09□□□□□ -0.47
USP16-206ENST00000485067 FANCIQ9NVI1 1328 aa12.09□□□□□ -0.47
USP16-206ENST00000485067 NPATQ14207 1427 aa12.09□□□□□ -0.47
USP16-206ENST00000485067 CHGAP10645 457 aaKnown RBP12.09□□□□□ -0.47
USP16-206ENST00000485067 SPRYD3Q8NCJ5 442 aa12.09□□□□□ -0.47
USP16-206ENST00000485067 ZNF592Q92610 1267 aa12.09□□□□□ -0.47
USP16-206ENST00000485067 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
USP16-206ENST00000485067 DIP2CQ9Y2E4 1556 aa12.07□□□□□ -0.48
USP16-206ENST00000485067 RICTORQ6R327 1708 aa12.07□□□□□ -0.48
USP16-206ENST00000485067 SIGLEC1Q9BZZ2 1709 aa12.07□□□□□ -0.48
USP16-206ENST00000485067 KDM5AP29375 1690 aaKnown RBP12.07□□□□□ -0.48
USP16-206ENST00000485067 CC2D1BQ5T0F9 858 aaKnown RBP12.07□□□□□ -0.48
USP16-206ENST00000485067 NUTM2DQ5VT03 806 aaPredicted RBP12.07□□□□□ -0.48
USP16-206ENST00000485067 TSPOAP1O95153 1857 aa12.07□□□□□ -0.48
USP16-206ENST00000485067 NEO1Q92859 1461 aa12.06□□□□□ -0.48
USP16-206ENST00000485067 FAM69CQ0P6D2 419 aa12.06□□□□□ -0.48
USP16-206ENST00000485067 BLMP54132 1417 aaPredicted RBP12.06□□□□□ -0.48
USP16-206ENST00000485067 ABCC3O15438 1527 aa12.05□□□□□ -0.48
USP16-206ENST00000485067 NPC1L1Q9UHC9 1359 aa12.05□□□□□ -0.48
USP16-206ENST00000485067 NRXN1Q9ULB1 1477 aa12.04□□□□□ -0.48
USP16-206ENST00000485067 MYOM1P52179 1685 aa12.04□□□□□ -0.48
USP16-206ENST00000485067 NOS1P29475 1434 aa12.04□□□□□ -0.48
USP16-206ENST00000485067 KNSTRNQ9Y448 316 aa12.04□□□□□ -0.48
USP16-206ENST00000485067 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
USP16-206ENST00000485067 WWC1Q8IX03 1113 aa12.03□□□□□ -0.48
USP16-206ENST00000485067 ADGRB3O60242 1522 aa12.03□□□□□ -0.48
USP16-206ENST00000485067 ASXL1Q8IXJ9 1541 aa12.03□□□□□ -0.48
USP16-206ENST00000485067 SETBP1Q9Y6X0 1596 aa12.03□□□□□ -0.48
USP16-206ENST00000485067 B4GALNT3Q6L9W6 998 aa12.03□□□□□ -0.48
USP16-206ENST00000485067 TMED8Q6PL24 325 aaPredicted RBP12.03□□□□□ -0.48
USP16-206ENST00000485067 CAMSAP1Q5T5Y3 1602 aa12.02□□□□□ -0.48
USP16-206ENST00000485067 RGL2O15211 777 aa12.02□□□□□ -0.49
USP16-206ENST00000485067 RRP9O43818 475 aaKnown RBP12.02□□□□□ -0.49
USP16-206ENST00000485067 ARID3AQ99856 593 aa12.02□□□□□ -0.49
USP16-206ENST00000485067 DIP2BQ9P265 1576 aa12.01□□□□□ -0.49
USP16-206ENST00000485067 PPLO60437 1756 aa12.01□□□□□ -0.49
USP16-206ENST00000485067 TMEM132EQ6IEE7 984 aa12□□□□□ -0.49
USP16-206ENST00000485067 SBNO2Q9Y2G9 1366 aa12□□□□□ -0.49
USP16-206ENST00000485067 KCNG1Q9UIX4 513 aa12□□□□□ -0.49
USP16-206ENST00000485067 PIK3C2GO75747 1445 aa11.99□□□□□ -0.49
USP16-206ENST00000485067 RCAN3Q9UKA8 241 aa11.99□□□□□ -0.49
USP16-206ENST00000485067 GLI2P10070 1586 aa11.99□□□□□ -0.49
USP16-206ENST00000485067 RPGRIP1LQ68CZ1 1315 aa11.98□□□□□ -0.49
USP16-206ENST00000485067 BRPF1P55201 1214 aaPredicted RBP11.98□□□□□ -0.49
USP16-206ENST00000485067 RRP1P56182 461 aaKnown RBP11.98□□□□□ -0.49
USP16-206ENST00000485067 RTL5Q5HYW3 569 aaPredicted RBP11.98□□□□□ -0.49
USP16-206ENST00000485067 PPP2R1AP30153 589 aa11.98□□□□□ -0.49
USP16-206ENST00000485067 GRIPAP1Q4V328 841 aa11.98□□□□□ -0.49
USP16-206ENST00000485067 FBXO31Q5XUX0 539 aaPredicted RBP11.98□□□□□ -0.49
USP16-206ENST00000485067 ERVK-7P63135 1459 aa11.98□□□□□ -0.49
USP16-206ENST00000485067 TRAK1Q9UPV9 953 aa11.97□□□□□ -0.49
USP16-206ENST00000485067 ZC3H13Q5T200 1668 aaKnown RBP11.97□□□□□ -0.49
USP16-206ENST00000485067 IDI1Q13907 227 aa11.97□□□□□ -0.49
USP16-206ENST00000485067 PSMD1Q99460 953 aa11.97□□□□□ -0.49
USP16-206ENST00000485067 PLCD4Q9BRC7 762 aa11.97□□□□□ -0.49
USP16-206ENST00000485067 MYO5BQ9ULV0 1848 aa11.96□□□□□ -0.5
USP16-206ENST00000485067 WDR43Q15061 677 aaKnown RBP eCLIP11.95□□□□□ -0.5
USP16-206ENST00000485067 HSP90AA2PQ14568 343 aaPredicted RBP11.95□□□□□ -0.5
USP16-206ENST00000485067 PRDM4Q9UKN5 801 aa11.95□□□□□ -0.5
USP16-206ENST00000485067 PIK3C2BO00750 1634 aa11.95□□□□□ -0.5
USP16-206ENST00000485067 ECM2O94769 699 aaPredicted RBP11.94□□□□□ -0.5
USP16-206ENST00000485067 ADAMTS8Q9UP79 889 aa11.94□□□□□ -0.5
USP16-206ENST00000485067 ADGRB1O14514 1584 aa11.94□□□□□ -0.5
USP16-206ENST00000485067 QRICH2Q9H0J4 1663 aa11.93□□□□□ -0.5
USP16-206ENST00000485067 MLECQ14165 292 aa11.93□□□□□ -0.5
USP16-206ENST00000485067 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
USP16-206ENST00000485067 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
USP16-206ENST00000485067 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
USP16-206ENST00000485067 CARD14Q9BXL6 1004 aa11.93□□□□□ -0.5
USP16-206ENST00000485067 NEXMIFQ5QGS0 1516 aa11.93□□□□□ -0.5
USP16-206ENST00000485067 CENPJQ9HC77 1338 aaPredicted RBP11.92□□□□□ -0.5
USP16-206ENST00000485067 PTMAP06454 111 aaKnown RBP11.91□□□□□ -0.5
USP16-206ENST00000485067 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
USP16-206ENST00000485067 NGEFQ8N5V2 710 aa11.91□□□□□ -0.5
USP16-206ENST00000485067 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
USP16-206ENST00000485067 CDCA7LQ96GN5 454 aa11.9□□□□□ -0.5
USP16-206ENST00000485067 USP32Q8NFA0 1604 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms