RNA–Protein interactions for RNA: ENST00000484822.1

RXRA-203, Transcript of retinoid X receptor alpha, humanhuman

TSL 2

Gene RXRA, Length 5,215 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-203ENST00000484822 TRAK2O60296 914 aa18.44■□□□□ 0.54
RXRA-203ENST00000484822 LTV1Q96GA3 475 aaPredicted RBP18.44■□□□□ 0.54
RXRA-203ENST00000484822 TAF7LQ5H9L4 462 aa18.44■□□□□ 0.54
RXRA-203ENST00000484822 TSR1Q2NL82 804 aaKnown RBP18.43■□□□□ 0.54
RXRA-203ENST00000484822 NUCB2P80303 420 aa18.43■□□□□ 0.54
RXRA-203ENST00000484822 CCDC7Q96M83 1385 aa18.43■□□□□ 0.54
RXRA-203ENST00000484822 BICD2Q8TD16 824 aa18.42■□□□□ 0.54
RXRA-203ENST00000484822 ZNF608Q9ULD9 1512 aaPredicted RBP18.42■□□□□ 0.54
RXRA-203ENST00000484822 MTERF4Q7Z6M4 381 aaKnown RBP18.42■□□□□ 0.54
RXRA-203ENST00000484822 PCF11O94913 1555 aaKnown RBP18.41■□□□□ 0.54
RXRA-203ENST00000484822 KIF7Q2M1P5 1343 aa18.41■□□□□ 0.54
RXRA-203ENST00000484822 TPM2P07951 284 aa18.41■□□□□ 0.54
RXRA-203ENST00000484822 DDX19BQ9UMR2 479 aa18.41■□□□□ 0.54
RXRA-203ENST00000484822 SLC52A1Q9NWF4 448 aa18.4■□□□□ 0.54
RXRA-203ENST00000484822 ROCK1Q13464 1354 aa18.4■□□□□ 0.54
RXRA-203ENST00000484822 PLB1Q6P1J6 1458 aa18.4■□□□□ 0.54
RXRA-203ENST00000484822 LNPKQ9C0E8 428 aa18.4■□□□□ 0.54
RXRA-203ENST00000484822 DIAPH3Q9NSV4 1193 aa18.4■□□□□ 0.54
RXRA-203ENST00000484822 TPM1P09493 284 aa18.4■□□□□ 0.54
RXRA-203ENST00000484822 DZIP1LQ8IYY4 767 aaKnown RBP18.4■□□□□ 0.54
RXRA-203ENST00000484822 MAP3K1Q13233 1512 aa18.4■□□□□ 0.54
RXRA-203ENST00000484822 VPS37CA5D8V6 355 aaPredicted RBP18.39■□□□□ 0.54
RXRA-203ENST00000484822 ANO2Q9NQ90 1003 aa18.39■□□□□ 0.53
RXRA-203ENST00000484822 CCDC39Q9UFE4 941 aa18.39■□□□□ 0.53
RXRA-203ENST00000484822 CCDC70Q6NSX1 233 aa18.39■□□□□ 0.53
RXRA-203ENST00000484822 NGEFQ8N5V2 710 aa18.39■□□□□ 0.53
RXRA-203ENST00000484822 RAPGEF3O95398 923 aa18.38■□□□□ 0.53
RXRA-203ENST00000484822 FBXW7Q969H0 707 aa18.38■□□□□ 0.53
RXRA-203ENST00000484822 CEP89Q96ST8 783 aa18.38■□□□□ 0.53
RXRA-203ENST00000484822 MNS1Q8NEH6 495 aa18.38■□□□□ 0.53
RXRA-203ENST00000484822 ATF3P18847 181 aa18.37■□□□□ 0.53
RXRA-203ENST00000484822 CCDC141Q6ZP82 1450 aa18.37■□□□□ 0.53
RXRA-203ENST00000484822 ARGLU1Q9NWB6 273 aaPredicted RBP18.36■□□□□ 0.53
RXRA-203ENST00000484822 ARHGEF11O15085 1522 aa18.36■□□□□ 0.53
RXRA-203ENST00000484822 CAVIN1Q6NZI2 390 aaKnown RBP18.36■□□□□ 0.53
RXRA-203ENST00000484822 PSME1Q06323 249 aa18.36■□□□□ 0.53
RXRA-203ENST00000484822 CFAP70Q5T0N1 1121 aa18.36■□□□□ 0.53
RXRA-203ENST00000484822 TMEM132EQ6IEE7 984 aa18.36■□□□□ 0.53
RXRA-203ENST00000484822 CNTLNQ9NXG0 1405 aa18.35■□□□□ 0.53
RXRA-203ENST00000484822 PANK1Q8TE04 598 aa18.35■□□□□ 0.53
RXRA-203ENST00000484822 DIAPH1O60610 1272 aaKnown RBP18.35■□□□□ 0.53
RXRA-203ENST00000484822 WASHC2AQ641Q2 1341 aa18.35■□□□□ 0.53
RXRA-203ENST00000484822 ZKSCAN1P17029 563 aaPredicted RBP18.35■□□□□ 0.53
RXRA-203ENST00000484822 SASS6Q6UVJ0 657 aa18.35■□□□□ 0.53
RXRA-203ENST00000484822 CD109Q6YHK3 1445 aa18.34■□□□□ 0.53
RXRA-203ENST00000484822 MSH5O43196 834 aa18.34■□□□□ 0.53
RXRA-203ENST00000484822 TXNDC2Q86VQ3 553 aa18.34■□□□□ 0.53
RXRA-203ENST00000484822 POGZQ7Z3K3 1410 aa18.34■□□□□ 0.53
RXRA-203ENST00000484822 C1orf141Q5JVX7 400 aa18.34■□□□□ 0.53
RXRA-203ENST00000484822 SMC3Q9UQE7 1217 aa18.34■□□□□ 0.53
RXRA-203ENST00000484822 IPO7O95373 1038 aaKnown RBP18.33■□□□□ 0.52
RXRA-203ENST00000484822 KIF14Q15058 1648 aa18.33■□□□□ 0.52
RXRA-203ENST00000484822 THEMISQ8N1K5 641 aaPredicted RBP18.33■□□□□ 0.52
RXRA-203ENST00000484822 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
RXRA-203ENST00000484822 NOM1Q5C9Z4 860 aaKnown RBP18.32■□□□□ 0.52
RXRA-203ENST00000484822 INTS3Q68E01 1043 aaKnown RBP18.31■□□□□ 0.52
RXRA-203ENST00000484822 RPGRIP1LQ68CZ1 1315 aa18.31■□□□□ 0.52
RXRA-203ENST00000484822 HSP90B2PQ58FF3 399 aa18.3■□□□□ 0.52
RXRA-203ENST00000484822 NAIPQ13075 1403 aa18.3■□□□□ 0.52
RXRA-203ENST00000484822 CCDC66A2RUB6 948 aa18.3■□□□□ 0.52
RXRA-203ENST00000484822 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
RXRA-203ENST00000484822 PODXL2Q9NZ53 605 aa18.3■□□□□ 0.52
RXRA-203ENST00000484822 CAMSAP2Q08AD1 1489 aa18.3■□□□□ 0.52
RXRA-203ENST00000484822 MARCH6O60337 910 aa18.29■□□□□ 0.52
RXRA-203ENST00000484822 PCMTD1Q96MG8 357 aaPredicted RBP18.29■□□□□ 0.52
RXRA-203ENST00000484822 CABP2Q9NPB3 220 aa18.29■□□□□ 0.52
RXRA-203ENST00000484822 CDCA7LQ96GN5 454 aa18.28■□□□□ 0.52
RXRA-203ENST00000484822 CCDC173Q0VFZ6 552 aa18.28■□□□□ 0.52
RXRA-203ENST00000484822 CHMP4CQ96CF2 233 aa18.28■□□□□ 0.52
RXRA-203ENST00000484822 TEFQ10587 303 aa18.27■□□□□ 0.52
RXRA-203ENST00000484822 MPNDQ8N594 471 aa18.27■□□□□ 0.52
RXRA-203ENST00000484822 ANKRD30BQ9BXX2 1392 aa18.27■□□□□ 0.52
RXRA-203ENST00000484822 PRPF40AO75400 957 aaKnown RBP18.27■□□□□ 0.52
RXRA-203ENST00000484822 HMGB2P26583 209 aaKnown RBP18.27■□□□□ 0.51
RXRA-203ENST00000484822 FOSBP53539 338 aa18.27■□□□□ 0.51
RXRA-203ENST00000484822 HMGN5P82970 282 aaKnown RBP18.27■□□□□ 0.51
RXRA-203ENST00000484822 BACH2Q9BYV9 841 aa18.27■□□□□ 0.51
RXRA-203ENST00000484822 CCDC73Q6ZRK6 1079 aa18.26■□□□□ 0.51
RXRA-203ENST00000484822 AKAP17AQ02040 695 aaKnown RBP18.26■□□□□ 0.51
RXRA-203ENST00000484822 CPLX2Q6PUV4 134 aaKnown RBP18.26■□□□□ 0.51
RXRA-203ENST00000484822 CALRP27797 417 aaKnown RBP18.26■□□□□ 0.51
RXRA-203ENST00000484822 ADGRL1O94910 1474 aa18.26■□□□□ 0.51
RXRA-203ENST00000484822 CPLX1O14810 134 aa18.26■□□□□ 0.51
RXRA-203ENST00000484822 TRIM5Q9C035 493 aa18.25■□□□□ 0.51
RXRA-203ENST00000484822 RUFY1Q96T51 708 aa18.25■□□□□ 0.51
RXRA-203ENST00000484822 API5Q9BZZ5 524 aaKnown RBP18.25■□□□□ 0.51
RXRA-203ENST00000484822 PTPN23Q9H3S7 1636 aa18.25■□□□□ 0.51
RXRA-203ENST00000484822 TTC5Q8N0Z6 440 aa18.25■□□□□ 0.51
RXRA-203ENST00000484822 NBPF1Q3BBV0 1214 aa18.24■□□□□ 0.51
RXRA-203ENST00000484822 ACBD3Q9H3P7 528 aa18.24■□□□□ 0.51
RXRA-203ENST00000484822 RIPK4P57078 832 aa18.24■□□□□ 0.51
RXRA-203ENST00000484822 ABCC5O15440 1437 aa18.24■□□□□ 0.51
RXRA-203ENST00000484822 ANKRD20A12PQ8NF67 263 aa18.24■□□□□ 0.51
RXRA-203ENST00000484822 RUNDC1Q96C34 613 aa18.24■□□□□ 0.51
RXRA-203ENST00000484822 RRP9O43818 475 aaKnown RBP18.24■□□□□ 0.51
RXRA-203ENST00000484822 GRPEL1Q9HAV7 217 aa18.24■□□□□ 0.51
RXRA-203ENST00000484822 CDC45O75419 566 aa18.23■□□□□ 0.51
RXRA-203ENST00000484822 SF3B2Q13435 895 aaKnown RBP18.23■□□□□ 0.51
RXRA-203ENST00000484822 GGNBP2Q9H3C7 697 aa18.23■□□□□ 0.51
RXRA-203ENST00000484822 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms