RNA–Protein interactions for RNA: ENST00000484236.1

SHROOM3-206, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-206ENST00000484236 QRICH2Q9H0J4 1663 aa9.87□□□□□ -0.83
SHROOM3-206ENST00000484236 VGFO15240 615 aaPredicted RBP9.87□□□□□ -0.83
SHROOM3-206ENST00000484236 USP32Q8NFA0 1604 aa9.85□□□□□ -0.83
SHROOM3-206ENST00000484236 YEATS2Q9ULM3 1422 aa9.85□□□□□ -0.83
SHROOM3-206ENST00000484236 CHGAP10645 457 aaKnown RBP9.85□□□□□ -0.83
SHROOM3-206ENST00000484236 PPP2R1AP30153 589 aa9.85□□□□□ -0.83
SHROOM3-206ENST00000484236 CYB5RLQ6IPT4 315 aa9.85□□□□□ -0.83
SHROOM3-206ENST00000484236 TMEM131LA2VDJ0 1609 aa9.85□□□□□ -0.83
SHROOM3-206ENST00000484236 ARHGEF28Q8N1W1 1705 aaKnown RBP9.84□□□□□ -0.83
SHROOM3-206ENST00000484236 ZBTB12Q9Y330 459 aaPredicted RBP9.83□□□□□ -0.84
SHROOM3-206ENST00000484236 IRX6P78412 446 aaPredicted RBP9.82□□□□□ -0.84
SHROOM3-206ENST00000484236 FAM69CQ0P6D2 419 aa9.82□□□□□ -0.84
SHROOM3-206ENST00000484236 NGEFQ8N5V2 710 aa9.82□□□□□ -0.84
SHROOM3-206ENST00000484236 MYO5BQ9ULV0 1848 aa9.82□□□□□ -0.84
SHROOM3-206ENST00000484236 TSPOAP1O95153 1857 aa9.81□□□□□ -0.84
SHROOM3-206ENST00000484236 MYCNP04198 464 aaPredicted RBP9.81□□□□□ -0.84
SHROOM3-206ENST00000484236 KCNA4P22459 653 aa9.81□□□□□ -0.84
SHROOM3-206ENST00000484236 WDR43Q15061 677 aaKnown RBP eCLIP9.81□□□□□ -0.84
SHROOM3-206ENST00000484236 NINLQ9Y2I6 1382 aa9.8□□□□□ -0.84
SHROOM3-206ENST00000484236 IDI1Q13907 227 aa9.8□□□□□ -0.84
SHROOM3-206ENST00000484236 RCAN3Q9UKA8 241 aa9.8□□□□□ -0.84
SHROOM3-206ENST00000484236 NSD2O96028 1365 aa9.79□□□□□ -0.84
SHROOM3-206ENST00000484236 ARHGEF40Q8TER5 1519 aa9.79□□□□□ -0.84
SHROOM3-206ENST00000484236 ADAMTS8Q9UP79 889 aa9.79□□□□□ -0.84
SHROOM3-206ENST00000484236 SPATA31D1Q6ZQQ2 1576 aa9.79□□□□□ -0.84
SHROOM3-206ENST00000484236 EVC2Q86UK5 1308 aa9.79□□□□□ -0.84
SHROOM3-206ENST00000484236 POLR3AO14802 1390 aaPredicted RBP9.78□□□□□ -0.84
SHROOM3-206ENST00000484236 CLTCQ00610 1675 aaKnown RBP9.78□□□□□ -0.84
SHROOM3-206ENST00000484236 KIF13AQ9H1H9 1805 aa9.78□□□□□ -0.84
SHROOM3-206ENST00000484236 GABBR2O75899 941 aa9.78□□□□□ -0.84
SHROOM3-206ENST00000484236 RRP1P56182 461 aaKnown RBP9.78□□□□□ -0.84
SHROOM3-206ENST00000484236 CARD14Q9BXL6 1004 aa9.78□□□□□ -0.84
SHROOM3-206ENST00000484236 TRAK1Q9UPV9 953 aa9.78□□□□□ -0.84
SHROOM3-206ENST00000484236 TULP4Q9NRJ4 1543 aa9.77□□□□□ -0.85
SHROOM3-206ENST00000484236 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
SHROOM3-206ENST00000484236 NSD3Q9BZ95 1437 aa9.76□□□□□ -0.85
SHROOM3-206ENST00000484236 MYT1Q01538 1121 aa9.76□□□□□ -0.85
SHROOM3-206ENST00000484236 TMEM132EQ6IEE7 984 aa9.76□□□□□ -0.85
SHROOM3-206ENST00000484236 B4GALNT3Q6L9W6 998 aa9.76□□□□□ -0.85
SHROOM3-206ENST00000484236 RBM19Q9Y4C8 960 aaKnown RBP9.76□□□□□ -0.85
SHROOM3-206ENST00000484236 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
SHROOM3-206ENST00000484236 ZNF521Q96K83 1311 aa9.76□□□□□ -0.85
SHROOM3-206ENST00000484236 CCDC136Q96JN2 1154 aa9.75□□□□□ -0.85
SHROOM3-206ENST00000484236 DLC1Q96QB1 1528 aa9.75□□□□□ -0.85
SHROOM3-206ENST00000484236 ALKQ9UM73 1620 aa9.74□□□□□ -0.85
SHROOM3-206ENST00000484236 PTPRMP28827 1452 aa9.74□□□□□ -0.85
SHROOM3-206ENST00000484236 ATAD2Q6PL18 1390 aa9.74□□□□□ -0.85
SHROOM3-206ENST00000484236 YTHDC2Q9H6S0 1430 aaKnown RBP9.73□□□□□ -0.85
SHROOM3-206ENST00000484236 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
SHROOM3-206ENST00000484236 GOLGA2Q08379 1002 aa9.73□□□□□ -0.85
SHROOM3-206ENST00000484236 MORC1Q86VD1 984 aa9.73□□□□□ -0.85
SHROOM3-206ENST00000484236 CDCA7LQ96GN5 454 aa9.73□□□□□ -0.85
SHROOM3-206ENST00000484236 SHPRHQ149N8 1683 aa9.73□□□□□ -0.85
SHROOM3-206ENST00000484236 A2ML1A8K2U0 1454 aa9.72□□□□□ -0.85
SHROOM3-206ENST00000484236 MED14O60244 1454 aa9.72□□□□□ -0.85
SHROOM3-206ENST00000484236 C19orf67A6NJJ6 358 aa9.72□□□□□ -0.85
SHROOM3-206ENST00000484236 PRKAR2AP13861 404 aaKnown RBP9.72□□□□□ -0.85
SHROOM3-206ENST00000484236 SLC12A5Q9H2X9 1139 aa9.72□□□□□ -0.85
SHROOM3-206ENST00000484236 SALL2Q9Y467 1007 aaPredicted RBP9.72□□□□□ -0.85
SHROOM3-206ENST00000484236 SETD1AO15047 1707 aaKnown RBP9.72□□□□□ -0.85
SHROOM3-206ENST00000484236 FANCIQ9NVI1 1328 aa9.72□□□□□ -0.85
SHROOM3-206ENST00000484236 PLEKHH1Q9ULM0 1364 aa9.72□□□□□ -0.85
SHROOM3-206ENST00000484236 TRMT2AQ8IZ69 625 aaKnown RBP9.71□□□□□ -0.86
SHROOM3-206ENST00000484236 CFAP53Q96M91 514 aa9.71□□□□□ -0.86
SHROOM3-206ENST00000484236 STAG3Q9UJ98 1225 aa9.71□□□□□ -0.86
SHROOM3-206ENST00000484236 ATF5Q9Y2D1 282 aaPredicted RBP9.71□□□□□ -0.86
SHROOM3-206ENST00000484236 SLFN5Q08AF3 891 aa9.7□□□□□ -0.86
SHROOM3-206ENST00000484236 DUSP27Q5VZP5 1158 aa9.7□□□□□ -0.86
SHROOM3-206ENST00000484236 FBXO31Q5XUX0 539 aaPredicted RBP9.7□□□□□ -0.86
SHROOM3-206ENST00000484236 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.7□□□□□ -0.86
SHROOM3-206ENST00000484236 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.7□□□□□ -0.86
SHROOM3-206ENST00000484236 ABCC11Q96J66 1382 aa9.7□□□□□ -0.86
SHROOM3-206ENST00000484236 RIMS2Q9UQ26 1411 aa9.7□□□□□ -0.86
SHROOM3-206ENST00000484236 KNDC1Q76NI1 1749 aa9.7□□□□□ -0.86
SHROOM3-206ENST00000484236 SENP3-EIF4A1A0A087X0R7 540 aa9.69□□□□□ -0.86
SHROOM3-206ENST00000484236 E9PSI1 815 aa9.69□□□□□ -0.86
SHROOM3-206ENST00000484236 HDGFP51858 240 aaKnown RBP9.69□□□□□ -0.86
SHROOM3-206ENST00000484236 NUTM2DQ5VT03 806 aaPredicted RBP9.69□□□□□ -0.86
SHROOM3-206ENST00000484236 TERF2IPQ9NYB0 399 aa9.69□□□□□ -0.86
SHROOM3-206ENST00000484236 NKTRP30414 1462 aaKnown RBP9.68□□□□□ -0.86
SHROOM3-206ENST00000484236 APAF1O14727 1248 aa9.68□□□□□ -0.86
SHROOM3-206ENST00000484236 SIRT1Q96EB6 747 aa9.68□□□□□ -0.86
SHROOM3-206ENST00000484236 ESF1Q9H501 851 aaKnown RBP9.68□□□□□ -0.86
SHROOM3-206ENST00000484236 POGKQ9P215 609 aa9.68□□□□□ -0.86
SHROOM3-206ENST00000484236 A0A1W2PP64 1363 aa9.67□□□□□ -0.86
SHROOM3-206ENST00000484236 CCDC27Q2M243 656 aa9.67□□□□□ -0.86
SHROOM3-206ENST00000484236 EXOC6Q8TAG9 804 aa9.67□□□□□ -0.86
SHROOM3-206ENST00000484236 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
SHROOM3-206ENST00000484236 PRAM1Q96QH2 718 aa9.67□□□□□ -0.86
SHROOM3-206ENST00000484236 CABP2Q9NPB3 220 aa9.67□□□□□ -0.86
SHROOM3-206ENST00000484236 KIF20BQ96Q89 1820 aa9.67□□□□□ -0.86
SHROOM3-206ENST00000484236 NRXN3Q9Y4C0 1643 aa9.67□□□□□ -0.86
SHROOM3-206ENST00000484236 ATP7BP35670 1465 aa9.66□□□□□ -0.86
SHROOM3-206ENST00000484236 IQSEC2Q5JU85 1478 aa9.66□□□□□ -0.86
SHROOM3-206ENST00000484236 ZMYM3Q14202 1370 aa9.66□□□□□ -0.86
SHROOM3-206ENST00000484236 SRPK2P78362 688 aaKnown RBP9.66□□□□□ -0.86
SHROOM3-206ENST00000484236 STK26Q9P289 416 aa9.66□□□□□ -0.86
SHROOM3-206ENST00000484236 CD163L1Q9NR16 1453 aa9.66□□□□□ -0.86
SHROOM3-206ENST00000484236 TECPR2O15040 1411 aa9.65□□□□□ -0.86
SHROOM3-206ENST00000484236 MTHFSP49914 203 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms