RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 ADGRD1Q6QNK2 874 aa10□□□□□ -0.81
SEMA3D-204ENST00000484038 CERKQ8TCT0 537 aa10□□□□□ -0.81
SEMA3D-204ENST00000484038 PROX2Q3B8N5 592 aa9.99□□□□□ -0.81
SEMA3D-204ENST00000484038 STAC3Q96MF2 364 aa9.99□□□□□ -0.81
SEMA3D-204ENST00000484038 ZBED2Q9BTP6 218 aa9.99□□□□□ -0.81
SEMA3D-204ENST00000484038 MYO5CQ9NQX4 1742 aa9.99□□□□□ -0.81
SEMA3D-204ENST00000484038 PREX1Q8TCU6 1659 aa9.99□□□□□ -0.81
SEMA3D-204ENST00000484038 ARHGEF12Q9NZN5 1544 aa9.98□□□□□ -0.81
SEMA3D-204ENST00000484038 PLCH2O75038 1416 aa9.98□□□□□ -0.81
SEMA3D-204ENST00000484038 C9orf84Q5VXU9 1444 aa9.98□□□□□ -0.81
SEMA3D-204ENST00000484038 GPIHBP1Q8IV16 184 aa9.97□□□□□ -0.81
SEMA3D-204ENST00000484038 ATP1B4Q9UN42 357 aaPredicted RBP9.97□□□□□ -0.81
SEMA3D-204ENST00000484038 ATP10AO60312 1499 aa9.97□□□□□ -0.81
SEMA3D-204ENST00000484038 TK2O00142 265 aa9.97□□□□□ -0.81
SEMA3D-204ENST00000484038 VPS9D1Q9Y2B5 631 aa9.97□□□□□ -0.81
SEMA3D-204ENST00000484038 KIF14Q15058 1648 aa9.95□□□□□ -0.82
SEMA3D-204ENST00000484038 CEBPAP49715 358 aaPredicted RBP9.95□□□□□ -0.82
SEMA3D-204ENST00000484038 MYT1LQ9UL68 1186 aa9.95□□□□□ -0.82
SEMA3D-204ENST00000484038 ARHGAP5Q13017 1502 aa9.95□□□□□ -0.82
SEMA3D-204ENST00000484038 ZNF518AQ6AHZ1 1483 aa9.94□□□□□ -0.82
SEMA3D-204ENST00000484038 FCHSD2O94868 740 aa9.94□□□□□ -0.82
SEMA3D-204ENST00000484038 EFCAB2Q5VUJ9 269 aa9.94□□□□□ -0.82
SEMA3D-204ENST00000484038 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
SEMA3D-204ENST00000484038 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
SEMA3D-204ENST00000484038 FMN1Q68DA7 1419 aa9.93□□□□□ -0.82
SEMA3D-204ENST00000484038 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
SEMA3D-204ENST00000484038 PRSS12P56730 875 aa9.93□□□□□ -0.82
SEMA3D-204ENST00000484038 PTGDRQ13258 359 aa9.93□□□□□ -0.82
SEMA3D-204ENST00000484038 SLC4A5Q9BY07 1137 aa9.93□□□□□ -0.82
SEMA3D-204ENST00000484038 STRCQ7RTU9 1775 aa9.93□□□□□ -0.82
SEMA3D-204ENST00000484038 UHRF1BP1Q6BDS2 1440 aa9.93□□□□□ -0.82
SEMA3D-204ENST00000484038 SPNS2Q8IVW8 549 aa9.92□□□□□ -0.82
SEMA3D-204ENST00000484038 NBPF3Q9H094 633 aa9.92□□□□□ -0.82
SEMA3D-204ENST00000484038 NPDC1Q9NQX5 325 aaPredicted RBP9.92□□□□□ -0.82
SEMA3D-204ENST00000484038 DISP3Q9P2K9 1392 aa9.92□□□□□ -0.82
SEMA3D-204ENST00000484038 KDM5CP41229 1560 aa9.92□□□□□ -0.82
SEMA3D-204ENST00000484038 PADI6Q6TGC4 694 aa9.92□□□□□ -0.82
SEMA3D-204ENST00000484038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.92□□□□□ -0.82
SEMA3D-204ENST00000484038 KIAA1468Q9P260 1216 aa9.92□□□□□ -0.82
SEMA3D-204ENST00000484038 CDK11AQ9UQ88 783 aaPredicted RBP9.92□□□□□ -0.82
SEMA3D-204ENST00000484038 DIP2CQ9Y2E4 1556 aa9.92□□□□□ -0.82
SEMA3D-204ENST00000484038 CLIP1P30622 1438 aa9.91□□□□□ -0.82
SEMA3D-204ENST00000484038 UBTFP17480 764 aaKnown RBP9.91□□□□□ -0.82
SEMA3D-204ENST00000484038 PACS2Q86VP3 889 aa9.91□□□□□ -0.82
SEMA3D-204ENST00000484038 AFAP1Q8N556 730 aa9.91□□□□□ -0.82
SEMA3D-204ENST00000484038 RABGEF1Q9UJ41 708 aa9.91□□□□□ -0.82
SEMA3D-204ENST00000484038 TSKSQ9UJT2 592 aa9.91□□□□□ -0.82
SEMA3D-204ENST00000484038 ABCA6Q8N139 1617 aa9.91□□□□□ -0.82
SEMA3D-204ENST00000484038 TROQ12816 1431 aaPredicted RBP9.9□□□□□ -0.82
SEMA3D-204ENST00000484038 MRPL50Q8N5N7 158 aaKnown RBP9.9□□□□□ -0.82
SEMA3D-204ENST00000484038 C3P01024 1663 aa9.9□□□□□ -0.83
SEMA3D-204ENST00000484038 ARHGAP35Q9NRY4 1499 aa9.89□□□□□ -0.83
SEMA3D-204ENST00000484038 GOLGA8CPA6NN73 597 aa9.89□□□□□ -0.83
SEMA3D-204ENST00000484038 PLSCR2Q9NRY7 297 aa9.89□□□□□ -0.83
SEMA3D-204ENST00000484038 LRRIQ1Q96JM4 1722 aa9.89□□□□□ -0.83
SEMA3D-204ENST00000484038 NBPF26B4DH59 902 aa9.88□□□□□ -0.83
SEMA3D-204ENST00000484038 HRO43593 1189 aa9.88□□□□□ -0.83
SEMA3D-204ENST00000484038 HIC1Q14526 733 aa9.88□□□□□ -0.83
SEMA3D-204ENST00000484038 ESF1Q9H501 851 aaKnown RBP9.88□□□□□ -0.83
SEMA3D-204ENST00000484038 RBM27Q9P2N5 1060 aaKnown RBP9.88□□□□□ -0.83
SEMA3D-204ENST00000484038 SEPT9Q9UHD8 586 aaPredicted RBP9.88□□□□□ -0.83
SEMA3D-204ENST00000484038 REREQ9P2R6 1566 aa9.88□□□□□ -0.83
SEMA3D-204ENST00000484038 CDC42BPBQ9Y5S2 1711 aa9.88□□□□□ -0.83
SEMA3D-204ENST00000484038 SPATA31D1Q6ZQQ2 1576 aa9.87□□□□□ -0.83
SEMA3D-204ENST00000484038 ONECUT3O60422 494 aaPredicted RBP9.87□□□□□ -0.83
SEMA3D-204ENST00000484038 ILDR2Q71H61 639 aa9.87□□□□□ -0.83
SEMA3D-204ENST00000484038 PNMA3Q9UL41 463 aa9.87□□□□□ -0.83
SEMA3D-204ENST00000484038 PREX2Q70Z35 1606 aa9.87□□□□□ -0.83
SEMA3D-204ENST00000484038 ABCC1P33527 1531 aa9.86□□□□□ -0.83
SEMA3D-204ENST00000484038 ITSN2Q9NZM3 1697 aa9.86□□□□□ -0.83
SEMA3D-204ENST00000484038 MLH3Q9UHC1 1453 aa9.86□□□□□ -0.83
SEMA3D-204ENST00000484038 SMAPO00193 183 aa9.86□□□□□ -0.83
SEMA3D-204ENST00000484038 GNPATO15228 680 aa9.86□□□□□ -0.83
SEMA3D-204ENST00000484038 FAM198AQ9UFP1 575 aa9.86□□□□□ -0.83
SEMA3D-204ENST00000484038 PTPRTO14522 1441 aa9.85□□□□□ -0.83
SEMA3D-204ENST00000484038 TRAPPC8Q9Y2L5 1435 aa9.85□□□□□ -0.83
SEMA3D-204ENST00000484038 AGLP35573 1532 aa9.85□□□□□ -0.83
SEMA3D-204ENST00000484038 BHMG1C9JSJ3 638 aaPredicted RBP9.85□□□□□ -0.83
SEMA3D-204ENST00000484038 SETD1BQ9UPS6 1966 aaKnown RBP9.84□□□□□ -0.83
SEMA3D-204ENST00000484038 SOCS7O14512 581 aa9.84□□□□□ -0.83
SEMA3D-204ENST00000484038 GPR37O15354 613 aa9.84□□□□□ -0.83
SEMA3D-204ENST00000484038 NUDT18Q6ZVK8 323 aa9.84□□□□□ -0.83
SEMA3D-204ENST00000484038 RNF166Q96A37 237 aaPredicted RBP9.84□□□□□ -0.83
SEMA3D-204ENST00000484038 MMRN1Q13201 1228 aa9.83□□□□□ -0.84
SEMA3D-204ENST00000484038 TATDN2Q93075 761 aa9.83□□□□□ -0.84
SEMA3D-204ENST00000484038 KIDINS220Q9ULH0 1771 aa9.83□□□□□ -0.84
SEMA3D-204ENST00000484038 LTBP4Q8N2S1 1624 aa9.83□□□□□ -0.84
SEMA3D-204ENST00000484038 FECHP22830 423 aa9.82□□□□□ -0.84
SEMA3D-204ENST00000484038 FAM161AQ3B820 660 aa9.82□□□□□ -0.84
SEMA3D-204ENST00000484038 KCTD12Q96CX2 325 aaKnown RBP9.82□□□□□ -0.84
SEMA3D-204ENST00000484038 NCOA1Q15788 1441 aa9.82□□□□□ -0.84
SEMA3D-204ENST00000484038 CNTLNQ9NXG0 1405 aa9.82□□□□□ -0.84
SEMA3D-204ENST00000484038 CCDC18Q5T9S5 1454 aa9.82□□□□□ -0.84
SEMA3D-204ENST00000484038 CDC42BPAQ5VT25 1732 aa9.82□□□□□ -0.84
SEMA3D-204ENST00000484038 CAMSAP1Q5T5Y3 1602 aa9.81□□□□□ -0.84
SEMA3D-204ENST00000484038 FAM98CQ17RN3 349 aaKnown RBP9.81□□□□□ -0.84
SEMA3D-204ENST00000484038 LAPTM4BQ86VI4 370 aa9.81□□□□□ -0.84
SEMA3D-204ENST00000484038 TTC13Q8NBP0 860 aa9.81□□□□□ -0.84
SEMA3D-204ENST00000484038 MROH2AA6NES4 1674 aa9.8□□□□□ -0.84
SEMA3D-204ENST00000484038 SAMD9LQ8IVG5 1584 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms