RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.59□□□□□ -1.19
LRCH3-217ENST00000483442 REPIN1Q9BWE0 567 aaKnown RBP7.59□□□□□ -1.19
LRCH3-217ENST00000483442 ST8SIA5O15466 376 aa7.58□□□□□ -1.2
LRCH3-217ENST00000483442 RPIAP49247 311 aa7.58□□□□□ -1.2
LRCH3-217ENST00000483442 GUCA2AQ02747 115 aa7.58□□□□□ -1.2
LRCH3-217ENST00000483442 MSS51Q4VC12 460 aa7.58□□□□□ -1.2
LRCH3-217ENST00000483442 CC2D2AQ9P2K1 1620 aa7.57□□□□□ -1.2
LRCH3-217ENST00000483442 KDM4AO75164 1064 aa7.57□□□□□ -1.2
LRCH3-217ENST00000483442 ZNF775Q96BV0 537 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-217ENST00000483442 TOR4AQ9NXH8 423 aa7.56□□□□□ -1.2
LRCH3-217ENST00000483442 MMP16P51512 607 aa7.55□□□□□ -1.2
LRCH3-217ENST00000483442 SYMPKQ92797 1274 aaKnown RBP7.55□□□□□ -1.2
LRCH3-217ENST00000483442 AAASQ9NRG9 546 aa7.55□□□□□ -1.2
LRCH3-217ENST00000483442 FAM217BQ9NTX9 383 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-217ENST00000483442 DACH1Q9UI36 760 aa7.55□□□□□ -1.2
LRCH3-217ENST00000483442 HOXA2O43364 376 aa7.54□□□□□ -1.2
LRCH3-217ENST00000483442 GRIPAP1Q4V328 841 aa7.54□□□□□ -1.2
LRCH3-217ENST00000483442 DXOO77932 396 aaKnown RBP7.53□□□□□ -1.2
LRCH3-217ENST00000483442 CD2BP2O95400 341 aaKnown RBP7.53□□□□□ -1.2
LRCH3-217ENST00000483442 USB1Q9BQ65 265 aaKnown RBP7.53□□□□□ -1.2
LRCH3-217ENST00000483442 GPCPD1Q9NPB8 672 aa7.53□□□□□ -1.2
LRCH3-217ENST00000483442 TULP1O00294 542 aaPredicted RBP7.52□□□□□ -1.21
LRCH3-217ENST00000483442 Q3C1V9 767 aa7.52□□□□□ -1.21
LRCH3-217ENST00000483442 LMOD2Q6P5Q4 547 aa7.52□□□□□ -1.21
LRCH3-217ENST00000483442 CLCN1P35523 988 aa7.5□□□□□ -1.21
LRCH3-217ENST00000483442 TRIM32Q13049 653 aa7.5□□□□□ -1.21
LRCH3-217ENST00000483442 PCDHGC3Q9UN70 934 aa7.5□□□□□ -1.21
LRCH3-217ENST00000483442 ZBTB24O43167 697 aaPredicted RBP7.49□□□□□ -1.21
LRCH3-217ENST00000483442 AVPP01185 164 aa7.49□□□□□ -1.21
LRCH3-217ENST00000483442 USP46P62068 366 aa7.49□□□□□ -1.21
LRCH3-217ENST00000483442 SKOR1P84550 965 aa7.49□□□□□ -1.21
LRCH3-217ENST00000483442 CYP4X1Q8N118 509 aa7.49□□□□□ -1.21
LRCH3-217ENST00000483442 ZMYND10O75800 440 aa7.48□□□□□ -1.21
LRCH3-217ENST00000483442 SMPD1P17405 629 aa7.48□□□□□ -1.21
LRCH3-217ENST00000483442 PTCRAQ6ISU1 281 aaPredicted RBP7.48□□□□□ -1.21
LRCH3-217ENST00000483442 BARGINQ6ZT62 677 aa7.48□□□□□ -1.21
LRCH3-217ENST00000483442 CCDC24Q8N4L8 307 aa7.48□□□□□ -1.21
LRCH3-217ENST00000483442 ZC3H15Q8WU90 426 aaKnown RBP7.48□□□□□ -1.21
LRCH3-217ENST00000483442 MRGPRX2Q96LB1 330 aa7.48□□□□□ -1.21
LRCH3-217ENST00000483442 J3QL48 77 aa7.47□□□□□ -1.21
LRCH3-217ENST00000483442 WNT7AO00755 349 aa7.47□□□□□ -1.21
LRCH3-217ENST00000483442 SSTR3P32745 418 aaPredicted RBP7.47□□□□□ -1.21
LRCH3-217ENST00000483442 CRIPAKQ8N1N5 446 aa7.47□□□□□ -1.21
LRCH3-217ENST00000483442 EIF4G1Q04637 1599 aaKnown RBP7.46□□□□□ -1.21
LRCH3-217ENST00000483442 NDUFV2P19404 249 aa7.46□□□□□ -1.22
LRCH3-217ENST00000483442 KRI1Q8N9T8 703 aaKnown RBP7.46□□□□□ -1.22
LRCH3-217ENST00000483442 SPIRE2Q8WWL2 714 aa7.46□□□□□ -1.22
LRCH3-217ENST00000483442 MYO15BQ96JP2 1530 aa7.46□□□□□ -1.22
LRCH3-217ENST00000483442 JUNDP17535 347 aa7.45□□□□□ -1.22
LRCH3-217ENST00000483442 NUTM1Q86Y26 1132 aa7.45□□□□□ -1.22
LRCH3-217ENST00000483442 GMPR2Q9P2T1 348 aaKnown RBP7.45□□□□□ -1.22
LRCH3-217ENST00000483442 TTC24A2A3L6 582 aaPredicted RBP7.44□□□□□ -1.22
LRCH3-217ENST00000483442 FDX1P10109 184 aa7.44□□□□□ -1.22
LRCH3-217ENST00000483442 SNIP1Q8TAD8 396 aaKnown RBP7.44□□□□□ -1.22
LRCH3-217ENST00000483442 MOXD2PA6NHM9 499 aa7.43□□□□□ -1.22
LRCH3-217ENST00000483442 AXIN1O15169 862 aa7.43□□□□□ -1.22
LRCH3-217ENST00000483442 RC3H1Q5TC82 1133 aaKnown RBP7.43□□□□□ -1.22
LRCH3-217ENST00000483442 SMCPP49901 116 aaPredicted RBP7.42□□□□□ -1.22
LRCH3-217ENST00000483442 AMHR2Q16671 573 aa7.42□□□□□ -1.22
LRCH3-217ENST00000483442 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
LRCH3-217ENST00000483442 GIGYF2Q6Y7W6 1299 aaKnown RBP7.42□□□□□ -1.22
LRCH3-217ENST00000483442 RETREG3Q86VR2 466 aa7.42□□□□□ -1.22
LRCH3-217ENST00000483442 HPS1Q92902 700 aa7.42□□□□□ -1.22
LRCH3-217ENST00000483442 C6orf229H3BNL8 230 aa7.41□□□□□ -1.22
LRCH3-217ENST00000483442 TTLL12Q14166 644 aaPredicted RBP7.41□□□□□ -1.22
LRCH3-217ENST00000483442 NUDT12Q9BQG2 462 aa7.4□□□□□ -1.22
LRCH3-217ENST00000483442 SHROOM4Q9ULL8 1493 aa7.4□□□□□ -1.22
LRCH3-217ENST00000483442 MS4A1P11836 297 aa7.39□□□□□ -1.23
LRCH3-217ENST00000483442 WNT7BP56706 349 aa7.39□□□□□ -1.23
LRCH3-217ENST00000483442 CTC1Q2NKJ3 1217 aa7.39□□□□□ -1.23
LRCH3-217ENST00000483442 PARP9Q8IXQ6 854 aa7.39□□□□□ -1.23
LRCH3-217ENST00000483442 BEGAINQ9BUH8 593 aa7.39□□□□□ -1.23
LRCH3-217ENST00000483442 SCRIBQ14160 1630 aa7.38□□□□□ -1.23
LRCH3-217ENST00000483442 TRIM66O15016 1216 aa7.38□□□□□ -1.23
LRCH3-217ENST00000483442 SIAH2O43255 324 aa7.38□□□□□ -1.23
LRCH3-217ENST00000483442 PCDHB15Q9Y5E8 787 aa7.38□□□□□ -1.23
LRCH3-217ENST00000483442 C11orf95C9JLR9 678 aaPredicted RBP7.37□□□□□ -1.23
LRCH3-217ENST00000483442 SNRPBP14678 240 aaKnown RBP7.37□□□□□ -1.23
LRCH3-217ENST00000483442 SH3BP2P78314 561 aa7.37□□□□□ -1.23
LRCH3-217ENST00000483442 TREML4Q6UXN2 200 aa7.37□□□□□ -1.23
LRCH3-217ENST00000483442 PRR7Q8TB68 274 aa7.37□□□□□ -1.23
LRCH3-217ENST00000483442 ATP13A2Q9NQ11 1180 aa7.37□□□□□ -1.23
LRCH3-217ENST00000483442 LCE2CQ5TA81 110 aa7.36□□□□□ -1.23
LRCH3-217ENST00000483442 TBC1D2Q9BYX2 928 aa7.36□□□□□ -1.23
LRCH3-217ENST00000483442 CUX2O14529 1486 aa7.36□□□□□ -1.23
LRCH3-217ENST00000483442 ALDH1A1P00352 501 aa7.35□□□□□ -1.23
LRCH3-217ENST00000483442 CCNYL3P0C7X3 344 aa7.35□□□□□ -1.23
LRCH3-217ENST00000483442 LINC01559Q495D7 138 aa7.35□□□□□ -1.23
LRCH3-217ENST00000483442 EVA1BQ9NVM1 165 aa7.35□□□□□ -1.23
LRCH3-217ENST00000483442 MTMR2Q13614 643 aa7.34□□□□□ -1.23
LRCH3-217ENST00000483442 PTPRNQ16849 979 aa7.34□□□□□ -1.23
LRCH3-217ENST00000483442 RSBN1LQ6PCB5 846 aaPredicted RBP7.34□□□□□ -1.23
LRCH3-217ENST00000483442 BAP1Q92560 729 aa7.34□□□□□ -1.23
LRCH3-217ENST00000483442 UNC93B1Q9H1C4 597 aa7.34□□□□□ -1.23
LRCH3-217ENST00000483442 ERCC6Q03468 1493 aa7.33□□□□□ -1.24
LRCH3-217ENST00000483442 CFAP99D6REC4 459 aa7.33□□□□□ -1.24
LRCH3-217ENST00000483442 KCNH2Q12809 1159 aa7.32□□□□□ -1.24
LRCH3-217ENST00000483442 NFX1Q12986 1120 aaKnown RBP7.32□□□□□ -1.24
LRCH3-217ENST00000483442 EHBP1Q8NDI1 1231 aa7.32□□□□□ -1.24
LRCH3-217ENST00000483442 CABLES1Q8TDN4 633 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms