RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 MYOM2P54296 1465 aa15.88■□□□□ 0.13
CCDC78-213ENST00000482878 NEUROD2Q15784 382 aa15.88■□□□□ 0.13
CCDC78-213ENST00000482878 NGEFQ8N5V2 710 aa15.88■□□□□ 0.13
CCDC78-213ENST00000482878 ABCA6Q8N139 1617 aa15.88■□□□□ 0.13
CCDC78-213ENST00000482878 MAP3K4Q9Y6R4 1608 aa15.88■□□□□ 0.13
CCDC78-213ENST00000482878 ATP7AQ04656 1500 aa15.88■□□□□ 0.13
CCDC78-213ENST00000482878 POLR3AO14802 1390 aaPredicted RBP15.87■□□□□ 0.13
CCDC78-213ENST00000482878 CLUAP1Q96AJ1 413 aa15.87■□□□□ 0.13
CCDC78-213ENST00000482878 SLKQ9H2G2 1235 aaPredicted RBP15.87■□□□□ 0.13
CCDC78-213ENST00000482878 USP19O94966 1318 aa15.87■□□□□ 0.13
CCDC78-213ENST00000482878 A0A0U1RQG5 324 aaPredicted RBP15.87■□□□□ 0.13
CCDC78-213ENST00000482878 ARAP3Q8WWN8 1544 aa15.87■□□□□ 0.13
CCDC78-213ENST00000482878 CANXP27824 592 aaKnown RBP15.87■□□□□ 0.13
CCDC78-213ENST00000482878 CYB5RLQ6IPT4 315 aa15.87■□□□□ 0.13
CCDC78-213ENST00000482878 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
CCDC78-213ENST00000482878 FANCAO15360 1455 aa15.85■□□□□ 0.13
CCDC78-213ENST00000482878 NEURL4Q96JN8 1562 aa15.85■□□□□ 0.13
CCDC78-213ENST00000482878 SEC24BO95487 1268 aa15.85■□□□□ 0.13
CCDC78-213ENST00000482878 MORC1Q86VD1 984 aa15.84■□□□□ 0.13
CCDC78-213ENST00000482878 INO80Q9ULG1 1556 aaPredicted RBP15.84■□□□□ 0.13
CCDC78-213ENST00000482878 SLC12A5Q9H2X9 1139 aa15.84■□□□□ 0.13
CCDC78-213ENST00000482878 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
CCDC78-213ENST00000482878 NSD3Q9BZ95 1437 aa15.84■□□□□ 0.13
CCDC78-213ENST00000482878 GZF1Q9H116 711 aaPredicted RBP15.84■□□□□ 0.13
CCDC78-213ENST00000482878 STK26Q9P289 416 aa15.84■□□□□ 0.13
CCDC78-213ENST00000482878 MROH1Q8NDA8 1641 aa15.83■□□□□ 0.13
CCDC78-213ENST00000482878 TRAK1Q9UPV9 953 aa15.83■□□□□ 0.12
CCDC78-213ENST00000482878 SBNO2Q9Y2G9 1366 aa15.83■□□□□ 0.12
CCDC78-213ENST00000482878 RARSP54136 660 aaKnown RBP15.82■□□□□ 0.12
CCDC78-213ENST00000482878 TCP11L2Q8N4U5 519 aa15.82■□□□□ 0.12
CCDC78-213ENST00000482878 TNNQ9UQP3 1299 aa15.82■□□□□ 0.12
CCDC78-213ENST00000482878 NINLQ9Y2I6 1382 aa15.82■□□□□ 0.12
CCDC78-213ENST00000482878 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
CCDC78-213ENST00000482878 NOS1P29475 1434 aa15.82■□□□□ 0.12
CCDC78-213ENST00000482878 NRXN1Q9ULB1 1477 aa15.82■□□□□ 0.12
CCDC78-213ENST00000482878 MAPK8IP3Q9UPT6 1336 aa15.81■□□□□ 0.12
CCDC78-213ENST00000482878 ADGRL1O94910 1474 aa15.81■□□□□ 0.12
CCDC78-213ENST00000482878 RLBP1P12271 317 aa15.81■□□□□ 0.12
CCDC78-213ENST00000482878 PHF23Q9BUL5 403 aaPredicted RBP15.8■□□□□ 0.12
CCDC78-213ENST00000482878 BCL2L13Q9BXK5 485 aa15.8■□□□□ 0.12
CCDC78-213ENST00000482878 PCDHB15Q9Y5E8 787 aa15.8■□□□□ 0.12
CCDC78-213ENST00000482878 EFCAB6Q5THR3 1501 aa15.79■□□□□ 0.12
CCDC78-213ENST00000482878 GOLGA6L3A6NEY3 463 aa15.79■□□□□ 0.12
CCDC78-213ENST00000482878 OSCARQ8IYS5 282 aa15.79■□□□□ 0.12
CCDC78-213ENST00000482878 TMEM132EQ6IEE7 984 aa15.79■□□□□ 0.12
CCDC78-213ENST00000482878 ABCA9Q8IUA7 1624 aa15.79■□□□□ 0.12
CCDC78-213ENST00000482878 RAPGEF3O95398 923 aa15.78■□□□□ 0.12
CCDC78-213ENST00000482878 MTHFSP49914 203 aa15.78■□□□□ 0.12
CCDC78-213ENST00000482878 MROH2AA6NES4 1674 aa15.78■□□□□ 0.12
CCDC78-213ENST00000482878 MYO3AQ8NEV4 1616 aa15.78■□□□□ 0.12
CCDC78-213ENST00000482878 SHPRHQ149N8 1683 aa15.77■□□□□ 0.12
CCDC78-213ENST00000482878 IQSEC2Q5JU85 1478 aa15.77■□□□□ 0.12
CCDC78-213ENST00000482878 C14orf93Q9H972 538 aaKnown RBP15.77■□□□□ 0.11
CCDC78-213ENST00000482878 WDR63Q8IWG1 891 aa15.76■□□□□ 0.11
CCDC78-213ENST00000482878 IFT172Q9UG01 1749 aa15.76■□□□□ 0.11
CCDC78-213ENST00000482878 PPRC1Q5VV67 1664 aaKnown RBP15.76■□□□□ 0.11
CCDC78-213ENST00000482878 PMFBP1Q8TBY8 1022 aa15.76■□□□□ 0.11
CCDC78-213ENST00000482878 PANK2Q9BZ23 570 aa15.76■□□□□ 0.11
CCDC78-213ENST00000482878 KIF1BO60333 1816 aa15.75■□□□□ 0.11
CCDC78-213ENST00000482878 NLRP1Q9C000 1473 aa15.75■□□□□ 0.11
CCDC78-213ENST00000482878 CLCN1P35523 988 aa15.75■□□□□ 0.11
CCDC78-213ENST00000482878 BECN1Q14457 450 aa15.75■□□□□ 0.11
CCDC78-213ENST00000482878 ADGRB3O60242 1522 aa15.75■□□□□ 0.11
CCDC78-213ENST00000482878 PDZRN3Q9UPQ7 1066 aa15.74■□□□□ 0.11
CCDC78-213ENST00000482878 ZNF518AQ6AHZ1 1483 aa15.74■□□□□ 0.11
CCDC78-213ENST00000482878 SETBP1Q9Y6X0 1596 aa15.74■□□□□ 0.11
CCDC78-213ENST00000482878 XRCC6P12956 609 aaKnown RBP eCLIP15.73■□□□□ 0.11
CCDC78-213ENST00000482878 CCDC27Q2M243 656 aa15.73■□□□□ 0.11
CCDC78-213ENST00000482878 SPRYD3Q8NCJ5 442 aa15.73■□□□□ 0.11
CCDC78-213ENST00000482878 ADGRB1O14514 1584 aa15.72■□□□□ 0.11
CCDC78-213ENST00000482878 AAMPQ13685 434 aa15.72■□□□□ 0.11
CCDC78-213ENST00000482878 LMTK2Q8IWU2 1503 aa15.72■□□□□ 0.11
CCDC78-213ENST00000482878 NPATQ14207 1427 aa15.72■□□□□ 0.11
CCDC78-213ENST00000482878 CFAP53Q96M91 514 aa15.71■□□□□ 0.11
CCDC78-213ENST00000482878 TRIM44Q96DX7 344 aaPredicted RBP15.71■□□□□ 0.11
CCDC78-213ENST00000482878 U2AF1L5P0DN76 240 aaPredicted RBP15.7■□□□□ 0.1
CCDC78-213ENST00000482878 U2AF1Q01081 240 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCDC78-213ENST00000482878 VIRMAQ69YN4 1812 aaKnown RBP15.7■□□□□ 0.1
CCDC78-213ENST00000482878 KIDINS220Q9ULH0 1771 aa15.7■□□□□ 0.1
CCDC78-213ENST00000482878 TBC1D32Q96NH3 1257 aa15.69■□□□□ 0.1
CCDC78-213ENST00000482878 MYH16Q9H6N6 1097 aa15.69■□□□□ 0.1
CCDC78-213ENST00000482878 RWDD1Q9H446 243 aaPredicted RBP15.69■□□□□ 0.1
CCDC78-213ENST00000482878 QRICH2Q9H0J4 1663 aa15.69■□□□□ 0.1
CCDC78-213ENST00000482878 MVPQ14764 893 aaKnown RBP15.68■□□□□ 0.1
CCDC78-213ENST00000482878 ANTXR1Q9H6X2 564 aa15.68■□□□□ 0.1
CCDC78-213ENST00000482878 ASXL2Q76L83 1435 aa15.68■□□□□ 0.1
CCDC78-213ENST00000482878 RBM10P98175 930 aaKnown RBP15.68■□□□□ 0.1
CCDC78-213ENST00000482878 TSR2Q969E8 191 aaKnown RBP15.68■□□□□ 0.1
CCDC78-213ENST00000482878 UPF2Q9HAU5 1272 aaKnown RBP15.68■□□□□ 0.1
CCDC78-213ENST00000482878 ZC3H13Q5T200 1668 aaKnown RBP15.67■□□□□ 0.1
CCDC78-213ENST00000482878 TBC1D2Q9BYX2 928 aa15.67■□□□□ 0.1
CCDC78-213ENST00000482878 CABP2Q9NPB3 220 aa15.67■□□□□ 0.1
CCDC78-213ENST00000482878 ZMYM3Q14202 1370 aa15.66■□□□□ 0.1
CCDC78-213ENST00000482878 ANKRD36BQ8N2N9 1353 aa15.66■□□□□ 0.1
CCDC78-213ENST00000482878 ZKSCAN2Q63HK3 967 aa15.66■□□□□ 0.1
CCDC78-213ENST00000482878 ARID3AQ99856 593 aa15.66■□□□□ 0.1
CCDC78-213ENST00000482878 EVC2Q86UK5 1308 aa15.66■□□□□ 0.1
CCDC78-213ENST00000482878 FTSJ3Q8IY81 847 aaKnown RBP15.65■□□□□ 0.1
CCDC78-213ENST00000482878 DZIP1LQ8IYY4 767 aaKnown RBP15.65■□□□□ 0.1
CCDC78-213ENST00000482878 RPGRIP1LQ68CZ1 1315 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms