RNA–Protein interactions for RNA: ENST00000482871.5

MSL3-215, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-215ENST00000482871 DMRTA1Q5VZB9 504 aa11.93□□□□□ -0.5
MSL3-215ENST00000482871 TROQ12816 1431 aaPredicted RBP11.93□□□□□ -0.5
MSL3-215ENST00000482871 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
MSL3-215ENST00000482871 CFAP43Q8NDM7 1665 aa11.92□□□□□ -0.5
MSL3-215ENST00000482871 COL9A1P20849 921 aa11.92□□□□□ -0.5
MSL3-215ENST00000482871 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
MSL3-215ENST00000482871 KRTAP3-3Q9BYR6 98 aa11.92□□□□□ -0.5
MSL3-215ENST00000482871 KRTAP3-2Q9BYR7 98 aa11.92□□□□□ -0.5
MSL3-215ENST00000482871 MAP3K4Q9Y6R4 1608 aa11.91□□□□□ -0.5
MSL3-215ENST00000482871 PPP1R3GB7ZBB8 358 aa11.91□□□□□ -0.5
MSL3-215ENST00000482871 CD109Q6YHK3 1445 aa11.91□□□□□ -0.5
MSL3-215ENST00000482871 TIAM1Q13009 1591 aa11.91□□□□□ -0.5
MSL3-215ENST00000482871 KIF14Q15058 1648 aa11.9□□□□□ -0.5
MSL3-215ENST00000482871 ABCA9Q8IUA7 1624 aa11.9□□□□□ -0.5
MSL3-215ENST00000482871 LSM11P83369 360 aaKnown RBP eCLIP11.9□□□□□ -0.5
MSL3-215ENST00000482871 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
MSL3-215ENST00000482871 MAGI3Q5TCQ9 1506 aa11.9□□□□□ -0.5
MSL3-215ENST00000482871 MAP3K1Q13233 1512 aa11.89□□□□□ -0.51
MSL3-215ENST00000482871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.88□□□□□ -0.51
MSL3-215ENST00000482871 EHBP1L1Q8N3D4 1523 aa11.87□□□□□ -0.51
MSL3-215ENST00000482871 MYO5CQ9NQX4 1742 aa11.87□□□□□ -0.51
MSL3-215ENST00000482871 TTC37Q6PGP7 1564 aa11.87□□□□□ -0.51
MSL3-215ENST00000482871 FLIIQ13045 1269 aa11.86□□□□□ -0.51
MSL3-215ENST00000482871 KANK4Q5T7N3 995 aaPredicted RBP11.86□□□□□ -0.51
MSL3-215ENST00000482871 CERKQ8TCT0 537 aa11.86□□□□□ -0.51
MSL3-215ENST00000482871 DDRGK1Q96HY6 314 aa11.86□□□□□ -0.51
MSL3-215ENST00000482871 LRRC9Q6ZRR7 1453 aa11.86□□□□□ -0.51
MSL3-215ENST00000482871 TEX14Q8IWB6 1497 aa11.86□□□□□ -0.51
MSL3-215ENST00000482871 PPRC1Q5VV67 1664 aaKnown RBP11.86□□□□□ -0.51
MSL3-215ENST00000482871 SUPT6HQ7KZ85 1726 aaKnown RBP11.86□□□□□ -0.51
MSL3-215ENST00000482871 PROX2Q3B8N5 592 aa11.85□□□□□ -0.51
MSL3-215ENST00000482871 NPM2Q86SE8 214 aaKnown RBP11.85□□□□□ -0.51
MSL3-215ENST00000482871 ZBED2Q9BTP6 218 aa11.85□□□□□ -0.51
MSL3-215ENST00000482871 APBB1O00213 710 aa11.84□□□□□ -0.51
MSL3-215ENST00000482871 GPR37O15354 613 aa11.84□□□□□ -0.51
MSL3-215ENST00000482871 FCHSD2O94868 740 aa11.84□□□□□ -0.51
MSL3-215ENST00000482871 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
MSL3-215ENST00000482871 PLEKHG3A1L390 1219 aa11.83□□□□□ -0.52
MSL3-215ENST00000482871 PTGDRQ13258 359 aa11.83□□□□□ -0.52
MSL3-215ENST00000482871 ADGRD1Q6QNK2 874 aa11.83□□□□□ -0.52
MSL3-215ENST00000482871 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
MSL3-215ENST00000482871 CCNB3Q8WWL7 1395 aa11.82□□□□□ -0.52
MSL3-215ENST00000482871 EFCAB2Q5VUJ9 269 aa11.82□□□□□ -0.52
MSL3-215ENST00000482871 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
MSL3-215ENST00000482871 VPS9D1Q9Y2B5 631 aa11.82□□□□□ -0.52
MSL3-215ENST00000482871 PLCH2O75038 1416 aa11.82□□□□□ -0.52
MSL3-215ENST00000482871 CDC42BPBQ9Y5S2 1711 aa11.82□□□□□ -0.52
MSL3-215ENST00000482871 MINK1Q8N4C8 1332 aaPredicted RBP11.82□□□□□ -0.52
MSL3-215ENST00000482871 PRSS12P56730 875 aa11.81□□□□□ -0.52
MSL3-215ENST00000482871 NCOA2Q15596 1464 aa11.81□□□□□ -0.52
MSL3-215ENST00000482871 ARHGAP5Q13017 1502 aa11.81□□□□□ -0.52
MSL3-215ENST00000482871 TK2O00142 265 aa11.8□□□□□ -0.52
MSL3-215ENST00000482871 PADI6Q6TGC4 694 aa11.8□□□□□ -0.52
MSL3-215ENST00000482871 PPARGC1BQ86YN6 1023 aaKnown RBP11.8□□□□□ -0.52
MSL3-215ENST00000482871 FANCAO15360 1455 aa11.8□□□□□ -0.52
MSL3-215ENST00000482871 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
MSL3-215ENST00000482871 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
MSL3-215ENST00000482871 PREX2Q70Z35 1606 aa11.79□□□□□ -0.52
MSL3-215ENST00000482871 ITSN2Q9NZM3 1697 aa11.79□□□□□ -0.52
MSL3-215ENST00000482871 NEO1Q92859 1461 aa11.79□□□□□ -0.52
MSL3-215ENST00000482871 TRIM6-TRIM34B2RNG4 842 aa11.79□□□□□ -0.52
MSL3-215ENST00000482871 STAC3Q96MF2 364 aa11.79□□□□□ -0.52
MSL3-215ENST00000482871 SLC4A5Q9BY07 1137 aa11.79□□□□□ -0.52
MSL3-215ENST00000482871 CFDP1Q9UEE9 299 aaPredicted RBP11.79□□□□□ -0.52
MSL3-215ENST00000482871 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
MSL3-215ENST00000482871 ARAP3Q8WWN8 1544 aa11.79□□□□□ -0.52
MSL3-215ENST00000482871 GPATCH8Q9UKJ3 1502 aaKnown RBP11.79□□□□□ -0.52
MSL3-215ENST00000482871 HIC1Q14526 733 aa11.78□□□□□ -0.52
MSL3-215ENST00000482871 TSKSQ9UJT2 592 aa11.78□□□□□ -0.52
MSL3-215ENST00000482871 KDM6BO15054 1643 aa11.78□□□□□ -0.52
MSL3-215ENST00000482871 AKNAQ7Z591 1439 aa11.77□□□□□ -0.52
MSL3-215ENST00000482871 MAP2K5Q13163 448 aa11.77□□□□□ -0.53
MSL3-215ENST00000482871 AMHR2Q16671 573 aa11.77□□□□□ -0.53
MSL3-215ENST00000482871 KIAA1468Q9P260 1216 aa11.77□□□□□ -0.53
MSL3-215ENST00000482871 GNPATO15228 680 aa11.76□□□□□ -0.53
MSL3-215ENST00000482871 PACS2Q86VP3 889 aa11.76□□□□□ -0.53
MSL3-215ENST00000482871 CCDC102AQ96A19 550 aa11.76□□□□□ -0.53
MSL3-215ENST00000482871 PDIA4P13667 645 aaKnown RBP11.75□□□□□ -0.53
MSL3-215ENST00000482871 RBM27Q9P2N5 1060 aaKnown RBP11.75□□□□□ -0.53
MSL3-215ENST00000482871 RABGEF1Q9UJ41 708 aa11.75□□□□□ -0.53
MSL3-215ENST00000482871 ADGRL1O94910 1474 aa11.75□□□□□ -0.53
MSL3-215ENST00000482871 PARP9Q8IXQ6 854 aa11.74□□□□□ -0.53
MSL3-215ENST00000482871 GOPCQ9HD26 462 aa11.74□□□□□ -0.53
MSL3-215ENST00000482871 FAM198AQ9UFP1 575 aa11.74□□□□□ -0.53
MSL3-215ENST00000482871 IRF6O14896 467 aa11.73□□□□□ -0.53
MSL3-215ENST00000482871 ONECUT3O60422 494 aaPredicted RBP11.73□□□□□ -0.53
MSL3-215ENST00000482871 RAPGEF3O95398 923 aa11.73□□□□□ -0.53
MSL3-215ENST00000482871 FECHP22830 423 aa11.73□□□□□ -0.53
MSL3-215ENST00000482871 SCAPERQ9BY12 1400 aa11.73□□□□□ -0.53
MSL3-215ENST00000482871 NBPF3Q9H094 633 aa11.73□□□□□ -0.53
MSL3-215ENST00000482871 COL17A1Q9UMD9 1497 aaPredicted RBP11.73□□□□□ -0.53
MSL3-215ENST00000482871 DENND4BO75064 1496 aaPredicted RBP11.72□□□□□ -0.53
MSL3-215ENST00000482871 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
MSL3-215ENST00000482871 ZBTB7CA1YPR0 619 aa11.72□□□□□ -0.53
MSL3-215ENST00000482871 A6NJR5 290 aa11.72□□□□□ -0.53
MSL3-215ENST00000482871 HRO43593 1189 aa11.72□□□□□ -0.53
MSL3-215ENST00000482871 SEPT9Q9UHD8 586 aaPredicted RBP11.72□□□□□ -0.53
MSL3-215ENST00000482871 PNMA3Q9UL41 463 aa11.72□□□□□ -0.53
MSL3-215ENST00000482871 SAMD9LQ8IVG5 1584 aa11.71□□□□□ -0.53
MSL3-215ENST00000482871 ZNF644Q9H582 1327 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms