RNA–Protein interactions for RNA: ENST00000482788.1

SATB1-214, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 406 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-214ENST00000482788 IL21Q9HBE4 155 aa9.68□□□□□ -0.86
SATB1-214ENST00000482788 FDX1P10109 184 aa9.67□□□□□ -0.86
SATB1-214ENST00000482788 GUCA2AQ02747 115 aa9.67□□□□□ -0.86
SATB1-214ENST00000482788 TJAP1Q5JTD0 557 aa9.67□□□□□ -0.86
SATB1-214ENST00000482788 RSBN1LQ6PCB5 846 aaPredicted RBP9.67□□□□□ -0.86
SATB1-214ENST00000482788 SLC27A5Q9Y2P5 690 aa9.67□□□□□ -0.86
SATB1-214ENST00000482788 GJA5P36382 358 aa9.66□□□□□ -0.86
SATB1-214ENST00000482788 CLK2P49760 499 aaKnown RBP9.66□□□□□ -0.86
SATB1-214ENST00000482788 RIC3Q7Z5B4 369 aa9.66□□□□□ -0.86
SATB1-214ENST00000482788 SCUBE3Q8IX30 993 aa9.66□□□□□ -0.86
SATB1-214ENST00000482788 POLR3EQ9NVU0 708 aa9.66□□□□□ -0.86
SATB1-214ENST00000482788 SPTLC1O15269 473 aa9.65□□□□□ -0.86
SATB1-214ENST00000482788 SKIV2LQ15477 1246 aaKnown RBP9.65□□□□□ -0.86
SATB1-214ENST00000482788 ZPR1O75312 459 aa9.64□□□□□ -0.87
SATB1-214ENST00000482788 ITGBL1O95965 494 aaPredicted RBP9.64□□□□□ -0.87
SATB1-214ENST00000482788 Q3C1V9 767 aa9.64□□□□□ -0.87
SATB1-214ENST00000482788 GOPCQ9HD26 462 aa9.64□□□□□ -0.87
SATB1-214ENST00000482788 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
SATB1-214ENST00000482788 ATP1B4Q9UN42 357 aaPredicted RBP9.64□□□□□ -0.87
SATB1-214ENST00000482788 KCNC4Q03721 635 aa9.63□□□□□ -0.87
SATB1-214ENST00000482788 ZNF516Q92618 1163 aa9.63□□□□□ -0.87
SATB1-214ENST00000482788 PCDHGC3Q9UN70 934 aa9.63□□□□□ -0.87
SATB1-214ENST00000482788 CSPP1Q1MSJ5 1256 aa9.62□□□□□ -0.87
SATB1-214ENST00000482788 TOP2AP11388 1531 aaKnown RBP9.61□□□□□ -0.87
SATB1-214ENST00000482788 FMNL1O95466 1100 aaPredicted RBP9.61□□□□□ -0.87
SATB1-214ENST00000482788 TMEM132AQ24JP5 1023 aa9.61□□□□□ -0.87
SATB1-214ENST00000482788 TUSC1Q2TAM9 212 aa9.61□□□□□ -0.87
SATB1-214ENST00000482788 PCMTD1Q96MG8 357 aaPredicted RBP9.61□□□□□ -0.87
SATB1-214ENST00000482788 SALL2Q9Y467 1007 aaPredicted RBP9.61□□□□□ -0.87
SATB1-214ENST00000482788 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
SATB1-214ENST00000482788 C6orf229H3BNL8 230 aa9.6□□□□□ -0.87
SATB1-214ENST00000482788 TLL1O43897 1013 aa9.6□□□□□ -0.87
SATB1-214ENST00000482788 RNF19BQ6ZMZ0 732 aa9.6□□□□□ -0.87
SATB1-214ENST00000482788 BRICD5Q6PL45 260 aa9.59□□□□□ -0.87
SATB1-214ENST00000482788 PROCA1Q8NCQ7 364 aaPredicted RBP9.59□□□□□ -0.87
SATB1-214ENST00000482788 THAP11Q96EK4 314 aa9.59□□□□□ -0.87
SATB1-214ENST00000482788 SPSB2Q99619 263 aa9.59□□□□□ -0.87
SATB1-214ENST00000482788 ADH1BP00325 375 aa9.58□□□□□ -0.88
SATB1-214ENST00000482788 MTMR2Q13614 643 aa9.58□□□□□ -0.88
SATB1-214ENST00000482788 PRPF38BQ5VTL8 546 aaKnown RBP9.58□□□□□ -0.88
SATB1-214ENST00000482788 SYMPKQ92797 1274 aaKnown RBP9.58□□□□□ -0.88
SATB1-214ENST00000482788 ZBTB3Q9H5J0 574 aa9.58□□□□□ -0.88
SATB1-214ENST00000482788 PLA2G2EQ9NZK7 142 aa9.58□□□□□ -0.88
SATB1-214ENST00000482788 NESP48681 1621 aa9.57□□□□□ -0.88
SATB1-214ENST00000482788 NKX2-3Q8TAU0 364 aa9.57□□□□□ -0.88
SATB1-214ENST00000482788 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.57□□□□□ -0.88
SATB1-214ENST00000482788 SPDYE5A6NIY4 337 aa9.56□□□□□ -0.88
SATB1-214ENST00000482788 NUTM2BA6NNL0 878 aaPredicted RBP9.56□□□□□ -0.88
SATB1-214ENST00000482788 NUTM2EB1AL46 878 aaPredicted RBP9.56□□□□□ -0.88
SATB1-214ENST00000482788 SUPT5HO00267 1087 aaKnown RBP9.56□□□□□ -0.88
SATB1-214ENST00000482788 HRCP23327 699 aa9.56□□□□□ -0.88
SATB1-214ENST00000482788 QPCTQ16769 361 aa9.56□□□□□ -0.88
SATB1-214ENST00000482788 NUTM2DQ5VT03 806 aaPredicted RBP9.56□□□□□ -0.88
SATB1-214ENST00000482788 RETREG3Q86VR2 466 aa9.56□□□□□ -0.88
SATB1-214ENST00000482788 NUTM2AQ8IVF1 878 aaPredicted RBP9.56□□□□□ -0.88
SATB1-214ENST00000482788 CABLES1Q8TDN4 633 aa9.56□□□□□ -0.88
SATB1-214ENST00000482788 USB1Q9BQ65 265 aaKnown RBP9.56□□□□□ -0.88
SATB1-214ENST00000482788 LILRB3O75022 631 aa9.55□□□□□ -0.88
SATB1-214ENST00000482788 ERCC6Q03468 1493 aa9.54□□□□□ -0.88
SATB1-214ENST00000482788 IFFO2Q5TF58 517 aa9.54□□□□□ -0.88
SATB1-214ENST00000482788 MSS51Q4VC12 460 aa9.53□□□□□ -0.88
SATB1-214ENST00000482788 FAM160A2Q8N612 972 aaPredicted RBP9.53□□□□□ -0.88
SATB1-214ENST00000482788 SLC6A16Q9GZN6 736 aa9.53□□□□□ -0.88
SATB1-214ENST00000482788 PRR7Q8TB68 274 aa9.52□□□□□ -0.89
SATB1-214ENST00000482788 LAMC3Q9Y6N6 1575 aa9.52□□□□□ -0.89
SATB1-214ENST00000482788 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
SATB1-214ENST00000482788 PPP2R2DQ66LE6 453 aa9.51□□□□□ -0.89
SATB1-214ENST00000482788 CFAP99D6REC4 459 aa9.5□□□□□ -0.89
SATB1-214ENST00000482788 S1PR4O95977 384 aa9.5□□□□□ -0.89
SATB1-214ENST00000482788 GGCXP38435 758 aa9.5□□□□□ -0.89
SATB1-214ENST00000482788 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
SATB1-214ENST00000482788 PRDM9Q9NQV7 894 aa9.5□□□□□ -0.89
SATB1-214ENST00000482788 TSC1Q92574 1164 aa9.49□□□□□ -0.89
SATB1-214ENST00000482788 CADPSQ9ULU8 1353 aa9.49□□□□□ -0.89
SATB1-214ENST00000482788 CCDC88BA6NC98 1476 aa9.48□□□□□ -0.89
SATB1-214ENST00000482788 JUNDP17535 347 aa9.48□□□□□ -0.89
SATB1-214ENST00000482788 RFC5P40937 340 aa9.48□□□□□ -0.89
SATB1-214ENST00000482788 HELBQ8NG08 1087 aaPredicted RBP9.48□□□□□ -0.89
SATB1-214ENST00000482788 DXOO77932 396 aaKnown RBP9.47□□□□□ -0.89
SATB1-214ENST00000482788 MMP16P51512 607 aa9.47□□□□□ -0.89
SATB1-214ENST00000482788 DESI1Q6ICB0 168 aa9.47□□□□□ -0.89
SATB1-214ENST00000482788 PPP1R18Q6NYC8 613 aa9.47□□□□□ -0.89
SATB1-214ENST00000482788 KIF21AQ7Z4S6 1674 aa9.47□□□□□ -0.89
SATB1-214ENST00000482788 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.46□□□□□ -0.9
SATB1-214ENST00000482788 PDS5BQ9NTI5 1447 aa9.46□□□□□ -0.9
SATB1-214ENST00000482788 A0A0G2JS52 829 aa9.45□□□□□ -0.9
SATB1-214ENST00000482788 RNF223E7ERA6 249 aa9.44□□□□□ -0.9
SATB1-214ENST00000482788 AP1G2O75843 785 aa9.44□□□□□ -0.9
SATB1-214ENST00000482788 CFTRP13569 1480 aa9.43□□□□□ -0.9
SATB1-214ENST00000482788 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
SATB1-214ENST00000482788 PTPRNQ16849 979 aa9.43□□□□□ -0.9
SATB1-214ENST00000482788 TMEM259Q4ZIN3 620 aa9.43□□□□□ -0.9
SATB1-214ENST00000482788 ANKLE1Q8NAG6 615 aa9.42□□□□□ -0.9
SATB1-214ENST00000482788 FCF1Q9Y324 198 aaKnown RBP9.42□□□□□ -0.9
SATB1-214ENST00000482788 FANCD2Q9BXW9 1451 aa9.41□□□□□ -0.9
SATB1-214ENST00000482788 CEP164Q9UPV0 1460 aa9.41□□□□□ -0.9
SATB1-214ENST00000482788 CTDSPL2Q05D32 466 aa9.41□□□□□ -0.9
SATB1-214ENST00000482788 LYPD8Q6UX82 237 aa9.41□□□□□ -0.9
SATB1-214ENST00000482788 NUDT12Q9BQG2 462 aa9.41□□□□□ -0.9
SATB1-214ENST00000482788 THOC2Q8NI27 1593 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms