RNA–Protein interactions for RNA: ENST00000482788.1

SATB1-214, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 406 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-214ENST00000482788 AEBP2Q6ZN18 517 aaPredicted RBP23.49■■□□□ 1.35
SATB1-214ENST00000482788 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
SATB1-214ENST00000482788 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
SATB1-214ENST00000482788 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
SATB1-214ENST00000482788 PLPPR3Q6T4P5 718 aa18.75■□□□□ 0.59
SATB1-214ENST00000482788 FOXD1Q16676 465 aa18.5■□□□□ 0.55
SATB1-214ENST00000482788 ADRA2BP18089 450 aa17.84■□□□□ 0.45
SATB1-214ENST00000482788 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
SATB1-214ENST00000482788 PIAS4Q8N2W9 510 aaPredicted RBP17.49■□□□□ 0.39
SATB1-214ENST00000482788 MSH5O43196 834 aa17.06■□□□□ 0.32
SATB1-214ENST00000482788 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
SATB1-214ENST00000482788 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
SATB1-214ENST00000482788 KCNA4P22459 653 aa16.2■□□□□ 0.18
SATB1-214ENST00000482788 MAPK8IP2Q13387 824 aaPredicted RBP16.16■□□□□ 0.18
SATB1-214ENST00000482788 NCBP3Q53F19 620 aaKnown RBP16.13■□□□□ 0.17
SATB1-214ENST00000482788 CNKSR2Q8WXI2 1034 aa16.05■□□□□ 0.16
SATB1-214ENST00000482788 DMRT2Q9Y5R5 561 aa15.94■□□□□ 0.14
SATB1-214ENST00000482788 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
SATB1-214ENST00000482788 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
SATB1-214ENST00000482788 HOXD11P31277 338 aaPredicted RBP15.62■□□□□ 0.09
SATB1-214ENST00000482788 SLC4A1APQ9BWU0 796 aaKnown RBP15.46■□□□□ 0.07
SATB1-214ENST00000482788 POTEDQ86YR6 584 aa15.4■□□□□ 0.06
SATB1-214ENST00000482788 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
SATB1-214ENST00000482788 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
SATB1-214ENST00000482788 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
SATB1-214ENST00000482788 SLC4A2P04920 1241 aa14.95□□□□□ -0.02
SATB1-214ENST00000482788 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.92□□□□□ -0.02
SATB1-214ENST00000482788 FOXD4L1Q9NU39 408 aa14.9□□□□□ -0.02
SATB1-214ENST00000482788 ZBTB22O15209 634 aa14.89□□□□□ -0.03
SATB1-214ENST00000482788 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
SATB1-214ENST00000482788 MYCNP04198 464 aaPredicted RBP14.68□□□□□ -0.06
SATB1-214ENST00000482788 U3KPZ7 1027 aaPredicted RBP14.67□□□□□ -0.06
SATB1-214ENST00000482788 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
SATB1-214ENST00000482788 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
SATB1-214ENST00000482788 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
SATB1-214ENST00000482788 SAMD1Q6SPF0 538 aaPredicted RBP14.47□□□□□ -0.09
SATB1-214ENST00000482788 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
SATB1-214ENST00000482788 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
SATB1-214ENST00000482788 APLP2Q06481 763 aa14.38□□□□□ -0.11
SATB1-214ENST00000482788 ATF5Q9Y2D1 282 aaPredicted RBP14.25□□□□□ -0.13
SATB1-214ENST00000482788 SPINK5Q9NQ38 1064 aaPredicted RBP14.24□□□□□ -0.13
SATB1-214ENST00000482788 CAPN15O75808 1086 aa14.2□□□□□ -0.14
SATB1-214ENST00000482788 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
SATB1-214ENST00000482788 TRHP20396 242 aaPredicted RBP14.15□□□□□ -0.14
SATB1-214ENST00000482788 ZNF219Q9P2Y4 722 aaPredicted RBP14.15□□□□□ -0.14
SATB1-214ENST00000482788 ABCB7O75027 752 aa13.93□□□□□ -0.18
SATB1-214ENST00000482788 DSG3P32926 999 aa13.92□□□□□ -0.18
SATB1-214ENST00000482788 POLA2Q14181 598 aa13.92□□□□□ -0.18
SATB1-214ENST00000482788 ZBTB12Q9Y330 459 aaPredicted RBP13.72□□□□□ -0.21
SATB1-214ENST00000482788 FBLN2P98095 1184 aa13.7□□□□□ -0.22
SATB1-214ENST00000482788 MKRN4PQ13434 485 aaPredicted RBP13.64□□□□□ -0.23
SATB1-214ENST00000482788 FKBP8Q14318 412 aa13.46□□□□□ -0.25
SATB1-214ENST00000482788 OSCARQ8IYS5 282 aa13.45□□□□□ -0.26
SATB1-214ENST00000482788 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
SATB1-214ENST00000482788 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
SATB1-214ENST00000482788 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
SATB1-214ENST00000482788 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
SATB1-214ENST00000482788 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
SATB1-214ENST00000482788 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
SATB1-214ENST00000482788 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
SATB1-214ENST00000482788 PROM2Q8N271 834 aa13.15□□□□□ -0.3
SATB1-214ENST00000482788 AKT1S1Q96B36 256 aa13.13□□□□□ -0.31
SATB1-214ENST00000482788 PABPN1Q86U42 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
SATB1-214ENST00000482788 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
SATB1-214ENST00000482788 FBXO3Q9UK99 471 aa12.98□□□□□ -0.33
SATB1-214ENST00000482788 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
SATB1-214ENST00000482788 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
SATB1-214ENST00000482788 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
SATB1-214ENST00000482788 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
SATB1-214ENST00000482788 VASPP50552 380 aaPredicted RBP12.79□□□□□ -0.36
SATB1-214ENST00000482788 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
SATB1-214ENST00000482788 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
SATB1-214ENST00000482788 MIER1Q8N108 512 aa12.7□□□□□ -0.38
SATB1-214ENST00000482788 NISCHQ9Y2I1 1504 aa12.7□□□□□ -0.38
SATB1-214ENST00000482788 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
SATB1-214ENST00000482788 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
SATB1-214ENST00000482788 IFNLR1Q8IU57 520 aaPredicted RBP12.6□□□□□ -0.39
SATB1-214ENST00000482788 CREBZFQ9NS37 354 aa12.6□□□□□ -0.39
SATB1-214ENST00000482788 FXR2P51116 673 aaKnown RBP eCLIP12.59□□□□□ -0.39
SATB1-214ENST00000482788 KLHL34Q8N239 644 aa12.58□□□□□ -0.4
SATB1-214ENST00000482788 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
SATB1-214ENST00000482788 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
SATB1-214ENST00000482788 PRKAR2AP13861 404 aaKnown RBP12.54□□□□□ -0.4
SATB1-214ENST00000482788 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
SATB1-214ENST00000482788 MNX1P50219 401 aaPredicted RBP12.47□□□□□ -0.41
SATB1-214ENST00000482788 SPOCK2Q92563 424 aa12.46□□□□□ -0.41
SATB1-214ENST00000482788 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
SATB1-214ENST00000482788 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
SATB1-214ENST00000482788 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
SATB1-214ENST00000482788 NUBP1P53384 320 aa12.34□□□□□ -0.43
SATB1-214ENST00000482788 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
SATB1-214ENST00000482788 RASEFQ8IZ41 740 aa12.28□□□□□ -0.44
SATB1-214ENST00000482788 FAM212AQ96EL1 285 aa12.28□□□□□ -0.44
SATB1-214ENST00000482788 CIZ1Q9ULV3 898 aaPredicted RBP12.27□□□□□ -0.45
SATB1-214ENST00000482788 GSE1Q14687 1217 aa12.25□□□□□ -0.45
SATB1-214ENST00000482788 DCAF8Q5TAQ9 597 aa12.25□□□□□ -0.45
SATB1-214ENST00000482788 POTEHQ6S545 545 aa12.23□□□□□ -0.45
SATB1-214ENST00000482788 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
SATB1-214ENST00000482788 TSPYL2Q9H2G4 693 aaPredicted RBP12.21□□□□□ -0.45
SATB1-214ENST00000482788 PKD2Q13563 968 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms