RNA–Protein interactions for RNA: ENST00000482116.1

LMO7-210, Transcript of LIM domain 7, humanhuman

TSL 3

Gene LMO7, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-210ENST00000482116 PBRM1Q86U86 1689 aa11.63□□□□□ -0.55
LMO7-210ENST00000482116 BLOC1S3Q6QNY0 202 aa11.63□□□□□ -0.55
LMO7-210ENST00000482116 CCDC102AQ96A19 550 aa11.63□□□□□ -0.55
LMO7-210ENST00000482116 SYNJ2O15056 1496 aa11.62□□□□□ -0.55
LMO7-210ENST00000482116 SYNJ1O43426 1573 aa11.62□□□□□ -0.55
LMO7-210ENST00000482116 ZPR1O75312 459 aa11.61□□□□□ -0.55
LMO7-210ENST00000482116 GAPVD1Q14C86 1478 aa11.61□□□□□ -0.55
LMO7-210ENST00000482116 NR1I2O75469 434 aa11.6□□□□□ -0.55
LMO7-210ENST00000482116 GGCXP38435 758 aa11.59□□□□□ -0.55
LMO7-210ENST00000482116 MDM2Q00987 491 aaPredicted RBP11.59□□□□□ -0.55
LMO7-210ENST00000482116 ZC3H15Q8WU90 426 aaKnown RBP11.59□□□□□ -0.55
LMO7-210ENST00000482116 ABCA5Q8WWZ7 1642 aa11.59□□□□□ -0.55
LMO7-210ENST00000482116 NKX2-3Q8TAU0 364 aa11.58□□□□□ -0.56
LMO7-210ENST00000482116 ABCA10Q8WWZ4 1543 aa11.58□□□□□ -0.56
LMO7-210ENST00000482116 BARGINQ6ZT62 677 aa11.57□□□□□ -0.56
LMO7-210ENST00000482116 ZMYND10O75800 440 aa11.56□□□□□ -0.56
LMO7-210ENST00000482116 PPP1R18Q6NYC8 613 aa11.56□□□□□ -0.56
LMO7-210ENST00000482116 ERCC6L2Q5T890 1561 aa11.55□□□□□ -0.56
LMO7-210ENST00000482116 CLCN1P35523 988 aa11.55□□□□□ -0.56
LMO7-210ENST00000482116 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.55□□□□□ -0.56
LMO7-210ENST00000482116 GCGRP47871 477 aa11.54□□□□□ -0.56
LMO7-210ENST00000482116 PUS10Q3MIT2 529 aaKnown RBP11.54□□□□□ -0.56
LMO7-210ENST00000482116 GPCPD1Q9NPB8 672 aa11.53□□□□□ -0.56
LMO7-210ENST00000482116 TLL1O43897 1013 aa11.52□□□□□ -0.57
LMO7-210ENST00000482116 ATP6V1AP38606 617 aa11.52□□□□□ -0.57
LMO7-210ENST00000482116 FUT2Q10981 343 aa11.52□□□□□ -0.57
LMO7-210ENST00000482116 GRIPAP1Q4V328 841 aa11.52□□□□□ -0.57
LMO7-210ENST00000482116 BIVM-ERCC5R4GMW8 1640 aa11.51□□□□□ -0.57
LMO7-210ENST00000482116 SCUBE3Q8IX30 993 aa11.51□□□□□ -0.57
LMO7-210ENST00000482116 BCANQ96GW7 911 aa11.51□□□□□ -0.57
LMO7-210ENST00000482116 WRNQ14191 1432 aaPredicted RBP eCLIP11.51□□□□□ -0.57
LMO7-210ENST00000482116 GRIN2AQ12879 1464 aa11.51□□□□□ -0.57
LMO7-210ENST00000482116 CEP170Q5SW79 1584 aa11.5□□□□□ -0.57
LMO7-210ENST00000482116 TOP2BQ02880 1626 aa11.5□□□□□ -0.57
LMO7-210ENST00000482116 TMUB1Q9BVT8 246 aa11.5□□□□□ -0.57
LMO7-210ENST00000482116 ADAMTS12P58397 1594 aa11.5□□□□□ -0.57
LMO7-210ENST00000482116 ADH1BP00325 375 aa11.49□□□□□ -0.57
LMO7-210ENST00000482116 CD46P15529 392 aa11.49□□□□□ -0.57
LMO7-210ENST00000482116 TTLL12Q14166 644 aaPredicted RBP11.49□□□□□ -0.57
LMO7-210ENST00000482116 MORN1Q5T089 497 aa11.48□□□□□ -0.57
LMO7-210ENST00000482116 NUP160Q12769 1436 aa11.47□□□□□ -0.57
LMO7-210ENST00000482116 KDM4AO75164 1064 aa11.46□□□□□ -0.57
LMO7-210ENST00000482116 SPSB2Q99619 263 aa11.46□□□□□ -0.57
LMO7-210ENST00000482116 IRX2Q9BZI1 471 aaPredicted RBP11.46□□□□□ -0.57
LMO7-210ENST00000482116 PRKD2Q9BZL6 878 aa11.46□□□□□ -0.57
LMO7-210ENST00000482116 FAM217BQ9NTX9 383 aaPredicted RBP11.46□□□□□ -0.57
LMO7-210ENST00000482116 SLC6A16Q9GZN6 736 aa11.45□□□□□ -0.58
LMO7-210ENST00000482116 FHAD1B1AJZ9 1412 aa11.44□□□□□ -0.58
LMO7-210ENST00000482116 FMNL1O95466 1100 aaPredicted RBP11.44□□□□□ -0.58
LMO7-210ENST00000482116 S1PR4O95977 384 aa11.44□□□□□ -0.58
LMO7-210ENST00000482116 SLC27A5Q9Y2P5 690 aa11.44□□□□□ -0.58
LMO7-210ENST00000482116 SHROOM2Q13796 1616 aa11.44□□□□□ -0.58
LMO7-210ENST00000482116 USP46P62068 366 aa11.43□□□□□ -0.58
LMO7-210ENST00000482116 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
LMO7-210ENST00000482116 AK7Q96M32 723 aa11.43□□□□□ -0.58
LMO7-210ENST00000482116 ERICH3Q5RHP9 1530 aa11.42□□□□□ -0.58
LMO7-210ENST00000482116 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
LMO7-210ENST00000482116 AMHR2Q16671 573 aa11.42□□□□□ -0.58
LMO7-210ENST00000482116 V9GY48 417 aaPredicted RBP11.42□□□□□ -0.58
LMO7-210ENST00000482116 SSTR3P32745 418 aaPredicted RBP11.41□□□□□ -0.58
LMO7-210ENST00000482116 Q3C1V9 767 aa11.41□□□□□ -0.58
LMO7-210ENST00000482116 ANKLE1Q8NAG6 615 aa11.39□□□□□ -0.59
LMO7-210ENST00000482116 REPIN1Q9BWE0 567 aaKnown RBP11.39□□□□□ -0.59
LMO7-210ENST00000482116 PRG4Q92954 1404 aaPredicted RBP11.38□□□□□ -0.59
LMO7-210ENST00000482116 PPEF1O14829 653 aaPredicted RBP11.38□□□□□ -0.59
LMO7-210ENST00000482116 TRIM66O15016 1216 aa11.38□□□□□ -0.59
LMO7-210ENST00000482116 GIGYF2Q6Y7W6 1299 aaKnown RBP11.38□□□□□ -0.59
LMO7-210ENST00000482116 SALL2Q9Y467 1007 aaPredicted RBP11.38□□□□□ -0.59
LMO7-210ENST00000482116 THAP11Q96EK4 314 aa11.37□□□□□ -0.59
LMO7-210ENST00000482116 HOXA2O43364 376 aa11.36□□□□□ -0.59
LMO7-210ENST00000482116 BRICD5Q6PL45 260 aa11.36□□□□□ -0.59
LMO7-210ENST00000482116 KIF13AQ9H1H9 1805 aa11.35□□□□□ -0.59
LMO7-210ENST00000482116 SLC19A1P41440 591 aa11.35□□□□□ -0.59
LMO7-210ENST00000482116 SLC24A3Q9HC58 644 aa11.35□□□□□ -0.59
LMO7-210ENST00000482116 RNF19BQ6ZMZ0 732 aa11.34□□□□□ -0.59
LMO7-210ENST00000482116 RUSC2Q8N2Y8 1516 aa11.34□□□□□ -0.59
LMO7-210ENST00000482116 PARP9Q8IXQ6 854 aa11.33□□□□□ -0.6
LMO7-210ENST00000482116 FAM160A2Q8N612 972 aaPredicted RBP11.32□□□□□ -0.6
LMO7-210ENST00000482116 HLA-CQ95604 372 aa11.32□□□□□ -0.6
LMO7-210ENST00000482116 IGF1RP08069 1367 aa11.31□□□□□ -0.6
LMO7-210ENST00000482116 LAPTM4AQ15012 233 aa11.31□□□□□ -0.6
LMO7-210ENST00000482116 MSS51Q4VC12 460 aa11.31□□□□□ -0.6
LMO7-210ENST00000482116 USB1Q9BQ65 265 aaKnown RBP11.31□□□□□ -0.6
LMO7-210ENST00000482116 BEGAINQ9BUH8 593 aa11.31□□□□□ -0.6
LMO7-210ENST00000482116 GFRA3O60609 400 aa11.3□□□□□ -0.6
LMO7-210ENST00000482116 PDE4DQ08499 809 aa11.3□□□□□ -0.6
LMO7-210ENST00000482116 GUCA2AQ02747 115 aa11.29□□□□□ -0.6
LMO7-210ENST00000482116 SPIRE2Q8WWL2 714 aa11.29□□□□□ -0.6
LMO7-210ENST00000482116 PRDM9Q9NQV7 894 aa11.29□□□□□ -0.6
LMO7-210ENST00000482116 FCF1Q9Y324 198 aaKnown RBP11.29□□□□□ -0.6
LMO7-210ENST00000482116 FDX1P10109 184 aa11.28□□□□□ -0.6
LMO7-210ENST00000482116 DIXDC1Q155Q3 683 aa11.28□□□□□ -0.6
LMO7-210ENST00000482116 ADCY10Q96PN6 1610 aa11.27□□□□□ -0.6
LMO7-210ENST00000482116 FAM69CQ0P6D2 419 aa11.27□□□□□ -0.61
LMO7-210ENST00000482116 KIAA0586Q9BVV6 1533 aa11.26□□□□□ -0.61
LMO7-210ENST00000482116 SPRYD7Q5W111 196 aa11.26□□□□□ -0.61
LMO7-210ENST00000482116 Q6ZNB5 142 aa11.26□□□□□ -0.61
LMO7-210ENST00000482116 LIAT1Q6ZQX7 453 aa11.26□□□□□ -0.61
LMO7-210ENST00000482116 PDZRN3Q9UPQ7 1066 aa11.26□□□□□ -0.61
LMO7-210ENST00000482116 KIF27Q86VH2 1401 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms