RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 PRAM1Q96QH2 718 aa15.84■□□□□ 0.13
GGPS1-205ENST00000482013 CPS1P31327 1500 aa15.84■□□□□ 0.13
GGPS1-205ENST00000482013 DIP2AQ14689 1571 aa15.83■□□□□ 0.13
GGPS1-205ENST00000482013 ZNF142P52746 1687 aaPredicted RBP15.83■□□□□ 0.13
GGPS1-205ENST00000482013 TXNDC2Q86VQ3 553 aa15.83■□□□□ 0.12
GGPS1-205ENST00000482013 PNISRQ8TF01 805 aaKnown RBP15.83■□□□□ 0.12
GGPS1-205ENST00000482013 INSRP06213 1382 aa15.83■□□□□ 0.12
GGPS1-205ENST00000482013 ADAMTS13Q76LX8 1427 aa15.83■□□□□ 0.12
GGPS1-205ENST00000482013 CEP170BQ9Y4F5 1589 aaPredicted RBP15.83■□□□□ 0.12
GGPS1-205ENST00000482013 LTKP29376 864 aa15.82■□□□□ 0.12
GGPS1-205ENST00000482013 CC2D1BQ5T0F9 858 aaKnown RBP15.82■□□□□ 0.12
GGPS1-205ENST00000482013 FAM9BQ8IZU0 186 aa15.82■□□□□ 0.12
GGPS1-205ENST00000482013 METP08581 1390 aa15.82■□□□□ 0.12
GGPS1-205ENST00000482013 TBX22Q9Y458 520 aa15.81■□□□□ 0.12
GGPS1-205ENST00000482013 ANKRD36BQ8N2N9 1353 aa15.8■□□□□ 0.12
GGPS1-205ENST00000482013 HNRNPUQ00839 825 aaKnown RBP eCLIP15.8■□□□□ 0.12
GGPS1-205ENST00000482013 BCANQ96GW7 911 aa15.79■□□□□ 0.12
GGPS1-205ENST00000482013 CARD14Q9BXL6 1004 aa15.79■□□□□ 0.12
GGPS1-205ENST00000482013 NSD2O96028 1365 aa15.78■□□□□ 0.12
GGPS1-205ENST00000482013 MINK1Q8N4C8 1332 aaPredicted RBP15.78■□□□□ 0.12
GGPS1-205ENST00000482013 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
GGPS1-205ENST00000482013 SLC12A5Q9H2X9 1139 aa15.78■□□□□ 0.12
GGPS1-205ENST00000482013 SRPK2P78362 688 aaKnown RBP15.77■□□□□ 0.12
GGPS1-205ENST00000482013 CABP2Q9NPB3 220 aa15.77■□□□□ 0.12
GGPS1-205ENST00000482013 PIK3R4Q99570 1358 aa15.76■□□□□ 0.11
GGPS1-205ENST00000482013 ZBED9Q6R2W3 1325 aa15.76■□□□□ 0.11
GGPS1-205ENST00000482013 SCAF1Q9H7N4 1312 aaKnown RBP15.76■□□□□ 0.11
GGPS1-205ENST00000482013 PPP2R1AP30153 589 aa15.76■□□□□ 0.11
GGPS1-205ENST00000482013 SAFB2Q14151 953 aaKnown RBP eCLIP15.76■□□□□ 0.11
GGPS1-205ENST00000482013 CDK19Q9BWU1 502 aa15.76■□□□□ 0.11
GGPS1-205ENST00000482013 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
GGPS1-205ENST00000482013 CGNL1Q0VF96 1302 aa15.75■□□□□ 0.11
GGPS1-205ENST00000482013 SENP3Q9H4L4 574 aaPredicted RBP15.75■□□□□ 0.11
GGPS1-205ENST00000482013 TERF2IPQ9NYB0 399 aa15.75■□□□□ 0.11
GGPS1-205ENST00000482013 GTF3C3Q9Y5Q9 886 aa15.75■□□□□ 0.11
GGPS1-205ENST00000482013 WAPLQ7Z5K2 1190 aa15.74■□□□□ 0.11
GGPS1-205ENST00000482013 ADGRB2O60241 1585 aa15.74■□□□□ 0.11
GGPS1-205ENST00000482013 PLEKHH1Q9ULM0 1364 aa15.74■□□□□ 0.11
GGPS1-205ENST00000482013 WASLO00401 505 aaPredicted RBP15.73■□□□□ 0.11
GGPS1-205ENST00000482013 ATP7BP35670 1465 aa15.72■□□□□ 0.11
GGPS1-205ENST00000482013 PLPPR3Q6T4P5 718 aa15.72■□□□□ 0.11
GGPS1-205ENST00000482013 HDGFL2Q7Z4V5 671 aaPredicted RBP15.72■□□□□ 0.11
GGPS1-205ENST00000482013 ANKLE2Q86XL3 938 aa15.72■□□□□ 0.11
GGPS1-205ENST00000482013 PTCH1Q13635 1447 aa15.71■□□□□ 0.11
GGPS1-205ENST00000482013 PTPRUQ92729 1446 aa15.7■□□□□ 0.1
GGPS1-205ENST00000482013 A0A1W2PP64 1363 aa15.7■□□□□ 0.1
GGPS1-205ENST00000482013 XRN1Q8IZH2 1706 aaKnown RBP15.69■□□□□ 0.1
GGPS1-205ENST00000482013 ANKRD26Q9UPS8 1709 aa15.69■□□□□ 0.1
GGPS1-205ENST00000482013 MORC1Q86VD1 984 aa15.69■□□□□ 0.1
GGPS1-205ENST00000482013 ROBO2Q9HCK4 1378 aa15.69■□□□□ 0.1
GGPS1-205ENST00000482013 CD163L1Q9NR16 1453 aa15.69■□□□□ 0.1
GGPS1-205ENST00000482013 SLC26A8Q96RN1 970 aa15.68■□□□□ 0.1
GGPS1-205ENST00000482013 AMOTL2Q9Y2J4 779 aa15.68■□□□□ 0.1
GGPS1-205ENST00000482013 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
GGPS1-205ENST00000482013 POLR3AO14802 1390 aaPredicted RBP15.67■□□□□ 0.1
GGPS1-205ENST00000482013 CABP1Q9NZU7 370 aa15.66■□□□□ 0.1
GGPS1-205ENST00000482013 BLMP54132 1417 aaPredicted RBP15.66■□□□□ 0.1
GGPS1-205ENST00000482013 CHD2O14647 1828 aaKnown RBP15.66■□□□□ 0.1
GGPS1-205ENST00000482013 CCDC61Q9Y6R9 512 aa15.65■□□□□ 0.1
GGPS1-205ENST00000482013 KIF20BQ96Q89 1820 aa15.65■□□□□ 0.1
GGPS1-205ENST00000482013 CPSF1Q10570 1443 aaKnown RBP15.65■□□□□ 0.1
GGPS1-205ENST00000482013 WDR43Q15061 677 aaKnown RBP eCLIP15.64■□□□□ 0.09
GGPS1-205ENST00000482013 CDC42BPGQ6DT37 1551 aa15.64■□□□□ 0.09
GGPS1-205ENST00000482013 NUDT16Q96DE0 195 aaKnown RBP15.64■□□□□ 0.09
GGPS1-205ENST00000482013 ZNF692Q9BU19 519 aaPredicted RBP15.64■□□□□ 0.09
GGPS1-205ENST00000482013 AKAP12Q02952 1782 aa15.64■□□□□ 0.09
GGPS1-205ENST00000482013 PPIP5K1Q6PFW1 1433 aa15.63■□□□□ 0.09
GGPS1-205ENST00000482013 PDE3BQ13370 1112 aa15.63■□□□□ 0.09
GGPS1-205ENST00000482013 TOPAZ1Q8N9V7 1692 aa15.63■□□□□ 0.09
GGPS1-205ENST00000482013 ITSN1Q15811 1721 aa15.63■□□□□ 0.09
GGPS1-205ENST00000482013 EDC4Q6P2E9 1401 aaKnown RBP15.62■□□□□ 0.09
GGPS1-205ENST00000482013 MON2Q7Z3U7 1717 aa15.62■□□□□ 0.09
GGPS1-205ENST00000482013 PLEKHG3A1L390 1219 aa15.61■□□□□ 0.09
GGPS1-205ENST00000482013 FYB1O15117 783 aa15.61■□□□□ 0.09
GGPS1-205ENST00000482013 NGEFQ8N5V2 710 aa15.61■□□□□ 0.09
GGPS1-205ENST00000482013 NPHP4O75161 1426 aaPredicted RBP15.6■□□□□ 0.09
GGPS1-205ENST00000482013 SMG6Q86US8 1419 aaKnown RBP15.6■□□□□ 0.09
GGPS1-205ENST00000482013 CFAP53Q96M91 514 aa15.6■□□□□ 0.09
GGPS1-205ENST00000482013 ADAMTS8Q9UP79 889 aa15.6■□□□□ 0.09
GGPS1-205ENST00000482013 ANKARQ7Z5J8 1434 aa15.58■□□□□ 0.08
GGPS1-205ENST00000482013 PRR36Q9H6K5 1346 aa15.57■□□□□ 0.08
GGPS1-205ENST00000482013 NEFLP07196 543 aa15.56■□□□□ 0.08
GGPS1-205ENST00000482013 KCNA6P17658 529 aa15.56■□□□□ 0.08
GGPS1-205ENST00000482013 MTHFSP49914 203 aa15.56■□□□□ 0.08
GGPS1-205ENST00000482013 NUDCQ9Y266 331 aa15.56■□□□□ 0.08
GGPS1-205ENST00000482013 SHPRHQ149N8 1683 aa15.56■□□□□ 0.08
GGPS1-205ENST00000482013 GGNBP2Q9H3C7 697 aa15.55■□□□□ 0.08
GGPS1-205ENST00000482013 FMN2Q9NZ56 1722 aa15.54■□□□□ 0.08
GGPS1-205ENST00000482013 NWD1Q149M9 1564 aa15.54■□□□□ 0.08
GGPS1-205ENST00000482013 NCBP3Q53F19 620 aaKnown RBP15.53■□□□□ 0.08
GGPS1-205ENST00000482013 NRKQ7Z2Y5 1582 aa15.53■□□□□ 0.08
GGPS1-205ENST00000482013 AATKQ6ZMQ8 1374 aa15.51■□□□□ 0.07
GGPS1-205ENST00000482013 TNNT2P45379 298 aaPredicted RBP15.51■□□□□ 0.07
GGPS1-205ENST00000482013 ERICH6BQ5W0A0 696 aa15.51■□□□□ 0.07
GGPS1-205ENST00000482013 PNPLA6Q8IY17 1366 aa15.5■□□□□ 0.07
GGPS1-205ENST00000482013 ACEP12821 1306 aa15.5■□□□□ 0.07
GGPS1-205ENST00000482013 TTC21AQ8NDW8 1320 aa15.5■□□□□ 0.07
GGPS1-205ENST00000482013 USP6P35125 1406 aa15.5■□□□□ 0.07
GGPS1-205ENST00000482013 MAP2P11137 1827 aaKnown RBP15.5■□□□□ 0.07
GGPS1-205ENST00000482013 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms