RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
PRPF4B-206ENST00000481109 RSPH14Q9UHP6 348 aa12.74□□□□□ -0.37
PRPF4B-206ENST00000481109 DDIT3P35638 169 aa12.73□□□□□ -0.37
PRPF4B-206ENST00000481109 MLECQ14165 292 aa12.73□□□□□ -0.37
PRPF4B-206ENST00000481109 MNS1Q8NEH6 495 aa12.73□□□□□ -0.37
PRPF4B-206ENST00000481109 NPM1P06748 294 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRPF4B-206ENST00000481109 NBPF10Q6P3W6 841 aaKnown RBP12.73□□□□□ -0.37
PRPF4B-206ENST00000481109 RASSF4Q9H2L5 321 aa12.73□□□□□ -0.37
PRPF4B-206ENST00000481109 DDX41Q9UJV9 622 aaKnown RBP12.73□□□□□ -0.37
PRPF4B-206ENST00000481109 NPC1L1Q9UHC9 1359 aa12.72□□□□□ -0.37
PRPF4B-206ENST00000481109 CADPSQ9ULU8 1353 aa12.72□□□□□ -0.37
PRPF4B-206ENST00000481109 MAPK8IP3Q9UPT6 1336 aa12.72□□□□□ -0.37
PRPF4B-206ENST00000481109 CTIFO43310 598 aaKnown RBP12.72□□□□□ -0.37
PRPF4B-206ENST00000481109 CARMIL1Q5VZK9 1371 aa12.72□□□□□ -0.37
PRPF4B-206ENST00000481109 OS9Q13438 667 aaPredicted RBP12.72□□□□□ -0.37
PRPF4B-206ENST00000481109 MED4Q9NPJ6 270 aa12.72□□□□□ -0.37
PRPF4B-206ENST00000481109 CTTNBP2Q8WZ74 1663 aa12.71□□□□□ -0.37
PRPF4B-206ENST00000481109 RNF217Q8TC41 542 aa12.71□□□□□ -0.37
PRPF4B-206ENST00000481109 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.38
PRPF4B-206ENST00000481109 RAD51AP2Q09MP3 1159 aa12.7□□□□□ -0.38
PRPF4B-206ENST00000481109 CTNNA3Q9UI47 895 aa12.7□□□□□ -0.38
PRPF4B-206ENST00000481109 DHX29Q7Z478 1369 aaKnown RBP12.7□□□□□ -0.38
PRPF4B-206ENST00000481109 SSR1P43307 286 aaKnown RBP12.7□□□□□ -0.38
PRPF4B-206ENST00000481109 ATP1B4Q9UN42 357 aaPredicted RBP12.7□□□□□ -0.38
PRPF4B-206ENST00000481109 ZKSCAN8Q15776 578 aaPredicted RBP12.69□□□□□ -0.38
PRPF4B-206ENST00000481109 PIBF1Q8WXW3 757 aa12.69□□□□□ -0.38
PRPF4B-206ENST00000481109 TSC1Q92574 1164 aa12.69□□□□□ -0.38
PRPF4B-206ENST00000481109 FGD5Q6ZNL6 1462 aa12.69□□□□□ -0.38
PRPF4B-206ENST00000481109 CLEC17AQ6ZS10 378 aa12.69□□□□□ -0.38
PRPF4B-206ENST00000481109 DIAPH3Q9NSV4 1193 aa12.69□□□□□ -0.38
PRPF4B-206ENST00000481109 INSRP06213 1382 aa12.68□□□□□ -0.38
PRPF4B-206ENST00000481109 FKBP5Q13451 457 aaPredicted RBP12.67□□□□□ -0.38
PRPF4B-206ENST00000481109 SEC24BO95487 1268 aa12.67□□□□□ -0.38
PRPF4B-206ENST00000481109 ZNF853P0CG23 659 aa12.67□□□□□ -0.38
PRPF4B-206ENST00000481109 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
PRPF4B-206ENST00000481109 C20orf194Q5TEA3 1177 aa12.67□□□□□ -0.38
PRPF4B-206ENST00000481109 KRT222Q8N1A0 295 aa12.67□□□□□ -0.38
PRPF4B-206ENST00000481109 JARID2Q92833 1246 aaPredicted RBP12.67□□□□□ -0.38
PRPF4B-206ENST00000481109 SPTLC3Q9NUV7 552 aa12.67□□□□□ -0.38
PRPF4B-206ENST00000481109 TERF2IPQ9NYB0 399 aa12.67□□□□□ -0.38
PRPF4B-206ENST00000481109 REC8O95072 547 aa12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 CASQ1P31415 396 aa12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 NBPF6Q5VWK0 638 aa12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 NBPF5PQ86XG9 351 aaPredicted RBP12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 OTUD6BQ8N6M0 293 aa12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 GPATCH11Q8N954 259 aa12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 SGSM3Q96HU1 749 aa12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 NBPF4Q96M43 638 aa12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 ZMYM4Q5VZL5 1548 aa12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 CALRP27797 417 aaKnown RBP12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 CYP2C19P33261 490 aa12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 RAB3GAP1Q15042 981 aa12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 TNPO1Q92973 898 aaKnown RBP12.66□□□□□ -0.38
PRPF4B-206ENST00000481109 TDO2P48775 406 aa12.65□□□□□ -0.38
PRPF4B-206ENST00000481109 FAM53CQ9NYF3 392 aa12.65□□□□□ -0.38
PRPF4B-206ENST00000481109 BRD4O60885 1362 aaPredicted RBP12.65□□□□□ -0.38
PRPF4B-206ENST00000481109 GOLGA6L6A8MZA4 724 aa12.65□□□□□ -0.38
PRPF4B-206ENST00000481109 GOLGA6L22H0YM25 854 aa12.64□□□□□ -0.39
PRPF4B-206ENST00000481109 HNRNPH2P55795 449 aaKnown RBP12.64□□□□□ -0.39
PRPF4B-206ENST00000481109 FAM50AQ14320 339 aaKnown RBP12.64□□□□□ -0.39
PRPF4B-206ENST00000481109 CCDC189A1A4V9 331 aa12.64□□□□□ -0.39
PRPF4B-206ENST00000481109 MAFGO15525 162 aa12.64□□□□□ -0.39
PRPF4B-206ENST00000481109 GSCP56915 257 aaPredicted RBP12.64□□□□□ -0.39
PRPF4B-206ENST00000481109 ANAPC15P60006 121 aa12.64□□□□□ -0.39
PRPF4B-206ENST00000481109 NOLC1Q14978 699 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRPF4B-206ENST00000481109 KIF3CO14782 793 aa12.63□□□□□ -0.39
PRPF4B-206ENST00000481109 TMEM132AQ24JP5 1023 aa12.63□□□□□ -0.39
PRPF4B-206ENST00000481109 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.63□□□□□ -0.39
PRPF4B-206ENST00000481109 PLEKHH2Q8IVE3 1493 aa12.63□□□□□ -0.39
PRPF4B-206ENST00000481109 RAD54L2Q9Y4B4 1467 aa12.63□□□□□ -0.39
PRPF4B-206ENST00000481109 PPP1R12AO14974 1030 aaPredicted RBP12.63□□□□□ -0.39
PRPF4B-206ENST00000481109 SMC5Q8IY18 1101 aa12.63□□□□□ -0.39
PRPF4B-206ENST00000481109 EIF3AQ14152 1382 aaKnown RBP12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 UACAQ9BZF9 1416 aa12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 CHAF1AQ13111 956 aaPredicted RBP12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 CCDC91Q7Z6B0 441 aa12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 STK26Q9P289 416 aa12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 TIAM1Q13009 1591 aa12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 PLIN1O60240 522 aa12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 TRDNQ13061 729 aa12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 CXorf56Q9H5V9 222 aa12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 KIF7Q2M1P5 1343 aa12.62□□□□□ -0.39
PRPF4B-206ENST00000481109 RTEL1-TNFRSF6BF6WH68 1400 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 SWT1Q5T5J6 900 aaKnown RBP12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 KIF18AQ8NI77 898 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 RBSNQ9H1K0 784 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 ERICH4A6NGS2 130 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 CC2D2BQ6DHV5 1058 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 RPAINQ86UA6 219 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 GOLGA6L1Q8N7Z2 621 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 PRDM16Q9HAZ2 1276 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 SUFUQ9UMX1 484 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 JRKLQ9Y4A0 524 aa12.61□□□□□ -0.39
PRPF4B-206ENST00000481109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.6□□□□□ -0.39
PRPF4B-206ENST00000481109 LRRC9Q6ZRR7 1453 aa12.6□□□□□ -0.39
PRPF4B-206ENST00000481109 HSCBQ8IWL3 235 aa12.6□□□□□ -0.39
PRPF4B-206ENST00000481109 ITFG2Q969R8 447 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms