RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 DISP3Q9P2K9 1392 aa17.47■□□□□ 0.39
CNKSR3-204ENST00000479339 NEXMIFQ5QGS0 1516 aa17.47■□□□□ 0.39
CNKSR3-204ENST00000479339 NCOA3Q9Y6Q9 1424 aa17.46■□□□□ 0.39
CNKSR3-204ENST00000479339 NRXN3Q9Y4C0 1643 aa17.45■□□□□ 0.38
CNKSR3-204ENST00000479339 RBM33Q96EV2 1170 aaKnown RBP17.45■□□□□ 0.38
CNKSR3-204ENST00000479339 KIF1BO60333 1816 aa17.45■□□□□ 0.38
CNKSR3-204ENST00000479339 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
CNKSR3-204ENST00000479339 FAM135BQ49AJ0 1406 aa17.45■□□□□ 0.38
CNKSR3-204ENST00000479339 MPHOSPH9Q99550 1183 aa17.44■□□□□ 0.38
CNKSR3-204ENST00000479339 MSH6P52701 1360 aa17.44■□□□□ 0.38
CNKSR3-204ENST00000479339 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
CNKSR3-204ENST00000479339 DDRGK1Q96HY6 314 aa17.43■□□□□ 0.38
CNKSR3-204ENST00000479339 RPGRIP1LQ68CZ1 1315 aa17.43■□□□□ 0.38
CNKSR3-204ENST00000479339 LAS1LQ9Y4W2 734 aaKnown RBP17.43■□□□□ 0.38
CNKSR3-204ENST00000479339 FOXD1Q16676 465 aa17.42■□□□□ 0.38
CNKSR3-204ENST00000479339 AMOTL2Q9Y2J4 779 aa17.42■□□□□ 0.38
CNKSR3-204ENST00000479339 MS4A1P11836 297 aa17.41■□□□□ 0.38
CNKSR3-204ENST00000479339 VGFO15240 615 aaPredicted RBP17.4■□□□□ 0.38
CNKSR3-204ENST00000479339 METP08581 1390 aa17.39■□□□□ 0.37
CNKSR3-204ENST00000479339 NUDCQ9Y266 331 aa17.39■□□□□ 0.37
CNKSR3-204ENST00000479339 XRN1Q8IZH2 1706 aaKnown RBP17.39■□□□□ 0.37
CNKSR3-204ENST00000479339 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
CNKSR3-204ENST00000479339 SLAIN2Q9P270 581 aa17.37■□□□□ 0.37
CNKSR3-204ENST00000479339 PRKRIP1Q9H875 184 aaPredicted RBP17.37■□□□□ 0.37
CNKSR3-204ENST00000479339 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
CNKSR3-204ENST00000479339 C19orf44Q9H6X5 657 aa17.36■□□□□ 0.37
CNKSR3-204ENST00000479339 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
CNKSR3-204ENST00000479339 SPATA31E1Q6ZUB1 1445 aa17.36■□□□□ 0.37
CNKSR3-204ENST00000479339 ROBO1Q9Y6N7 1651 aa17.35■□□□□ 0.37
CNKSR3-204ENST00000479339 C14orf37Q86TY3 774 aa17.35■□□□□ 0.37
CNKSR3-204ENST00000479339 PPLO60437 1756 aa17.34■□□□□ 0.37
CNKSR3-204ENST00000479339 ILDR2Q71H61 639 aa17.34■□□□□ 0.37
CNKSR3-204ENST00000479339 CADPS2Q86UW7 1296 aa17.34■□□□□ 0.37
CNKSR3-204ENST00000479339 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.37
CNKSR3-204ENST00000479339 BACH2Q9BYV9 841 aa17.33■□□□□ 0.37
CNKSR3-204ENST00000479339 PDE4AP27815 886 aa17.33■□□□□ 0.36
CNKSR3-204ENST00000479339 NPM2Q86SE8 214 aaKnown RBP17.33■□□□□ 0.36
CNKSR3-204ENST00000479339 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.33■□□□□ 0.36
CNKSR3-204ENST00000479339 DCCP43146 1447 aa17.32■□□□□ 0.36
CNKSR3-204ENST00000479339 SETD1AO15047 1707 aaKnown RBP17.32■□□□□ 0.36
CNKSR3-204ENST00000479339 ATF3P18847 181 aa17.31■□□□□ 0.36
CNKSR3-204ENST00000479339 FRAT1Q92837 279 aaPredicted RBP17.31■□□□□ 0.36
CNKSR3-204ENST00000479339 PRAG1Q86YV5 1406 aa17.31■□□□□ 0.36
CNKSR3-204ENST00000479339 ANKRD30BQ9BXX2 1392 aa17.31■□□□□ 0.36
CNKSR3-204ENST00000479339 NFKBIBQ15653 356 aa17.31■□□□□ 0.36
CNKSR3-204ENST00000479339 CCDC184Q52MB2 194 aa17.31■□□□□ 0.36
CNKSR3-204ENST00000479339 PTCH1Q13635 1447 aa17.29■□□□□ 0.36
CNKSR3-204ENST00000479339 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
CNKSR3-204ENST00000479339 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
CNKSR3-204ENST00000479339 HSPA5P11021 654 aaKnown RBP17.28■□□□□ 0.36
CNKSR3-204ENST00000479339 ADGRL3Q9HAR2 1447 aa17.27■□□□□ 0.36
CNKSR3-204ENST00000479339 ZMYND15Q9H091 742 aa17.27■□□□□ 0.36
CNKSR3-204ENST00000479339 IFT172Q9UG01 1749 aa17.27■□□□□ 0.36
CNKSR3-204ENST00000479339 EIF4G2P78344 907 aaKnown RBP eCLIP17.26■□□□□ 0.35
CNKSR3-204ENST00000479339 CCDC7Q96M83 1385 aa17.25■□□□□ 0.35
CNKSR3-204ENST00000479339 ROBO2Q9HCK4 1378 aa17.25■□□□□ 0.35
CNKSR3-204ENST00000479339 MST1RQ04912 1400 aa17.24■□□□□ 0.35
CNKSR3-204ENST00000479339 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
CNKSR3-204ENST00000479339 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
CNKSR3-204ENST00000479339 RRP9O43818 475 aaKnown RBP17.23■□□□□ 0.35
CNKSR3-204ENST00000479339 PIK3C2GO75747 1445 aa17.23■□□□□ 0.35
CNKSR3-204ENST00000479339 BRINP3Q76B58 766 aa17.23■□□□□ 0.35
CNKSR3-204ENST00000479339 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
CNKSR3-204ENST00000479339 COL16A1Q07092 1604 aaPredicted RBP17.22■□□□□ 0.35
CNKSR3-204ENST00000479339 NALCNQ8IZF0 1738 aa17.22■□□□□ 0.35
CNKSR3-204ENST00000479339 JCADQ9P266 1359 aa17.22■□□□□ 0.35
CNKSR3-204ENST00000479339 PHF23Q9BUL5 403 aaPredicted RBP17.21■□□□□ 0.35
CNKSR3-204ENST00000479339 MYOM2P54296 1465 aa17.21■□□□□ 0.35
CNKSR3-204ENST00000479339 NRXN1Q9ULB1 1477 aa17.21■□□□□ 0.35
CNKSR3-204ENST00000479339 SOCS7O14512 581 aa17.21■□□□□ 0.35
CNKSR3-204ENST00000479339 LRPPRCP42704 1394 aaKnown RBP17.21■□□□□ 0.34
CNKSR3-204ENST00000479339 TECPR2O15040 1411 aa17.2■□□□□ 0.34
CNKSR3-204ENST00000479339 ASXL1Q8IXJ9 1541 aa17.2■□□□□ 0.34
CNKSR3-204ENST00000479339 PODXL2Q9NZ53 605 aa17.2■□□□□ 0.34
CNKSR3-204ENST00000479339 ABCC11Q96J66 1382 aa17.19■□□□□ 0.34
CNKSR3-204ENST00000479339 DAXXQ9UER7 740 aaPredicted RBP17.18■□□□□ 0.34
CNKSR3-204ENST00000479339 C14orf93Q9H972 538 aaKnown RBP17.18■□□□□ 0.34
CNKSR3-204ENST00000479339 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
CNKSR3-204ENST00000479339 C1orf167Q5SNV9 1468 aa17.17■□□□□ 0.34
CNKSR3-204ENST00000479339 HSP90AA2PQ14568 343 aaPredicted RBP17.15■□□□□ 0.34
CNKSR3-204ENST00000479339 TMEM132EQ6IEE7 984 aa17.15■□□□□ 0.34
CNKSR3-204ENST00000479339 KNDC1Q76NI1 1749 aa17.15■□□□□ 0.34
CNKSR3-204ENST00000479339 RRP1P56182 461 aaKnown RBP17.14■□□□□ 0.34
CNKSR3-204ENST00000479339 STK26Q9P289 416 aa17.14■□□□□ 0.34
CNKSR3-204ENST00000479339 RGS17Q9UGC6 210 aaPredicted RBP17.14■□□□□ 0.34
CNKSR3-204ENST00000479339 YTHDC2Q9H6S0 1430 aaKnown RBP17.14■□□□□ 0.33
CNKSR3-204ENST00000479339 NHSL1Q5SYE7 1610 aa17.14■□□□□ 0.33
CNKSR3-204ENST00000479339 SPATA31A6Q5VVP1 1343 aa17.14■□□□□ 0.33
CNKSR3-204ENST00000479339 SIRT1Q96EB6 747 aa17.14■□□□□ 0.33
CNKSR3-204ENST00000479339 LAMC1P11047 1609 aa17.14■□□□□ 0.33
CNKSR3-204ENST00000479339 L1TD1Q5T7N2 865 aaKnown RBP17.13■□□□□ 0.33
CNKSR3-204ENST00000479339 CFAP70Q5T0N1 1121 aa17.13■□□□□ 0.33
CNKSR3-204ENST00000479339 CDC42BPGQ6DT37 1551 aa17.13■□□□□ 0.33
CNKSR3-204ENST00000479339 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
CNKSR3-204ENST00000479339 DCAF11Q8TEB1 546 aa17.12■□□□□ 0.33
CNKSR3-204ENST00000479339 STAC3Q96MF2 364 aa17.12■□□□□ 0.33
CNKSR3-204ENST00000479339 WAPLQ7Z5K2 1190 aa17.11■□□□□ 0.33
CNKSR3-204ENST00000479339 HSP90AA1P07900 732 aaKnown RBP17.11■□□□□ 0.33
CNKSR3-204ENST00000479339 PLEKHH1Q9ULM0 1364 aa17.1■□□□□ 0.33
CNKSR3-204ENST00000479339 LRRC59Q96AG4 307 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms