RNA–Protein interactions for RNA: ENST00000478946.1

STAMBP-208, Transcript of STAM binding protein, humanhuman

TSL 3

Gene STAMBP, Length 955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-208ENST00000478946 RGS22Q8NE09 1264 aa13.39□□□□□ -0.27
STAMBP-208ENST00000478946 TRIM34Q9BYJ4 488 aa13.39□□□□□ -0.27
STAMBP-208ENST00000478946 SRPK2P78362 688 aaKnown RBP13.38□□□□□ -0.27
STAMBP-208ENST00000478946 PCDHGC3Q9UN70 934 aa13.38□□□□□ -0.27
STAMBP-208ENST00000478946 CTDSPL2Q05D32 466 aa13.37□□□□□ -0.27
STAMBP-208ENST00000478946 CFAP70Q5T0N1 1121 aa13.37□□□□□ -0.27
STAMBP-208ENST00000478946 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
STAMBP-208ENST00000478946 USTQ9Y2C2 406 aa13.37□□□□□ -0.27
STAMBP-208ENST00000478946 SMAPO00193 183 aa13.36□□□□□ -0.27
STAMBP-208ENST00000478946 PPP1R12CQ9BZL4 782 aa13.34□□□□□ -0.27
STAMBP-208ENST00000478946 BAZ1BQ9UIG0 1483 aaKnown RBP13.34□□□□□ -0.27
STAMBP-208ENST00000478946 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.33□□□□□ -0.28
STAMBP-208ENST00000478946 BRD1O95696 1058 aa13.33□□□□□ -0.28
STAMBP-208ENST00000478946 MFAP1P55081 439 aaKnown RBP13.33□□□□□ -0.28
STAMBP-208ENST00000478946 MTMR2Q13614 643 aa13.33□□□□□ -0.28
STAMBP-208ENST00000478946 HELBQ8NG08 1087 aaPredicted RBP13.33□□□□□ -0.28
STAMBP-208ENST00000478946 ALG2Q9H553 416 aa13.33□□□□□ -0.28
STAMBP-208ENST00000478946 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
STAMBP-208ENST00000478946 SLC10A3P09131 477 aa13.32□□□□□ -0.28
STAMBP-208ENST00000478946 KCNA1Q09470 495 aa13.32□□□□□ -0.28
STAMBP-208ENST00000478946 PROX2Q3B8N5 592 aa13.32□□□□□ -0.28
STAMBP-208ENST00000478946 PEG3Q9GZU2 1588 aa13.3□□□□□ -0.28
STAMBP-208ENST00000478946 POTEJP0CG39 1038 aa13.3□□□□□ -0.28
STAMBP-208ENST00000478946 CSB-PGBD3P0DP91 1061 aa13.3□□□□□ -0.28
STAMBP-208ENST00000478946 RFX1P22670 979 aa13.3□□□□□ -0.28
STAMBP-208ENST00000478946 GUCA2AQ02747 115 aa13.3□□□□□ -0.28
STAMBP-208ENST00000478946 VAC14Q08AM6 782 aa13.3□□□□□ -0.28
STAMBP-208ENST00000478946 MTMR7Q9Y216 660 aa13.3□□□□□ -0.28
STAMBP-208ENST00000478946 HLA-CQ95604 372 aa13.29□□□□□ -0.28
STAMBP-208ENST00000478946 LRRN4Q8WUT4 740 aa13.28□□□□□ -0.28
STAMBP-208ENST00000478946 PDS5BQ9NTI5 1447 aa13.28□□□□□ -0.28
STAMBP-208ENST00000478946 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
STAMBP-208ENST00000478946 SOX11P35716 441 aa13.27□□□□□ -0.29
STAMBP-208ENST00000478946 KIAA1468Q9P260 1216 aa13.27□□□□□ -0.29
STAMBP-208ENST00000478946 PALM3A6NDB9 673 aaPredicted RBP13.26□□□□□ -0.29
STAMBP-208ENST00000478946 CFAP99D6REC4 459 aa13.26□□□□□ -0.29
STAMBP-208ENST00000478946 SWT1Q5T5J6 900 aaKnown RBP13.26□□□□□ -0.29
STAMBP-208ENST00000478946 KIF21AQ7Z4S6 1674 aa13.26□□□□□ -0.29
STAMBP-208ENST00000478946 ZBED2Q9BTP6 218 aa13.25□□□□□ -0.29
STAMBP-208ENST00000478946 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
STAMBP-208ENST00000478946 GRIPAP1Q4V328 841 aa13.23□□□□□ -0.29
STAMBP-208ENST00000478946 UCN2Q96RP3 112 aa13.23□□□□□ -0.29
STAMBP-208ENST00000478946 HOXB1P14653 301 aaPredicted RBP13.22□□□□□ -0.29
STAMBP-208ENST00000478946 EPS8L1Q8TE68 723 aa13.22□□□□□ -0.29
STAMBP-208ENST00000478946 TSC1Q92574 1164 aa13.22□□□□□ -0.29
STAMBP-208ENST00000478946 C6orf229H3BNL8 230 aa13.21□□□□□ -0.29
STAMBP-208ENST00000478946 LMOD1P29536 600 aaPredicted RBP13.21□□□□□ -0.29
STAMBP-208ENST00000478946 PRR7Q8TB68 274 aa13.21□□□□□ -0.29
STAMBP-208ENST00000478946 KCNH8Q96L42 1107 aa13.21□□□□□ -0.29
STAMBP-208ENST00000478946 TFIP11Q9UBB9 837 aaKnown RBP13.21□□□□□ -0.29
STAMBP-208ENST00000478946 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
STAMBP-208ENST00000478946 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
STAMBP-208ENST00000478946 ATG7O95352 703 aa13.2□□□□□ -0.3
STAMBP-208ENST00000478946 SLF2Q8IX21 1173 aa13.2□□□□□ -0.3
STAMBP-208ENST00000478946 FUT2Q10981 343 aa13.19□□□□□ -0.3
STAMBP-208ENST00000478946 RABGEF1Q9UJ41 708 aa13.19□□□□□ -0.3
STAMBP-208ENST00000478946 MRC2Q9UBG0 1479 aa13.18□□□□□ -0.3
STAMBP-208ENST00000478946 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
STAMBP-208ENST00000478946 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
STAMBP-208ENST00000478946 WDR62O43379 1518 aa13.17□□□□□ -0.3
STAMBP-208ENST00000478946 NR6A1Q15406 480 aa13.16□□□□□ -0.3
STAMBP-208ENST00000478946 SLC4A5Q9BY07 1137 aa13.16□□□□□ -0.3
STAMBP-208ENST00000478946 SCUBE2Q9NQ36 999 aa13.16□□□□□ -0.3
STAMBP-208ENST00000478946 MAFBQ9Y5Q3 323 aaPredicted RBP13.16□□□□□ -0.3
STAMBP-208ENST00000478946 TMEM88BA6NKF7 163 aa13.15□□□□□ -0.3
STAMBP-208ENST00000478946 ATP6V1AP38606 617 aa13.15□□□□□ -0.3
STAMBP-208ENST00000478946 SEMA3FQ13275 785 aa13.15□□□□□ -0.3
STAMBP-208ENST00000478946 FOXD4L5Q5VV16 416 aaPredicted RBP13.15□□□□□ -0.3
STAMBP-208ENST00000478946 FOXD4L4Q8WXT5 416 aaPredicted RBP13.15□□□□□ -0.3
STAMBP-208ENST00000478946 VRTNQ9H8Y1 702 aa13.15□□□□□ -0.3
STAMBP-208ENST00000478946 CARNS1A5YM72 827 aa13.14□□□□□ -0.31
STAMBP-208ENST00000478946 POTEB2H3BUK9 544 aa13.14□□□□□ -0.31
STAMBP-208ENST00000478946 SNPHO15079 494 aa13.14□□□□□ -0.31
STAMBP-208ENST00000478946 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
STAMBP-208ENST00000478946 PNMA1Q8ND90 353 aa13.14□□□□□ -0.31
STAMBP-208ENST00000478946 SEPT9Q9UHD8 586 aaPredicted RBP13.13□□□□□ -0.31
STAMBP-208ENST00000478946 CFHP08603 1231 aa13.12□□□□□ -0.31
STAMBP-208ENST00000478946 FAM98CQ17RN3 349 aaKnown RBP13.12□□□□□ -0.31
STAMBP-208ENST00000478946 DESI1Q6ICB0 168 aa13.12□□□□□ -0.31
STAMBP-208ENST00000478946 SYMPKQ92797 1274 aaKnown RBP13.12□□□□□ -0.31
STAMBP-208ENST00000478946 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
STAMBP-208ENST00000478946 EIF4G2P78344 907 aaKnown RBP eCLIP13.11□□□□□ -0.31
STAMBP-208ENST00000478946 TBC1D9Q6ZT07 1266 aa13.11□□□□□ -0.31
STAMBP-208ENST00000478946 SP7Q8TDD2 431 aaPredicted RBP13.11□□□□□ -0.31
STAMBP-208ENST00000478946 ATP9BO43861 1147 aa13.1□□□□□ -0.31
STAMBP-208ENST00000478946 PSEN2P49810 448 aa13.1□□□□□ -0.31
STAMBP-208ENST00000478946 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
STAMBP-208ENST00000478946 IVNS1ABPQ9Y6Y0 642 aa13.1□□□□□ -0.31
STAMBP-208ENST00000478946 CDCA8Q53HL2 280 aa13.09□□□□□ -0.31
STAMBP-208ENST00000478946 NR1H3Q13133 447 aa13.07□□□□□ -0.32
STAMBP-208ENST00000478946 SND1Q7KZF4 910 aaKnown RBP eCLIP13.07□□□□□ -0.32
STAMBP-208ENST00000478946 SAMD7Q7Z3H4 446 aa13.07□□□□□ -0.32
STAMBP-208ENST00000478946 ARHGAP33O14559 1287 aa13.06□□□□□ -0.32
STAMBP-208ENST00000478946 RBM25P49756 843 aaKnown RBP13.06□□□□□ -0.32
STAMBP-208ENST00000478946 ELOAQ14241 798 aaKnown RBP13.05□□□□□ -0.32
STAMBP-208ENST00000478946 CCDC27Q2M243 656 aa13.05□□□□□ -0.32
STAMBP-208ENST00000478946 MORN1Q5T089 497 aa13.05□□□□□ -0.32
STAMBP-208ENST00000478946 LYPD8Q6UX82 237 aa13.05□□□□□ -0.32
STAMBP-208ENST00000478946 LAPTM4BQ86VI4 370 aa13.05□□□□□ -0.32
STAMBP-208ENST00000478946 ZNF428Q96B54 188 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms