RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 NEO1Q92859 1461 aa11.59□□□□□ -0.55
USP33-208ENST00000477949 PRIM1P49642 420 aaKnown RBP11.59□□□□□ -0.55
USP33-208ENST00000477949 OSBPP22059 807 aa11.58□□□□□ -0.56
USP33-208ENST00000477949 PPP4CP60510 307 aa11.58□□□□□ -0.56
USP33-208ENST00000477949 FAM198AQ9UFP1 575 aa11.58□□□□□ -0.56
USP33-208ENST00000477949 STRCQ7RTU9 1775 aa11.57□□□□□ -0.56
USP33-208ENST00000477949 TTC37Q6PGP7 1564 aa11.57□□□□□ -0.56
USP33-208ENST00000477949 SMAPO00193 183 aa11.56□□□□□ -0.56
USP33-208ENST00000477949 RICTORQ6R327 1708 aa11.56□□□□□ -0.56
USP33-208ENST00000477949 TATDN2Q93075 761 aa11.56□□□□□ -0.56
USP33-208ENST00000477949 RAPGEF2Q9Y4G8 1499 aa11.55□□□□□ -0.56
USP33-208ENST00000477949 SAMD7Q7Z3H4 446 aa11.54□□□□□ -0.56
USP33-208ENST00000477949 PNMA3Q9UL41 463 aa11.54□□□□□ -0.56
USP33-208ENST00000477949 ATP10BO94823 1461 aa11.54□□□□□ -0.56
USP33-208ENST00000477949 NBPF26B4DH59 902 aa11.53□□□□□ -0.56
USP33-208ENST00000477949 SUPT5HO00267 1087 aaKnown RBP11.53□□□□□ -0.56
USP33-208ENST00000477949 ARID4BQ4LE39 1312 aaPredicted RBP11.53□□□□□ -0.56
USP33-208ENST00000477949 YEATS2Q9ULM3 1422 aa11.52□□□□□ -0.56
USP33-208ENST00000477949 ZMYM4Q5VZL5 1548 aa11.52□□□□□ -0.57
USP33-208ENST00000477949 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.57
USP33-208ENST00000477949 LTBP4Q8N2S1 1624 aa11.52□□□□□ -0.57
USP33-208ENST00000477949 PREX1Q8TCU6 1659 aa11.52□□□□□ -0.57
USP33-208ENST00000477949 CTTNBP2Q8WZ74 1663 aa11.52□□□□□ -0.57
USP33-208ENST00000477949 FHOD3Q2V2M9 1422 aa11.52□□□□□ -0.57
USP33-208ENST00000477949 C3orf80F5H4A9 247 aa11.51□□□□□ -0.57
USP33-208ENST00000477949 RBM27Q9P2N5 1060 aaKnown RBP11.51□□□□□ -0.57
USP33-208ENST00000477949 FER1L4A9Z1Z3 1794 aa11.51□□□□□ -0.57
USP33-208ENST00000477949 FANCAO15360 1455 aa11.51□□□□□ -0.57
USP33-208ENST00000477949 CDHR5Q9HBB8 845 aa11.5□□□□□ -0.57
USP33-208ENST00000477949 GOLGA3Q08378 1498 aa11.5□□□□□ -0.57
USP33-208ENST00000477949 NUDT18Q6ZVK8 323 aa11.49□□□□□ -0.57
USP33-208ENST00000477949 IQSEC2Q5JU85 1478 aa11.49□□□□□ -0.57
USP33-208ENST00000477949 ARHGEF12Q9NZN5 1544 aa11.49□□□□□ -0.57
USP33-208ENST00000477949 SRCAPQ6ZRS2 3230 aa11.48□□□□□ -0.57
USP33-208ENST00000477949 DENND4BO75064 1496 aaPredicted RBP11.47□□□□□ -0.57
USP33-208ENST00000477949 POGZQ7Z3K3 1410 aa11.47□□□□□ -0.57
USP33-208ENST00000477949 TJAP1Q5JTD0 557 aa11.47□□□□□ -0.57
USP33-208ENST00000477949 ZFYVE16Q7Z3T8 1539 aa11.46□□□□□ -0.57
USP33-208ENST00000477949 PTPRTO14522 1441 aa11.46□□□□□ -0.57
USP33-208ENST00000477949 AKNAQ7Z591 1439 aa11.46□□□□□ -0.57
USP33-208ENST00000477949 TTC13Q8NBP0 860 aa11.46□□□□□ -0.57
USP33-208ENST00000477949 NPDC1Q9NQX5 325 aaPredicted RBP11.46□□□□□ -0.57
USP33-208ENST00000477949 EFCAB5A4FU69 1503 aa11.45□□□□□ -0.58
USP33-208ENST00000477949 ARHGEF1Q92888 912 aaKnown RBP11.44□□□□□ -0.58
USP33-208ENST00000477949 ARID3CA6NKF2 412 aa11.43□□□□□ -0.58
USP33-208ENST00000477949 IL21Q9HBE4 155 aa11.43□□□□□ -0.58
USP33-208ENST00000477949 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
USP33-208ENST00000477949 MAGI2Q86UL8 1455 aa11.43□□□□□ -0.58
USP33-208ENST00000477949 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
USP33-208ENST00000477949 PADI6Q6TGC4 694 aa11.41□□□□□ -0.58
USP33-208ENST00000477949 NECTIN2Q92692 538 aa11.41□□□□□ -0.58
USP33-208ENST00000477949 MTRQ99707 1265 aa11.41□□□□□ -0.58
USP33-208ENST00000477949 CFAP74Q9C0B2 1584 aa11.41□□□□□ -0.58
USP33-208ENST00000477949 SETD1BQ9UPS6 1966 aaKnown RBP11.39□□□□□ -0.59
USP33-208ENST00000477949 RAPGEF6Q8TEU7 1601 aa11.39□□□□□ -0.59
USP33-208ENST00000477949 RNF40O75150 1001 aa11.39□□□□□ -0.59
USP33-208ENST00000477949 CEBPAP49715 358 aaPredicted RBP11.39□□□□□ -0.59
USP33-208ENST00000477949 UHRF1BP1Q6BDS2 1440 aa11.39□□□□□ -0.59
USP33-208ENST00000477949 NUP153P49790 1475 aaKnown RBP11.38□□□□□ -0.59
USP33-208ENST00000477949 SWT1Q5T5J6 900 aaKnown RBP11.38□□□□□ -0.59
USP33-208ENST00000477949 SLF2Q8IX21 1173 aa11.38□□□□□ -0.59
USP33-208ENST00000477949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.38□□□□□ -0.59
USP33-208ENST00000477949 MED1Q15648 1581 aaPredicted RBP11.37□□□□□ -0.59
USP33-208ENST00000477949 APLP1P51693 650 aa11.37□□□□□ -0.59
USP33-208ENST00000477949 MLECQ14165 292 aa11.37□□□□□ -0.59
USP33-208ENST00000477949 SAMD9Q5K651 1589 aa11.37□□□□□ -0.59
USP33-208ENST00000477949 NCOA1Q15788 1441 aa11.36□□□□□ -0.59
USP33-208ENST00000477949 MLLT3P42568 568 aaPredicted RBP11.36□□□□□ -0.59
USP33-208ENST00000477949 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
USP33-208ENST00000477949 ZNF516Q92618 1163 aa11.36□□□□□ -0.59
USP33-208ENST00000477949 EYA1Q99502 592 aa11.36□□□□□ -0.59
USP33-208ENST00000477949 C9orf84Q5VXU9 1444 aa11.35□□□□□ -0.59
USP33-208ENST00000477949 LAPTM4AQ15012 233 aa11.35□□□□□ -0.59
USP33-208ENST00000477949 ATP10AO60312 1499 aa11.35□□□□□ -0.59
USP33-208ENST00000477949 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
USP33-208ENST00000477949 PPP1R18Q6NYC8 613 aa11.34□□□□□ -0.59
USP33-208ENST00000477949 Q6ZNB5 142 aa11.34□□□□□ -0.59
USP33-208ENST00000477949 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
USP33-208ENST00000477949 C3P01024 1663 aa11.33□□□□□ -0.6
USP33-208ENST00000477949 PRKD2Q9BZL6 878 aa11.32□□□□□ -0.6
USP33-208ENST00000477949 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.32□□□□□ -0.6
USP33-208ENST00000477949 SCAPERQ9BY12 1400 aa11.3□□□□□ -0.6
USP33-208ENST00000477949 GFRA3O60609 400 aa11.3□□□□□ -0.6
USP33-208ENST00000477949 PTGDRQ13258 359 aa11.3□□□□□ -0.6
USP33-208ENST00000477949 P3H3Q8IVL6 736 aa11.3□□□□□ -0.6
USP33-208ENST00000477949 REREQ9P2R6 1566 aa11.29□□□□□ -0.6
USP33-208ENST00000477949 NKX2-3Q8TAU0 364 aa11.29□□□□□ -0.6
USP33-208ENST00000477949 V9GY48 417 aaPredicted RBP11.29□□□□□ -0.6
USP33-208ENST00000477949 KDM5CP41229 1560 aa11.28□□□□□ -0.6
USP33-208ENST00000477949 COPS2P61201 443 aa11.28□□□□□ -0.6
USP33-208ENST00000477949 PRR14Q9BWN1 585 aa11.28□□□□□ -0.6
USP33-208ENST00000477949 ZNF335Q9H4Z2 1342 aaPredicted RBP11.28□□□□□ -0.6
USP33-208ENST00000477949 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
USP33-208ENST00000477949 TRAPPC8Q9Y2L5 1435 aa11.27□□□□□ -0.6
USP33-208ENST00000477949 UBAP1LF5GYI3 381 aa11.27□□□□□ -0.61
USP33-208ENST00000477949 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.61
USP33-208ENST00000477949 PLCH2O75038 1416 aa11.26□□□□□ -0.61
USP33-208ENST00000477949 NUTM2FA1L443 756 aa11.26□□□□□ -0.61
USP33-208ENST00000477949 DNAJB2P25686 324 aa11.26□□□□□ -0.61
USP33-208ENST00000477949 GGCXP38435 758 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms