RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.33
CHD6-207ENST00000476641 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
CHD6-207ENST00000476641 RAPGEF6Q8TEU7 1601 aa13□□□□□ -0.33
CHD6-207ENST00000476641 NUDT18Q6ZVK8 323 aa13□□□□□ -0.33
CHD6-207ENST00000476641 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
CHD6-207ENST00000476641 CD109Q6YHK3 1445 aa12.99□□□□□ -0.33
CHD6-207ENST00000476641 HDGFP51858 240 aaKnown RBP12.99□□□□□ -0.33
CHD6-207ENST00000476641 ARHGAP35Q9NRY4 1499 aa12.98□□□□□ -0.33
CHD6-207ENST00000476641 OSBPP22059 807 aa12.98□□□□□ -0.33
CHD6-207ENST00000476641 PPP1R18Q6NYC8 613 aa12.98□□□□□ -0.33
CHD6-207ENST00000476641 EFCAB5A4FU69 1503 aa12.98□□□□□ -0.33
CHD6-207ENST00000476641 LCE2BO14633 110 aa12.97□□□□□ -0.33
CHD6-207ENST00000476641 ZNF516Q92618 1163 aa12.97□□□□□ -0.33
CHD6-207ENST00000476641 APLP1P51693 650 aa12.96□□□□□ -0.33
CHD6-207ENST00000476641 RBM27Q9P2N5 1060 aaKnown RBP12.96□□□□□ -0.33
CHD6-207ENST00000476641 TRAF7Q6Q0C0 670 aa12.95□□□□□ -0.34
CHD6-207ENST00000476641 TEX14Q8IWB6 1497 aa12.95□□□□□ -0.34
CHD6-207ENST00000476641 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
CHD6-207ENST00000476641 MAGI3Q5TCQ9 1506 aa12.94□□□□□ -0.34
CHD6-207ENST00000476641 ATP1B4Q9UN42 357 aaPredicted RBP12.94□□□□□ -0.34
CHD6-207ENST00000476641 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.93□□□□□ -0.34
CHD6-207ENST00000476641 V9GY48 417 aaPredicted RBP12.93□□□□□ -0.34
CHD6-207ENST00000476641 NRG2O14511 850 aaPredicted RBP12.91□□□□□ -0.34
CHD6-207ENST00000476641 CFAP44Q96MT7 982 aa12.91□□□□□ -0.34
CHD6-207ENST00000476641 CFAP43Q8NDM7 1665 aa12.9□□□□□ -0.34
CHD6-207ENST00000476641 SWT1Q5T5J6 900 aaKnown RBP12.9□□□□□ -0.34
CHD6-207ENST00000476641 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
CHD6-207ENST00000476641 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
CHD6-207ENST00000476641 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
CHD6-207ENST00000476641 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
CHD6-207ENST00000476641 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
CHD6-207ENST00000476641 ABCA9Q8IUA7 1624 aa12.88□□□□□ -0.35
CHD6-207ENST00000476641 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
CHD6-207ENST00000476641 COPS2P61201 443 aa12.87□□□□□ -0.35
CHD6-207ENST00000476641 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
CHD6-207ENST00000476641 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
CHD6-207ENST00000476641 FMN1Q68DA7 1419 aa12.87□□□□□ -0.35
CHD6-207ENST00000476641 RAPGEF3O95398 923 aa12.86□□□□□ -0.35
CHD6-207ENST00000476641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.84□□□□□ -0.35
CHD6-207ENST00000476641 GGCXP38435 758 aa12.84□□□□□ -0.35
CHD6-207ENST00000476641 TTC37Q6PGP7 1564 aa12.84□□□□□ -0.35
CHD6-207ENST00000476641 CLIP1P30622 1438 aa12.83□□□□□ -0.36
CHD6-207ENST00000476641 ADGRL1O94910 1474 aa12.83□□□□□ -0.36
CHD6-207ENST00000476641 ARAP3Q8WWN8 1544 aa12.83□□□□□ -0.36
CHD6-207ENST00000476641 HECW1Q76N89 1606 aa12.82□□□□□ -0.36
CHD6-207ENST00000476641 SLC4A3P48751 1232 aa12.82□□□□□ -0.36
CHD6-207ENST00000476641 PDZRN3Q9UPQ7 1066 aa12.82□□□□□ -0.36
CHD6-207ENST00000476641 PCF11O94913 1555 aaKnown RBP12.81□□□□□ -0.36
CHD6-207ENST00000476641 EYA1Q99502 592 aa12.8□□□□□ -0.36
CHD6-207ENST00000476641 NEO1Q92859 1461 aa12.79□□□□□ -0.36
CHD6-207ENST00000476641 FRMPD1Q5SYB0 1578 aa12.79□□□□□ -0.36
CHD6-207ENST00000476641 LOC105371045A0A1W2PR82 267 aa12.79□□□□□ -0.36
CHD6-207ENST00000476641 KIF14Q15058 1648 aa12.79□□□□□ -0.36
CHD6-207ENST00000476641 LRRIQ1Q96JM4 1722 aa12.79□□□□□ -0.36
CHD6-207ENST00000476641 CASKIN1Q8WXD9 1431 aa12.79□□□□□ -0.36
CHD6-207ENST00000476641 FANCAO15360 1455 aa12.78□□□□□ -0.36
CHD6-207ENST00000476641 ZPR1O75312 459 aa12.78□□□□□ -0.36
CHD6-207ENST00000476641 TROQ12816 1431 aaPredicted RBP12.78□□□□□ -0.36
CHD6-207ENST00000476641 AKNAQ7Z591 1439 aa12.78□□□□□ -0.36
CHD6-207ENST00000476641 TMUB1Q9BVT8 246 aa12.77□□□□□ -0.37
CHD6-207ENST00000476641 PRR14Q9BWN1 585 aa12.76□□□□□ -0.37
CHD6-207ENST00000476641 PCDHB3Q9Y5E6 796 aa12.76□□□□□ -0.37
CHD6-207ENST00000476641 PHLDB1Q86UU1 1377 aa12.76□□□□□ -0.37
CHD6-207ENST00000476641 PLCH2O75038 1416 aa12.76□□□□□ -0.37
CHD6-207ENST00000476641 DENND4BO75064 1496 aaPredicted RBP12.74□□□□□ -0.37
CHD6-207ENST00000476641 CEP162Q5TB80 1403 aa12.74□□□□□ -0.37
CHD6-207ENST00000476641 CDK11AQ9UQ88 783 aaPredicted RBP12.74□□□□□ -0.37
CHD6-207ENST00000476641 FYCO1Q9BQS8 1478 aa12.72□□□□□ -0.37
CHD6-207ENST00000476641 SCAPERQ9BY12 1400 aa12.72□□□□□ -0.37
CHD6-207ENST00000476641 YEATS2Q9ULM3 1422 aa12.72□□□□□ -0.37
CHD6-207ENST00000476641 BLOC1S3Q6QNY0 202 aa12.72□□□□□ -0.37
CHD6-207ENST00000476641 MLLT3P42568 568 aaPredicted RBP12.71□□□□□ -0.37
CHD6-207ENST00000476641 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
CHD6-207ENST00000476641 ZNF787Q6DD87 383 aa12.71□□□□□ -0.37
CHD6-207ENST00000476641 CCDC18Q5T9S5 1454 aa12.71□□□□□ -0.38
CHD6-207ENST00000476641 EFCAB2Q5VUJ9 269 aa12.7□□□□□ -0.38
CHD6-207ENST00000476641 ARHGAP5Q13017 1502 aa12.69□□□□□ -0.38
CHD6-207ENST00000476641 RICTORQ6R327 1708 aa12.69□□□□□ -0.38
CHD6-207ENST00000476641 RNF223E7ERA6 249 aa12.69□□□□□ -0.38
CHD6-207ENST00000476641 DNAJB2P25686 324 aa12.69□□□□□ -0.38
CHD6-207ENST00000476641 POGZQ7Z3K3 1410 aa12.69□□□□□ -0.38
CHD6-207ENST00000476641 ARID4BQ4LE39 1312 aaPredicted RBP12.68□□□□□ -0.38
CHD6-207ENST00000476641 TLL1O43897 1013 aa12.68□□□□□ -0.38
CHD6-207ENST00000476641 AFAP1Q8N556 730 aa12.68□□□□□ -0.38
CHD6-207ENST00000476641 ARHGEF40Q8TER5 1519 aa12.67□□□□□ -0.38
CHD6-207ENST00000476641 SLC19A1P41440 591 aa12.67□□□□□ -0.38
CHD6-207ENST00000476641 ARHGEF1Q92888 912 aaKnown RBP12.67□□□□□ -0.38
CHD6-207ENST00000476641 CFAP74Q9C0B2 1584 aa12.67□□□□□ -0.38
CHD6-207ENST00000476641 MYO5CQ9NQX4 1742 aa12.66□□□□□ -0.38
CHD6-207ENST00000476641 PTGDRQ13258 359 aa12.66□□□□□ -0.38
CHD6-207ENST00000476641 RBM46Q8TBY0 533 aaKnown RBP12.66□□□□□ -0.38
CHD6-207ENST00000476641 ARHGEF12Q9NZN5 1544 aa12.66□□□□□ -0.38
CHD6-207ENST00000476641 TRIM67Q6ZTA4 783 aa12.65□□□□□ -0.38
CHD6-207ENST00000476641 EMID1Q96A84 441 aaPredicted RBP12.65□□□□□ -0.38
CHD6-207ENST00000476641 TMEM134Q9H6X4 195 aa12.65□□□□□ -0.38
CHD6-207ENST00000476641 ZMYM4Q5VZL5 1548 aa12.65□□□□□ -0.38
CHD6-207ENST00000476641 ZFYVE16Q7Z3T8 1539 aa12.65□□□□□ -0.38
CHD6-207ENST00000476641 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
CHD6-207ENST00000476641 TRAPPC8Q9Y2L5 1435 aa12.64□□□□□ -0.39
CHD6-207ENST00000476641 MLECQ14165 292 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms