RNA–Protein interactions for RNA: ENST00000476300.1

RPL13A-207, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-207ENST00000476300 PIK3R4Q99570 1358 aa13.96□□□□□ -0.18
RPL13A-207ENST00000476300 ASXL1Q8IXJ9 1541 aa13.95□□□□□ -0.18
RPL13A-207ENST00000476300 MED14O60244 1454 aa13.95□□□□□ -0.18
RPL13A-207ENST00000476300 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
RPL13A-207ENST00000476300 MRS2Q9HD23 443 aa13.95□□□□□ -0.18
RPL13A-207ENST00000476300 ATAD2Q6PL18 1390 aa13.95□□□□□ -0.18
RPL13A-207ENST00000476300 NINLQ9Y2I6 1382 aa13.95□□□□□ -0.18
RPL13A-207ENST00000476300 TECPR2O15040 1411 aa13.94□□□□□ -0.18
RPL13A-207ENST00000476300 CNGB1Q14028 1251 aaPredicted RBP13.94□□□□□ -0.18
RPL13A-207ENST00000476300 ARHGEF28Q8N1W1 1705 aaKnown RBP13.94□□□□□ -0.18
RPL13A-207ENST00000476300 TERF2IPQ9NYB0 399 aa13.94□□□□□ -0.18
RPL13A-207ENST00000476300 QRICH2Q9H0J4 1663 aa13.94□□□□□ -0.18
RPL13A-207ENST00000476300 NPC1L1Q9UHC9 1359 aa13.94□□□□□ -0.18
RPL13A-207ENST00000476300 MYBBP1AQ9BQG0 1328 aaKnown RBP13.93□□□□□ -0.18
RPL13A-207ENST00000476300 WASLO00401 505 aaPredicted RBP13.93□□□□□ -0.18
RPL13A-207ENST00000476300 CC2D1BQ5T0F9 858 aaKnown RBP13.93□□□□□ -0.18
RPL13A-207ENST00000476300 NRXN3Q9Y4C0 1643 aa13.93□□□□□ -0.18
RPL13A-207ENST00000476300 AMER1Q5JTC6 1135 aaPredicted RBP13.91□□□□□ -0.18
RPL13A-207ENST00000476300 HDGFL2Q7Z4V5 671 aaPredicted RBP13.91□□□□□ -0.18
RPL13A-207ENST00000476300 SETD1AO15047 1707 aaKnown RBP13.9□□□□□ -0.18
RPL13A-207ENST00000476300 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
RPL13A-207ENST00000476300 CARD14Q9BXL6 1004 aa13.9□□□□□ -0.18
RPL13A-207ENST00000476300 DIP2AQ14689 1571 aa13.9□□□□□ -0.18
RPL13A-207ENST00000476300 PARD3Q8TEW0 1356 aa13.89□□□□□ -0.19
RPL13A-207ENST00000476300 PLEKHH1Q9ULM0 1364 aa13.89□□□□□ -0.19
RPL13A-207ENST00000476300 PIAS4Q8N2W9 510 aaPredicted RBP13.89□□□□□ -0.19
RPL13A-207ENST00000476300 ZNF142P52746 1687 aaPredicted RBP13.88□□□□□ -0.19
RPL13A-207ENST00000476300 BRD4O60885 1362 aaPredicted RBP13.88□□□□□ -0.19
RPL13A-207ENST00000476300 CABP1Q9NZU7 370 aa13.88□□□□□ -0.19
RPL13A-207ENST00000476300 CCDC61Q9Y6R9 512 aa13.88□□□□□ -0.19
RPL13A-207ENST00000476300 CGNL1Q0VF96 1302 aa13.88□□□□□ -0.19
RPL13A-207ENST00000476300 ANKRD36BQ8N2N9 1353 aa13.87□□□□□ -0.19
RPL13A-207ENST00000476300 ROBO2Q9HCK4 1378 aa13.87□□□□□ -0.19
RPL13A-207ENST00000476300 NUDT16Q96DE0 195 aaKnown RBP13.87□□□□□ -0.19
RPL13A-207ENST00000476300 ZNF692Q9BU19 519 aaPredicted RBP13.87□□□□□ -0.19
RPL13A-207ENST00000476300 NCKAP5LQ9HCH0 1330 aa13.87□□□□□ -0.19
RPL13A-207ENST00000476300 TULP4Q9NRJ4 1543 aa13.86□□□□□ -0.19
RPL13A-207ENST00000476300 KCNA6P17658 529 aa13.86□□□□□ -0.19
RPL13A-207ENST00000476300 CCDC184Q52MB2 194 aa13.86□□□□□ -0.19
RPL13A-207ENST00000476300 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
RPL13A-207ENST00000476300 NPHP4O75161 1426 aaPredicted RBP13.86□□□□□ -0.19
RPL13A-207ENST00000476300 PTPRUQ92729 1446 aa13.86□□□□□ -0.19
RPL13A-207ENST00000476300 KNDC1Q76NI1 1749 aa13.86□□□□□ -0.19
RPL13A-207ENST00000476300 MORC1Q86VD1 984 aa13.85□□□□□ -0.19
RPL13A-207ENST00000476300 CPS1P31327 1500 aa13.85□□□□□ -0.19
RPL13A-207ENST00000476300 PNISRQ8TF01 805 aaKnown RBP13.84□□□□□ -0.19
RPL13A-207ENST00000476300 PTCH1Q13635 1447 aa13.83□□□□□ -0.2
RPL13A-207ENST00000476300 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
RPL13A-207ENST00000476300 NSD2O96028 1365 aa13.83□□□□□ -0.2
RPL13A-207ENST00000476300 NSD3Q9BZ95 1437 aa13.82□□□□□ -0.2
RPL13A-207ENST00000476300 PLEKHG3A1L390 1219 aa13.81□□□□□ -0.2
RPL13A-207ENST00000476300 MYOM1P52179 1685 aa13.8□□□□□ -0.2
RPL13A-207ENST00000476300 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
RPL13A-207ENST00000476300 PROSER2Q86WR7 435 aaPredicted RBP13.78□□□□□ -0.2
RPL13A-207ENST00000476300 A0A1W2PP64 1363 aa13.78□□□□□ -0.2
RPL13A-207ENST00000476300 PPIP5K1Q6PFW1 1433 aa13.78□□□□□ -0.2
RPL13A-207ENST00000476300 FYB1O15117 783 aa13.77□□□□□ -0.21
RPL13A-207ENST00000476300 ATP7BP35670 1465 aa13.77□□□□□ -0.21
RPL13A-207ENST00000476300 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
RPL13A-207ENST00000476300 HSPA2P54652 639 aa13.76□□□□□ -0.21
RPL13A-207ENST00000476300 C14orf37Q86TY3 774 aa13.76□□□□□ -0.21
RPL13A-207ENST00000476300 CFAP53Q96M91 514 aa13.76□□□□□ -0.21
RPL13A-207ENST00000476300 PRR36Q9H6K5 1346 aa13.75□□□□□ -0.21
RPL13A-207ENST00000476300 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.21
RPL13A-207ENST00000476300 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
RPL13A-207ENST00000476300 INSRP06213 1382 aa13.74□□□□□ -0.21
RPL13A-207ENST00000476300 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.74□□□□□ -0.21
RPL13A-207ENST00000476300 NGDNQ8NEJ9 315 aaKnown RBP13.74□□□□□ -0.21
RPL13A-207ENST00000476300 GGNBP2Q9H3C7 697 aa13.74□□□□□ -0.21
RPL13A-207ENST00000476300 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
RPL13A-207ENST00000476300 ADGRB2O60241 1585 aa13.74□□□□□ -0.21
RPL13A-207ENST00000476300 XRN1Q8IZH2 1706 aaKnown RBP13.73□□□□□ -0.21
RPL13A-207ENST00000476300 ACEP12821 1306 aa13.73□□□□□ -0.21
RPL13A-207ENST00000476300 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
RPL13A-207ENST00000476300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.73□□□□□ -0.21
RPL13A-207ENST00000476300 CD163L1Q9NR16 1453 aa13.73□□□□□ -0.21
RPL13A-207ENST00000476300 ANKARQ7Z5J8 1434 aa13.73□□□□□ -0.21
RPL13A-207ENST00000476300 USP32Q8NFA0 1604 aa13.72□□□□□ -0.21
RPL13A-207ENST00000476300 MSH5O43196 834 aa13.72□□□□□ -0.21
RPL13A-207ENST00000476300 TNNT2P45379 298 aaPredicted RBP13.72□□□□□ -0.21
RPL13A-207ENST00000476300 C19orf44Q9H6X5 657 aa13.72□□□□□ -0.21
RPL13A-207ENST00000476300 EDC4Q6P2E9 1401 aaKnown RBP13.72□□□□□ -0.21
RPL13A-207ENST00000476300 POLR3AO14802 1390 aaPredicted RBP13.71□□□□□ -0.21
RPL13A-207ENST00000476300 MTHFSP49914 203 aa13.71□□□□□ -0.21
RPL13A-207ENST00000476300 COG3Q96JB2 828 aa13.71□□□□□ -0.21
RPL13A-207ENST00000476300 NCOA3Q9Y6Q9 1424 aa13.71□□□□□ -0.22
RPL13A-207ENST00000476300 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
RPL13A-207ENST00000476300 ZBED9Q6R2W3 1325 aa13.69□□□□□ -0.22
RPL13A-207ENST00000476300 TTC21BQ7Z4L5 1316 aa13.69□□□□□ -0.22
RPL13A-207ENST00000476300 TTC21AQ8NDW8 1320 aa13.69□□□□□ -0.22
RPL13A-207ENST00000476300 PMFBP1Q8TBY8 1022 aa13.69□□□□□ -0.22
RPL13A-207ENST00000476300 ADAMTS8Q9UP79 889 aa13.69□□□□□ -0.22
RPL13A-207ENST00000476300 PHF8Q9UPP1 1060 aa13.69□□□□□ -0.22
RPL13A-207ENST00000476300 NUDCQ9Y266 331 aa13.69□□□□□ -0.22
RPL13A-207ENST00000476300 ADGRL3Q9HAR2 1447 aa13.68□□□□□ -0.22
RPL13A-207ENST00000476300 CDC42BPGQ6DT37 1551 aa13.67□□□□□ -0.22
RPL13A-207ENST00000476300 ATF3P18847 181 aa13.67□□□□□ -0.22
RPL13A-207ENST00000476300 NGEFQ8N5V2 710 aa13.67□□□□□ -0.22
RPL13A-207ENST00000476300 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
RPL13A-207ENST00000476300 LMTK3Q96Q04 1460 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms