RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 PPP4CP60510 307 aa7.16□□□□□ -1.26
VPS13D-206ENST00000476045 METTL3Q86U44 580 aaKnown RBP7.16□□□□□ -1.26
VPS13D-206ENST00000476045 UHRF1BP1LA0JNW5 1464 aa7.16□□□□□ -1.26
VPS13D-206ENST00000476045 ABCC2Q92887 1545 aa7.16□□□□□ -1.26
VPS13D-206ENST00000476045 FECHP22830 423 aa7.15□□□□□ -1.26
VPS13D-206ENST00000476045 APLP1P51693 650 aa7.15□□□□□ -1.26
VPS13D-206ENST00000476045 TJAP1Q5JTD0 557 aa7.15□□□□□ -1.26
VPS13D-206ENST00000476045 GPIHBP1Q8IV16 184 aa7.15□□□□□ -1.26
VPS13D-206ENST00000476045 GLI2P10070 1586 aa7.14□□□□□ -1.27
VPS13D-206ENST00000476045 GOLGA3Q08378 1498 aa7.14□□□□□ -1.27
VPS13D-206ENST00000476045 TNIKQ9UKE5 1360 aa7.14□□□□□ -1.27
VPS13D-206ENST00000476045 KDM6BO15054 1643 aa7.13□□□□□ -1.27
VPS13D-206ENST00000476045 DISP1Q96F81 1524 aa7.13□□□□□ -1.27
VPS13D-206ENST00000476045 HDGFP51858 240 aaKnown RBP7.13□□□□□ -1.27
VPS13D-206ENST00000476045 KCNC4Q03721 635 aa7.13□□□□□ -1.27
VPS13D-206ENST00000476045 PLB1Q6P1J6 1458 aa7.12□□□□□ -1.27
VPS13D-206ENST00000476045 FAM161AQ3B820 660 aa7.12□□□□□ -1.27
VPS13D-206ENST00000476045 PRR14Q9BWN1 585 aa7.12□□□□□ -1.27
VPS13D-206ENST00000476045 ZCCHC11Q5TAX3 1644 aaKnown RBP7.12□□□□□ -1.27
VPS13D-206ENST00000476045 PTPRGP23470 1445 aa7.11□□□□□ -1.27
VPS13D-206ENST00000476045 TSPOAP1O95153 1857 aa7.11□□□□□ -1.27
VPS13D-206ENST00000476045 MTRQ99707 1265 aa7.11□□□□□ -1.27
VPS13D-206ENST00000476045 IL21Q9HBE4 155 aa7.11□□□□□ -1.27
VPS13D-206ENST00000476045 MAP3K4Q9Y6R4 1608 aa7.11□□□□□ -1.27
VPS13D-206ENST00000476045 KDM5BQ9UGL1 1544 aa7.11□□□□□ -1.27
VPS13D-206ENST00000476045 PRXQ9BXM0 1461 aa7.11□□□□□ -1.27
VPS13D-206ENST00000476045 EEA1Q15075 1411 aa7.1□□□□□ -1.27
VPS13D-206ENST00000476045 UACAQ9BZF9 1416 aa7.1□□□□□ -1.27
VPS13D-206ENST00000476045 PPRC1Q5VV67 1664 aaKnown RBP7.1□□□□□ -1.27
VPS13D-206ENST00000476045 SLC4A3P48751 1232 aa7.1□□□□□ -1.27
VPS13D-206ENST00000476045 MAP2K5Q13163 448 aa7.1□□□□□ -1.27
VPS13D-206ENST00000476045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.1□□□□□ -1.27
VPS13D-206ENST00000476045 CFAP43Q8NDM7 1665 aa7.09□□□□□ -1.27
VPS13D-206ENST00000476045 TULP1O00294 542 aaPredicted RBP7.09□□□□□ -1.27
VPS13D-206ENST00000476045 SLC10A3P09131 477 aa7.09□□□□□ -1.27
VPS13D-206ENST00000476045 PHOX2BQ99453 314 aa7.09□□□□□ -1.27
VPS13D-206ENST00000476045 TEX14Q8IWB6 1497 aa7.09□□□□□ -1.27
VPS13D-206ENST00000476045 SAMD9Q5K651 1589 aa7.08□□□□□ -1.28
VPS13D-206ENST00000476045 ACTN4O43707 911 aaKnown RBP7.08□□□□□ -1.28
VPS13D-206ENST00000476045 ASXL2Q76L83 1435 aa7.08□□□□□ -1.28
VPS13D-206ENST00000476045 ABCA8O94911 1581 aa7.08□□□□□ -1.28
VPS13D-206ENST00000476045 RNF40O75150 1001 aa7.07□□□□□ -1.28
VPS13D-206ENST00000476045 DAXXQ9UER7 740 aaPredicted RBP7.07□□□□□ -1.28
VPS13D-206ENST00000476045 WDR7Q9Y4E6 1490 aa7.06□□□□□ -1.28
VPS13D-206ENST00000476045 KIF21BO75037 1637 aa7.06□□□□□ -1.28
VPS13D-206ENST00000476045 EFCAB5A4FU69 1503 aa7.06□□□□□ -1.28
VPS13D-206ENST00000476045 EPRSP07814 1512 aaKnown RBP7.06□□□□□ -1.28
VPS13D-206ENST00000476045 MINK1Q8N4C8 1332 aaPredicted RBP7.05□□□□□ -1.28
VPS13D-206ENST00000476045 IRF6O14896 467 aa7.05□□□□□ -1.28
VPS13D-206ENST00000476045 CFHP08603 1231 aa7.05□□□□□ -1.28
VPS13D-206ENST00000476045 KMT5BQ4FZB7 885 aa7.05□□□□□ -1.28
VPS13D-206ENST00000476045 FAM69CQ0P6D2 419 aa7.04□□□□□ -1.28
VPS13D-206ENST00000476045 LMOD2Q6P5Q4 547 aa7.04□□□□□ -1.28
VPS13D-206ENST00000476045 ZNF516Q92618 1163 aa7.04□□□□□ -1.28
VPS13D-206ENST00000476045 PCDHB3Q9Y5E6 796 aa7.04□□□□□ -1.28
VPS13D-206ENST00000476045 RAPGEF6Q8TEU7 1601 aa7.04□□□□□ -1.28
VPS13D-206ENST00000476045 ZPR1O75312 459 aa7.03□□□□□ -1.28
VPS13D-206ENST00000476045 BLOC1S3Q6QNY0 202 aa7.02□□□□□ -1.29
VPS13D-206ENST00000476045 CCDC102AQ96A19 550 aa7.02□□□□□ -1.29
VPS13D-206ENST00000476045 TMUB1Q9BVT8 246 aa7.02□□□□□ -1.29
VPS13D-206ENST00000476045 CFAP74Q9C0B2 1584 aa7.02□□□□□ -1.29
VPS13D-206ENST00000476045 MAGI3Q5TCQ9 1506 aa7.01□□□□□ -1.29
VPS13D-206ENST00000476045 ABCA9Q8IUA7 1624 aa7.01□□□□□ -1.29
VPS13D-206ENST00000476045 ZMYND10O75800 440 aa7.01□□□□□ -1.29
VPS13D-206ENST00000476045 SULF1Q8IWU6 871 aa7.01□□□□□ -1.29
VPS13D-206ENST00000476045 COPS2P61201 443 aa7□□□□□ -1.29
VPS13D-206ENST00000476045 BARGINQ6ZT62 677 aa7□□□□□ -1.29
VPS13D-206ENST00000476045 FAM9AQ8IZU1 332 aaPredicted RBP7□□□□□ -1.29
VPS13D-206ENST00000476045 CD46P15529 392 aa6.99□□□□□ -1.29
VPS13D-206ENST00000476045 GCGRP47871 477 aa6.99□□□□□ -1.29
VPS13D-206ENST00000476045 RSPH4AQ5TD94 716 aa6.99□□□□□ -1.29
VPS13D-206ENST00000476045 PPP1R18Q6NYC8 613 aa6.99□□□□□ -1.29
VPS13D-206ENST00000476045 NKX2-3Q8TAU0 364 aa6.99□□□□□ -1.29
VPS13D-206ENST00000476045 NLRP7Q8WX94 980 aa6.99□□□□□ -1.29
VPS13D-206ENST00000476045 ZC3H15Q8WU90 426 aaKnown RBP6.98□□□□□ -1.29
VPS13D-206ENST00000476045 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.98□□□□□ -1.29
VPS13D-206ENST00000476045 NR1I2O75469 434 aa6.97□□□□□ -1.29
VPS13D-206ENST00000476045 MORN1Q5T089 497 aa6.97□□□□□ -1.29
VPS13D-206ENST00000476045 V9GY48 417 aaPredicted RBP6.97□□□□□ -1.29
VPS13D-206ENST00000476045 HECW1Q76N89 1606 aa6.97□□□□□ -1.29
VPS13D-206ENST00000476045 PHLDB1Q86UU1 1377 aa6.96□□□□□ -1.29
VPS13D-206ENST00000476045 DDX11L8A8MPP1 907 aa6.96□□□□□ -1.3
VPS13D-206ENST00000476045 TLL1O43897 1013 aa6.96□□□□□ -1.3
VPS13D-206ENST00000476045 ADH1BP00325 375 aa6.96□□□□□ -1.3
VPS13D-206ENST00000476045 AMHR2Q16671 573 aa6.96□□□□□ -1.3
VPS13D-206ENST00000476045 THAP11Q96EK4 314 aa6.96□□□□□ -1.3
VPS13D-206ENST00000476045 SALL2Q9Y467 1007 aaPredicted RBP6.96□□□□□ -1.3
VPS13D-206ENST00000476045 NEO1Q92859 1461 aa6.96□□□□□ -1.3
VPS13D-206ENST00000476045 ARAP3Q8WWN8 1544 aa6.96□□□□□ -1.3
VPS13D-206ENST00000476045 CD109Q6YHK3 1445 aa6.95□□□□□ -1.3
VPS13D-206ENST00000476045 FUT2Q10981 343 aa6.95□□□□□ -1.3
VPS13D-206ENST00000476045 RDH13Q8NBN7 331 aa6.95□□□□□ -1.3
VPS13D-206ENST00000476045 GPCPD1Q9NPB8 672 aa6.95□□□□□ -1.3
VPS13D-206ENST00000476045 ADGRL1O94910 1474 aa6.95□□□□□ -1.3
VPS13D-206ENST00000476045 NUP153P49790 1475 aaKnown RBP6.95□□□□□ -1.3
VPS13D-206ENST00000476045 ARHGEF40Q8TER5 1519 aa6.95□□□□□ -1.3
VPS13D-206ENST00000476045 CLCN1P35523 988 aa6.94□□□□□ -1.3
VPS13D-206ENST00000476045 GGCXP38435 758 aa6.94□□□□□ -1.3
VPS13D-206ENST00000476045 ATP6V1AP38606 617 aa6.94□□□□□ -1.3
VPS13D-206ENST00000476045 MDM2Q00987 491 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms