RNA–Protein interactions for RNA: ENST00000475916.1

SLF1-204, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-204ENST00000475916 ATP6V1AP38606 617 aa10.52□□□□□ -0.73
SLF1-204ENST00000475916 HDGFL1Q5TGJ6 251 aa10.52□□□□□ -0.73
SLF1-204ENST00000475916 LAPTM4BQ86VI4 370 aa10.52□□□□□ -0.73
SLF1-204ENST00000475916 PCDHGC3Q9UN70 934 aa10.52□□□□□ -0.73
SLF1-204ENST00000475916 POM121CA8CG34 1229 aa10.51□□□□□ -0.73
SLF1-204ENST00000475916 CFHP08603 1231 aa10.51□□□□□ -0.73
SLF1-204ENST00000475916 PBX2P40425 430 aa10.51□□□□□ -0.73
SLF1-204ENST00000475916 GUCA2AQ02747 115 aa10.51□□□□□ -0.73
SLF1-204ENST00000475916 AEBP1Q8IUX7 1158 aa10.51□□□□□ -0.73
SLF1-204ENST00000475916 GJD4Q96KN9 370 aaPredicted RBP10.51□□□□□ -0.73
SLF1-204ENST00000475916 FUT2Q10981 343 aa10.5□□□□□ -0.73
SLF1-204ENST00000475916 RETREG2Q8NC44 543 aa10.49□□□□□ -0.73
SLF1-204ENST00000475916 PATL2C9JE40 543 aaKnown RBP10.48□□□□□ -0.73
SLF1-204ENST00000475916 SOX11P35716 441 aa10.48□□□□□ -0.73
SLF1-204ENST00000475916 Q3C1V9 767 aa10.48□□□□□ -0.73
SLF1-204ENST00000475916 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
SLF1-204ENST00000475916 SAMD7Q7Z3H4 446 aa10.48□□□□□ -0.73
SLF1-204ENST00000475916 PRR14Q9BWN1 585 aa10.48□□□□□ -0.73
SLF1-204ENST00000475916 HLA-CQ95604 372 aa10.47□□□□□ -0.73
SLF1-204ENST00000475916 PBXIP1Q96AQ6 731 aa10.47□□□□□ -0.73
SLF1-204ENST00000475916 IRF5Q13568 498 aa10.46□□□□□ -0.73
SLF1-204ENST00000475916 NPM2Q86SE8 214 aaKnown RBP10.46□□□□□ -0.73
SLF1-204ENST00000475916 PRR7Q8TB68 274 aa10.46□□□□□ -0.73
SLF1-204ENST00000475916 LRRN4Q8WUT4 740 aa10.46□□□□□ -0.73
SLF1-204ENST00000475916 HMX1Q9NP08 348 aaPredicted RBP10.46□□□□□ -0.73
SLF1-204ENST00000475916 CFAP99D6REC4 459 aa10.45□□□□□ -0.74
SLF1-204ENST00000475916 CSB-PGBD3P0DP91 1061 aa10.45□□□□□ -0.74
SLF1-204ENST00000475916 VAC14Q08AM6 782 aa10.45□□□□□ -0.74
SLF1-204ENST00000475916 VPS9D1Q9Y2B5 631 aa10.45□□□□□ -0.74
SLF1-204ENST00000475916 SEMA3FQ13275 785 aa10.44□□□□□ -0.74
SLF1-204ENST00000475916 TRIM34Q9BYJ4 488 aa10.44□□□□□ -0.74
SLF1-204ENST00000475916 RFX1P22670 979 aa10.43□□□□□ -0.74
SLF1-204ENST00000475916 RETREG3Q86VR2 466 aa10.43□□□□□ -0.74
SLF1-204ENST00000475916 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
SLF1-204ENST00000475916 STAC3Q96MF2 364 aa10.43□□□□□ -0.74
SLF1-204ENST00000475916 AXIN2Q9Y2T1 843 aa10.43□□□□□ -0.74
SLF1-204ENST00000475916 EIF4G2P78344 907 aaKnown RBP eCLIP10.42□□□□□ -0.74
SLF1-204ENST00000475916 DMRTA1Q5VZB9 504 aa10.42□□□□□ -0.74
SLF1-204ENST00000475916 LRCH3Q96II8 777 aa10.42□□□□□ -0.74
SLF1-204ENST00000475916 EMP3P54852 163 aa10.41□□□□□ -0.74
SLF1-204ENST00000475916 ZFRQ96KR1 1074 aaKnown RBP10.41□□□□□ -0.74
SLF1-204ENST00000475916 PPP1R12CQ9BZL4 782 aa10.41□□□□□ -0.74
SLF1-204ENST00000475916 DESI1Q6ICB0 168 aa10.4□□□□□ -0.74
SLF1-204ENST00000475916 GOLGA8CPA6NN73 597 aa10.39□□□□□ -0.75
SLF1-204ENST00000475916 NR6A1Q15406 480 aa10.39□□□□□ -0.75
SLF1-204ENST00000475916 ALG2Q9H553 416 aa10.39□□□□□ -0.75
SLF1-204ENST00000475916 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.39□□□□□ -0.75
SLF1-204ENST00000475916 USTQ9Y2C2 406 aa10.39□□□□□ -0.75
SLF1-204ENST00000475916 TK2O00142 265 aa10.38□□□□□ -0.75
SLF1-204ENST00000475916 ACTN4O43707 911 aaKnown RBP10.38□□□□□ -0.75
SLF1-204ENST00000475916 ZNF687Q8N1G0 1237 aa10.38□□□□□ -0.75
SLF1-204ENST00000475916 SYMPKQ92797 1274 aaKnown RBP10.38□□□□□ -0.75
SLF1-204ENST00000475916 LMOD1P29536 600 aaPredicted RBP10.37□□□□□ -0.75
SLF1-204ENST00000475916 MORN1Q5T089 497 aa10.37□□□□□ -0.75
SLF1-204ENST00000475916 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.36□□□□□ -0.75
SLF1-204ENST00000475916 PALM3A6NDB9 673 aaPredicted RBP10.36□□□□□ -0.75
SLF1-204ENST00000475916 ADAMTS19Q8TE59 1207 aa10.36□□□□□ -0.75
SLF1-204ENST00000475916 CFAP70Q5T0N1 1121 aa10.35□□□□□ -0.75
SLF1-204ENST00000475916 TMCO4Q5TGY1 634 aa10.35□□□□□ -0.75
SLF1-204ENST00000475916 EPS8L1Q8TE68 723 aa10.35□□□□□ -0.75
SLF1-204ENST00000475916 SLC27A5Q9Y2P5 690 aa10.35□□□□□ -0.75
SLF1-204ENST00000475916 PPP4CP60510 307 aa10.34□□□□□ -0.75
SLF1-204ENST00000475916 PUS10Q3MIT2 529 aaKnown RBP10.34□□□□□ -0.75
SLF1-204ENST00000475916 POTEEQ6S8J3 1075 aa10.34□□□□□ -0.75
SLF1-204ENST00000475916 LYPD8Q6UX82 237 aa10.34□□□□□ -0.75
SLF1-204ENST00000475916 ANKK1Q8NFD2 765 aa10.34□□□□□ -0.75
SLF1-204ENST00000475916 ZNF592Q92610 1267 aa10.34□□□□□ -0.75
SLF1-204ENST00000475916 TFIP11Q9UBB9 837 aaKnown RBP10.34□□□□□ -0.75
SLF1-204ENST00000475916 BHMG1C9JSJ3 638 aaPredicted RBP10.33□□□□□ -0.76
SLF1-204ENST00000475916 PER1O15534 1290 aaPredicted RBP10.33□□□□□ -0.76
SLF1-204ENST00000475916 USB1Q9BQ65 265 aaKnown RBP10.33□□□□□ -0.76
SLF1-204ENST00000475916 FAM205CA6NFA0 338 aa10.32□□□□□ -0.76
SLF1-204ENST00000475916 BRD1O95696 1058 aa10.32□□□□□ -0.76
SLF1-204ENST00000475916 KCNA1Q09470 495 aa10.32□□□□□ -0.76
SLF1-204ENST00000475916 NR1H3Q13133 447 aa10.32□□□□□ -0.76
SLF1-204ENST00000475916 GZF1Q9H116 711 aaPredicted RBP10.32□□□□□ -0.76
SLF1-204ENST00000475916 SALL2Q9Y467 1007 aaPredicted RBP10.32□□□□□ -0.76
SLF1-204ENST00000475916 NR1I2O75469 434 aa10.31□□□□□ -0.76
SLF1-204ENST00000475916 FMNL1O95466 1100 aaPredicted RBP10.31□□□□□ -0.76
SLF1-204ENST00000475916 OTUD5Q96G74 571 aa10.31□□□□□ -0.76
SLF1-204ENST00000475916 GPR37L1O60883 481 aa10.3□□□□□ -0.76
SLF1-204ENST00000475916 ZBBXA8MT70 800 aa10.29□□□□□ -0.76
SLF1-204ENST00000475916 ST18O60284 1047 aa10.29□□□□□ -0.76
SLF1-204ENST00000475916 ZC3H4Q9UPT8 1303 aaKnown RBP10.29□□□□□ -0.76
SLF1-204ENST00000475916 B4GALNT3Q6L9W6 998 aa10.28□□□□□ -0.76
SLF1-204ENST00000475916 ADGRD1Q6QNK2 874 aa10.28□□□□□ -0.76
SLF1-204ENST00000475916 MARVELD3Q96A59 401 aa10.28□□□□□ -0.76
SLF1-204ENST00000475916 VRTNQ9H8Y1 702 aa10.28□□□□□ -0.76
SLF1-204ENST00000475916 FKBPLQ9UIM3 349 aa10.28□□□□□ -0.76
SLF1-204ENST00000475916 PCDHB3Q9Y5E6 796 aa10.28□□□□□ -0.76
SLF1-204ENST00000475916 ATP9BO43861 1147 aa10.27□□□□□ -0.77
SLF1-204ENST00000475916 CTHP32929 405 aa10.27□□□□□ -0.77
SLF1-204ENST00000475916 ARMC2Q8NEN0 867 aa10.27□□□□□ -0.77
SLF1-204ENST00000475916 MAFBQ9Y5Q3 323 aaPredicted RBP10.27□□□□□ -0.77
SLF1-204ENST00000475916 ATG7O95352 703 aa10.26□□□□□ -0.77
SLF1-204ENST00000475916 BRICD5Q6PL45 260 aa10.26□□□□□ -0.77
SLF1-204ENST00000475916 TSR3Q9UJK0 312 aaKnown RBP10.26□□□□□ -0.77
SLF1-204ENST00000475916 HPS5Q9UPZ3 1129 aa10.26□□□□□ -0.77
SLF1-204ENST00000475916 SRPK2P78362 688 aaKnown RBP10.25□□□□□ -0.77
SLF1-204ENST00000475916 PTPRNQ16849 979 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms