RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 ZMYM3Q14202 1370 aa14.08□□□□□ -0.16
U2AF1-209ENST00000475639 C22orf23Q9BZE7 217 aa14.08□□□□□ -0.16
U2AF1-209ENST00000475639 COG6Q9Y2V7 657 aa14.08□□□□□ -0.16
U2AF1-209ENST00000475639 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.16
U2AF1-209ENST00000475639 ARHGEF12Q9NZN5 1544 aa14.08□□□□□ -0.16
U2AF1-209ENST00000475639 GPATCH3Q96I76 525 aa14.07□□□□□ -0.16
U2AF1-209ENST00000475639 PANK1Q8TE04 598 aa14.07□□□□□ -0.16
U2AF1-209ENST00000475639 ZNF644Q9H582 1327 aaPredicted RBP14.07□□□□□ -0.16
U2AF1-209ENST00000475639 HMMRO75330 724 aa14.07□□□□□ -0.16
U2AF1-209ENST00000475639 TPD52L1Q16890 204 aaPredicted RBP14.07□□□□□ -0.16
U2AF1-209ENST00000475639 CAMSAP2Q08AD1 1489 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 BECN2A8MW95 431 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 XPCQ01831 940 aaPredicted RBP14.06□□□□□ -0.16
U2AF1-209ENST00000475639 MORC1Q86VD1 984 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.06□□□□□ -0.16
U2AF1-209ENST00000475639 WWC1Q8IX03 1113 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 CHMP4CQ96CF2 233 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 GOLGA6L19H0YKK7 550 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 DYNC1I1O14576 645 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 SOX12O15370 315 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 PANK3Q9H999 370 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 ZNF500O60304 480 aaPredicted RBP14.06□□□□□ -0.16
U2AF1-209ENST00000475639 PDE3AQ14432 1141 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 EPRSP07814 1512 aaKnown RBP14.06□□□□□ -0.16
U2AF1-209ENST00000475639 CLASP1Q7Z460 1538 aa14.06□□□□□ -0.16
U2AF1-209ENST00000475639 PDZRN3Q9UPQ7 1066 aa14.05□□□□□ -0.16
U2AF1-209ENST00000475639 ZNF771Q7L3S4 317 aaPredicted RBP14.05□□□□□ -0.16
U2AF1-209ENST00000475639 STAC3Q96MF2 364 aa14.05□□□□□ -0.16
U2AF1-209ENST00000475639 HDGFP51858 240 aaKnown RBP14.05□□□□□ -0.16
U2AF1-209ENST00000475639 SKOR2Q2VWA4 1001 aaPredicted RBP14.05□□□□□ -0.16
U2AF1-209ENST00000475639 CFDP1Q9UEE9 299 aaPredicted RBP14.05□□□□□ -0.16
U2AF1-209ENST00000475639 CDR1P51861 262 aa14.04□□□□□ -0.16
U2AF1-209ENST00000475639 NOL7Q9UMY1 257 aaKnown RBP14.04□□□□□ -0.16
U2AF1-209ENST00000475639 RAD54L2Q9Y4B4 1467 aa14.04□□□□□ -0.16
U2AF1-209ENST00000475639 KIF16BQ96L93 1317 aa14.04□□□□□ -0.16
U2AF1-209ENST00000475639 MFAP1P55081 439 aaKnown RBP14.04□□□□□ -0.16
U2AF1-209ENST00000475639 TAF7LQ5H9L4 462 aa14.04□□□□□ -0.16
U2AF1-209ENST00000475639 TEX35Q5T0J7 233 aa14.04□□□□□ -0.16
U2AF1-209ENST00000475639 KRI1Q8N9T8 703 aaKnown RBP14.04□□□□□ -0.16
U2AF1-209ENST00000475639 CCDC94Q9BW85 323 aaPredicted RBP14.04□□□□□ -0.16
U2AF1-209ENST00000475639 ZNF330Q9Y3S2 320 aaPredicted RBP14.04□□□□□ -0.16
U2AF1-209ENST00000475639 PCDHB15Q9Y5E8 787 aa14.04□□□□□ -0.16
U2AF1-209ENST00000475639 NESP48681 1621 aa14.04□□□□□ -0.16
U2AF1-209ENST00000475639 STK31Q9BXU1 1019 aa14.03□□□□□ -0.16
U2AF1-209ENST00000475639 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
U2AF1-209ENST00000475639 CDK13Q14004 1512 aaKnown RBP14.03□□□□□ -0.16
U2AF1-209ENST00000475639 ST18O60284 1047 aa14.03□□□□□ -0.16
U2AF1-209ENST00000475639 DISP3Q9P2K9 1392 aa14.03□□□□□ -0.16
U2AF1-209ENST00000475639 TRIM6-TRIM34B2RNG4 842 aa14.03□□□□□ -0.16
U2AF1-209ENST00000475639 TOMM22Q9NS69 142 aa14.03□□□□□ -0.16
U2AF1-209ENST00000475639 COL17A1Q9UMD9 1497 aaPredicted RBP14.02□□□□□ -0.16
U2AF1-209ENST00000475639 RAB3GAP1Q15042 981 aa14.02□□□□□ -0.16
U2AF1-209ENST00000475639 ATP6V1DQ9Y5K8 247 aa14.02□□□□□ -0.16
U2AF1-209ENST00000475639 SRPK2P78362 688 aaKnown RBP14.02□□□□□ -0.16
U2AF1-209ENST00000475639 PMFBP1Q8TBY8 1022 aa14.02□□□□□ -0.16
U2AF1-209ENST00000475639 CCDC144AA2RUR9 1427 aa14.02□□□□□ -0.17
U2AF1-209ENST00000475639 HS1BP3Q53T59 392 aa14.02□□□□□ -0.17
U2AF1-209ENST00000475639 ABCA10Q8WWZ4 1543 aa14.02□□□□□ -0.17
U2AF1-209ENST00000475639 PDIA4P13667 645 aaKnown RBP14.02□□□□□ -0.17
U2AF1-209ENST00000475639 ITPRIPQ8IWB1 547 aa14.01□□□□□ -0.17
U2AF1-209ENST00000475639 PPP4R3BQ5MIZ7 849 aa14.01□□□□□ -0.17
U2AF1-209ENST00000475639 VPS53Q5VIR6 699 aa14.01□□□□□ -0.17
U2AF1-209ENST00000475639 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
U2AF1-209ENST00000475639 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
U2AF1-209ENST00000475639 SCAPERQ9BY12 1400 aa14□□□□□ -0.17
U2AF1-209ENST00000475639 PPP2R1AP30153 589 aa14□□□□□ -0.17
U2AF1-209ENST00000475639 IBTKQ9P2D0 1353 aaPredicted RBP14□□□□□ -0.17
U2AF1-209ENST00000475639 SMC5Q8IY18 1101 aa14□□□□□ -0.17
U2AF1-209ENST00000475639 NINLQ9Y2I6 1382 aa13.99□□□□□ -0.17
U2AF1-209ENST00000475639 CPLX2Q6PUV4 134 aaKnown RBP13.99□□□□□ -0.17
U2AF1-209ENST00000475639 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
U2AF1-209ENST00000475639 G3V3G9 751 aa13.98□□□□□ -0.17
U2AF1-209ENST00000475639 DCAF8Q5TAQ9 597 aa13.98□□□□□ -0.17
U2AF1-209ENST00000475639 PDLIM2Q96JY6 352 aa13.98□□□□□ -0.17
U2AF1-209ENST00000475639 TESK2Q96S53 571 aa13.98□□□□□ -0.17
U2AF1-209ENST00000475639 CHMP3Q9Y3E7 222 aa13.98□□□□□ -0.17
U2AF1-209ENST00000475639 DDX49Q9Y6V7 483 aaKnown RBP13.98□□□□□ -0.17
U2AF1-209ENST00000475639 CCDC191Q8NCU4 936 aa13.98□□□□□ -0.17
U2AF1-209ENST00000475639 CEP170Q5SW79 1584 aa13.98□□□□□ -0.17
U2AF1-209ENST00000475639 E9PSI1 815 aa13.98□□□□□ -0.17
U2AF1-209ENST00000475639 SASS6Q6UVJ0 657 aa13.98□□□□□ -0.17
U2AF1-209ENST00000475639 ANKRD20A12PQ8NF67 263 aa13.98□□□□□ -0.17
U2AF1-209ENST00000475639 APAF1O14727 1248 aa13.97□□□□□ -0.17
U2AF1-209ENST00000475639 U2AF1L5P0DN76 240 aaPredicted RBP13.97□□□□□ -0.17
U2AF1-209ENST00000475639 U2AF1Q01081 240 aaKnown RBP eCLIP13.97□□□□□ -0.17
U2AF1-209ENST00000475639 TRPM1Q7Z4N2 1603 aa13.97□□□□□ -0.17
U2AF1-209ENST00000475639 ZKSCAN5Q9Y2L8 839 aa13.97□□□□□ -0.17
U2AF1-209ENST00000475639 NBPF1Q3BBV0 1214 aa13.97□□□□□ -0.17
U2AF1-209ENST00000475639 ANKRD30AQ9BXX3 1397 aa13.96□□□□□ -0.17
U2AF1-209ENST00000475639 KIF20AO95235 890 aa13.96□□□□□ -0.17
U2AF1-209ENST00000475639 AKAP17AQ02040 695 aaKnown RBP13.96□□□□□ -0.17
U2AF1-209ENST00000475639 NOM1Q5C9Z4 860 aaKnown RBP13.96□□□□□ -0.17
U2AF1-209ENST00000475639 RLBP1P12271 317 aa13.96□□□□□ -0.17
U2AF1-209ENST00000475639 KLHL40Q2TBA0 621 aa13.96□□□□□ -0.17
U2AF1-209ENST00000475639 NOL8Q76FK4 1167 aaKnown RBP13.96□□□□□ -0.17
U2AF1-209ENST00000475639 SNX21Q969T3 373 aa13.96□□□□□ -0.17
U2AF1-209ENST00000475639 TMEM51Q9NW97 253 aa13.96□□□□□ -0.17
U2AF1-209ENST00000475639 TNNQ9UQP3 1299 aa13.96□□□□□ -0.17
U2AF1-209ENST00000475639 H3BQV1 296 aa13.96□□□□□ -0.18
U2AF1-209ENST00000475639 IFFO2Q5TF58 517 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms