RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 KCNK17Q96T54 332 aa7.11□□□□□ -1.27
TMEM39A-206ENST00000473684 GJA5P36382 358 aa7.11□□□□□ -1.27
TMEM39A-206ENST00000473684 MOXD2PA6NHM9 499 aa7.1□□□□□ -1.27
TMEM39A-206ENST00000473684 SMAPO00193 183 aa7.1□□□□□ -1.27
TMEM39A-206ENST00000473684 COG6Q9Y2V7 657 aa7.1□□□□□ -1.27
TMEM39A-206ENST00000473684 RAD21O60216 631 aa7.09□□□□□ -1.27
TMEM39A-206ENST00000473684 URB2Q14146 1524 aaKnown RBP7.09□□□□□ -1.27
TMEM39A-206ENST00000473684 ZBED2Q9BTP6 218 aa7.09□□□□□ -1.27
TMEM39A-206ENST00000473684 WIZO95785 1651 aa7.09□□□□□ -1.27
TMEM39A-206ENST00000473684 NDUFV2P19404 249 aa7.09□□□□□ -1.28
TMEM39A-206ENST00000473684 CCDC82Q8N4S0 544 aa7.09□□□□□ -1.28
TMEM39A-206ENST00000473684 KIAA1468Q9P260 1216 aa7.09□□□□□ -1.28
TMEM39A-206ENST00000473684 C11orf95C9JLR9 678 aaPredicted RBP7.08□□□□□ -1.28
TMEM39A-206ENST00000473684 LILRB3O75022 631 aa7.08□□□□□ -1.28
TMEM39A-206ENST00000473684 QPCTQ16769 361 aa7.08□□□□□ -1.28
TMEM39A-206ENST00000473684 ABCA5Q8WWZ7 1642 aa7.07□□□□□ -1.28
TMEM39A-206ENST00000473684 RDH13Q8NBN7 331 aa7.07□□□□□ -1.28
TMEM39A-206ENST00000473684 ZNF777Q9ULD5 760 aaPredicted RBP7.07□□□□□ -1.28
TMEM39A-206ENST00000473684 FANCD2Q9BXW9 1451 aa7.07□□□□□ -1.28
TMEM39A-206ENST00000473684 PCDHB15Q9Y5E8 787 aa7.07□□□□□ -1.28
TMEM39A-206ENST00000473684 KDM4AO75164 1064 aa7.06□□□□□ -1.28
TMEM39A-206ENST00000473684 CSPP1Q1MSJ5 1256 aa7.06□□□□□ -1.28
TMEM39A-206ENST00000473684 RTL5Q5HYW3 569 aaPredicted RBP7.06□□□□□ -1.28
TMEM39A-206ENST00000473684 MTMR14Q8NCE2 650 aa7.06□□□□□ -1.28
TMEM39A-206ENST00000473684 KCNH8Q96L42 1107 aa7.06□□□□□ -1.28
TMEM39A-206ENST00000473684 SOCS7O14512 581 aa7.06□□□□□ -1.28
TMEM39A-206ENST00000473684 GCGRP47871 477 aa7.06□□□□□ -1.28
TMEM39A-206ENST00000473684 PSEN2P49810 448 aa7.06□□□□□ -1.28
TMEM39A-206ENST00000473684 PDE4CQ08493 712 aa7.06□□□□□ -1.28
TMEM39A-206ENST00000473684 PRPF38BQ5VTL8 546 aaKnown RBP7.05□□□□□ -1.28
TMEM39A-206ENST00000473684 CDK11AQ9UQ88 783 aaPredicted RBP7.05□□□□□ -1.28
TMEM39A-206ENST00000473684 BIVM-ERCC5R4GMW8 1640 aa7.05□□□□□ -1.28
TMEM39A-206ENST00000473684 SYNJ1O43426 1573 aa7.05□□□□□ -1.28
TMEM39A-206ENST00000473684 ARHGEF11O15085 1522 aa7.05□□□□□ -1.28
TMEM39A-206ENST00000473684 USP46P62068 366 aa7.05□□□□□ -1.28
TMEM39A-206ENST00000473684 OTUD5Q96G74 571 aa7.05□□□□□ -1.28
TMEM39A-206ENST00000473684 SLC4A5Q9BY07 1137 aa7.05□□□□□ -1.28
TMEM39A-206ENST00000473684 MAGI1Q96QZ7 1491 aaPredicted RBP7.05□□□□□ -1.28
TMEM39A-206ENST00000473684 RABGEF1Q9UJ41 708 aa7.04□□□□□ -1.28
TMEM39A-206ENST00000473684 NOP58Q9Y2X3 529 aaKnown RBP7.04□□□□□ -1.28
TMEM39A-206ENST00000473684 HOXA2O43364 376 aa7.04□□□□□ -1.28
TMEM39A-206ENST00000473684 SLC10A3P09131 477 aa7.04□□□□□ -1.28
TMEM39A-206ENST00000473684 RSPH4AQ5TD94 716 aa7.04□□□□□ -1.28
TMEM39A-206ENST00000473684 KIF13AQ9H1H9 1805 aa7.03□□□□□ -1.28
TMEM39A-206ENST00000473684 ARHGAP33O14559 1287 aa7.03□□□□□ -1.28
TMEM39A-206ENST00000473684 PDIA4P13667 645 aaKnown RBP7.03□□□□□ -1.28
TMEM39A-206ENST00000473684 FGD1P98174 961 aa7.03□□□□□ -1.28
TMEM39A-206ENST00000473684 SWT1Q5T5J6 900 aaKnown RBP7.03□□□□□ -1.28
TMEM39A-206ENST00000473684 POTEEQ6S8J3 1075 aa7.03□□□□□ -1.28
TMEM39A-206ENST00000473684 CABLES1Q8TDN4 633 aa7.03□□□□□ -1.28
TMEM39A-206ENST00000473684 AP1G2O75843 785 aa7.03□□□□□ -1.28
TMEM39A-206ENST00000473684 NUTM2BA6NNL0 878 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 NUTM2EB1AL46 878 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 RANGAP1P46060 587 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 NUTM2DQ5VT03 806 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 NUTM2AQ8IVF1 878 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 GDPD2Q9HCC8 539 aa7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 ZBTB3Q9H5J0 574 aa7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 PLSCR2Q9NRY7 297 aa7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 PCDHGC3Q9UN70 934 aa7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 ZNF330Q9Y3S2 320 aaPredicted RBP7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 TOPBP1Q92547 1522 aa7.02□□□□□ -1.29
TMEM39A-206ENST00000473684 DMRTA1Q5VZB9 504 aa7.01□□□□□ -1.29
TMEM39A-206ENST00000473684 SEPT9Q9UHD8 586 aaPredicted RBP7.01□□□□□ -1.29
TMEM39A-206ENST00000473684 USP17L8P0C7I0 530 aa7.01□□□□□ -1.29
TMEM39A-206ENST00000473684 FDX1P10109 184 aa7.01□□□□□ -1.29
TMEM39A-206ENST00000473684 VARS2Q5ST30 1063 aaKnown RBP7.01□□□□□ -1.29
TMEM39A-206ENST00000473684 SERPINA10Q9UK55 444 aa7.01□□□□□ -1.29
TMEM39A-206ENST00000473684 ERBB3P21860 1342 aa7□□□□□ -1.29
TMEM39A-206ENST00000473684 GUCA2AQ02747 115 aa7□□□□□ -1.29
TMEM39A-206ENST00000473684 AAMPQ13685 434 aa7□□□□□ -1.29
TMEM39A-206ENST00000473684 FAM98CQ17RN3 349 aaKnown RBP7□□□□□ -1.29
TMEM39A-206ENST00000473684 HLA-CQ95604 372 aa7□□□□□ -1.29
TMEM39A-206ENST00000473684 AXIN2Q9Y2T1 843 aa6.99□□□□□ -1.29
TMEM39A-206ENST00000473684 WASHC2AQ641Q2 1341 aa6.99□□□□□ -1.29
TMEM39A-206ENST00000473684 CCDC97Q96F63 343 aaPredicted RBP6.99□□□□□ -1.29
TMEM39A-206ENST00000473684 TBC1D2BQ9UPU7 963 aa6.99□□□□□ -1.29
TMEM39A-206ENST00000473684 VPS9D1Q9Y2B5 631 aa6.99□□□□□ -1.29
TMEM39A-206ENST00000473684 WASHC2CQ9Y4E1 1318 aa6.99□□□□□ -1.29
TMEM39A-206ENST00000473684 HDGFP51858 240 aaKnown RBP6.98□□□□□ -1.29
TMEM39A-206ENST00000473684 GJD4Q96KN9 370 aaPredicted RBP6.98□□□□□ -1.29
TMEM39A-206ENST00000473684 PRM3Q9NNZ6 103 aa6.98□□□□□ -1.29
TMEM39A-206ENST00000473684 PBX2P40425 430 aa6.98□□□□□ -1.29
TMEM39A-206ENST00000473684 USP35Q9P2H5 1018 aa6.98□□□□□ -1.29
TMEM39A-206ENST00000473684 ABL2P42684 1182 aa6.98□□□□□ -1.29
TMEM39A-206ENST00000473684 MTMR2Q13614 643 aa6.97□□□□□ -1.29
TMEM39A-206ENST00000473684 SLF2Q8IX21 1173 aa6.97□□□□□ -1.29
TMEM39A-206ENST00000473684 SAMD7Q7Z3H4 446 aa6.97□□□□□ -1.29
TMEM39A-206ENST00000473684 LAPTM4BQ86VI4 370 aa6.97□□□□□ -1.29
TMEM39A-206ENST00000473684 WWC1Q8IX03 1113 aa6.97□□□□□ -1.29
TMEM39A-206ENST00000473684 MAPKBP1O60336 1514 aa6.96□□□□□ -1.29
TMEM39A-206ENST00000473684 SLC4A3P48751 1232 aa6.96□□□□□ -1.29
TMEM39A-206ENST00000473684 RBM10P98175 930 aaKnown RBP6.96□□□□□ -1.29
TMEM39A-206ENST00000473684 CTDSPL2Q05D32 466 aa6.96□□□□□ -1.29
TMEM39A-206ENST00000473684 GLI2P10070 1586 aa6.96□□□□□ -1.3
TMEM39A-206ENST00000473684 ITGAEP38570 1179 aa6.96□□□□□ -1.3
TMEM39A-206ENST00000473684 FUT2Q10981 343 aa6.96□□□□□ -1.3
TMEM39A-206ENST00000473684 BHMG1C9JSJ3 638 aaPredicted RBP6.95□□□□□ -1.3
TMEM39A-206ENST00000473684 ST18O60284 1047 aa6.95□□□□□ -1.3
TMEM39A-206ENST00000473684 ZNF687Q8N1G0 1237 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms