RNA–Protein interactions for RNA: ENST00000473657.1

PHACTR3-207, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2

Gene PHACTR3, Length 2,408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-207ENST00000473657 KNDC1Q76NI1 1749 aa11.99□□□□□ -0.49
PHACTR3-207ENST00000473657 ATAD2Q6PL18 1390 aa11.98□□□□□ -0.49
PHACTR3-207ENST00000473657 IRX6P78412 446 aaPredicted RBP11.98□□□□□ -0.49
PHACTR3-207ENST00000473657 ESF1Q9H501 851 aaKnown RBP11.98□□□□□ -0.49
PHACTR3-207ENST00000473657 ABCC11Q96J66 1382 aa11.98□□□□□ -0.49
PHACTR3-207ENST00000473657 SHPRHQ149N8 1683 aa11.98□□□□□ -0.49
PHACTR3-207ENST00000473657 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.98□□□□□ -0.49
PHACTR3-207ENST00000473657 PRAM1Q96QH2 718 aa11.98□□□□□ -0.49
PHACTR3-207ENST00000473657 PPP4R2Q9NY27 417 aa11.98□□□□□ -0.49
PHACTR3-207ENST00000473657 STK26Q9P289 416 aa11.98□□□□□ -0.49
PHACTR3-207ENST00000473657 WDR43Q15061 677 aaKnown RBP eCLIP11.97□□□□□ -0.49
PHACTR3-207ENST00000473657 CGNL1Q0VF96 1302 aa11.97□□□□□ -0.49
PHACTR3-207ENST00000473657 CD163L1Q9NR16 1453 aa11.97□□□□□ -0.49
PHACTR3-207ENST00000473657 NLRP1Q9C000 1473 aa11.96□□□□□ -0.49
PHACTR3-207ENST00000473657 ANKRD26Q9UPS8 1709 aa11.96□□□□□ -0.49
PHACTR3-207ENST00000473657 SENP3-EIF4A1A0A087X0R7 540 aa11.96□□□□□ -0.49
PHACTR3-207ENST00000473657 CABP2Q9NPB3 220 aa11.96□□□□□ -0.49
PHACTR3-207ENST00000473657 ZNF521Q96K83 1311 aa11.96□□□□□ -0.49
PHACTR3-207ENST00000473657 TECPR2O15040 1411 aa11.96□□□□□ -0.5
PHACTR3-207ENST00000473657 MED14O60244 1454 aa11.95□□□□□ -0.5
PHACTR3-207ENST00000473657 A0A1W2PP64 1363 aa11.95□□□□□ -0.5
PHACTR3-207ENST00000473657 TMEM2Q9UHN6 1383 aa11.95□□□□□ -0.5
PHACTR3-207ENST00000473657 C3P01024 1663 aa11.95□□□□□ -0.5
PHACTR3-207ENST00000473657 CPS1P31327 1500 aa11.94□□□□□ -0.5
PHACTR3-207ENST00000473657 POGKQ9P215 609 aa11.94□□□□□ -0.5
PHACTR3-207ENST00000473657 PLEKHH1Q9ULM0 1364 aa11.94□□□□□ -0.5
PHACTR3-207ENST00000473657 SAFB2Q14151 953 aaKnown RBP eCLIP11.94□□□□□ -0.5
PHACTR3-207ENST00000473657 MORC1Q86VD1 984 aa11.94□□□□□ -0.5
PHACTR3-207ENST00000473657 TSHZ2Q9NRE2 1034 aa11.94□□□□□ -0.5
PHACTR3-207ENST00000473657 FAM135BQ49AJ0 1406 aa11.93□□□□□ -0.5
PHACTR3-207ENST00000473657 METP08581 1390 aa11.93□□□□□ -0.5
PHACTR3-207ENST00000473657 MINK1Q8N4C8 1332 aaPredicted RBP11.93□□□□□ -0.5
PHACTR3-207ENST00000473657 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
PHACTR3-207ENST00000473657 SIRT1Q96EB6 747 aa11.93□□□□□ -0.5
PHACTR3-207ENST00000473657 CDCA7LQ96GN5 454 aa11.93□□□□□ -0.5
PHACTR3-207ENST00000473657 FER1L4A9Z1Z3 1794 aa11.93□□□□□ -0.5
PHACTR3-207ENST00000473657 SRPK2P78362 688 aaKnown RBP11.92□□□□□ -0.5
PHACTR3-207ENST00000473657 SALL2Q9Y467 1007 aaPredicted RBP11.92□□□□□ -0.5
PHACTR3-207ENST00000473657 ATP7BP35670 1465 aa11.92□□□□□ -0.5
PHACTR3-207ENST00000473657 NGEFQ8N5V2 710 aa11.91□□□□□ -0.5
PHACTR3-207ENST00000473657 RCAN3Q9UKA8 241 aa11.91□□□□□ -0.5
PHACTR3-207ENST00000473657 CDK19Q9BWU1 502 aa11.91□□□□□ -0.5
PHACTR3-207ENST00000473657 SENP3Q9H4L4 574 aaPredicted RBP11.91□□□□□ -0.5
PHACTR3-207ENST00000473657 ADAMTS13Q76LX8 1427 aa11.91□□□□□ -0.5
PHACTR3-207ENST00000473657 KIF20BQ96Q89 1820 aa11.9□□□□□ -0.5
PHACTR3-207ENST00000473657 SLIT1O75093 1534 aa11.9□□□□□ -0.5
PHACTR3-207ENST00000473657 RRP1P56182 461 aaKnown RBP11.9□□□□□ -0.5
PHACTR3-207ENST00000473657 TERF2IPQ9NYB0 399 aa11.9□□□□□ -0.5
PHACTR3-207ENST00000473657 ARHGAP23Q9P227 1491 aa11.9□□□□□ -0.5
PHACTR3-207ENST00000473657 PLEKHG1Q9ULL1 1385 aa11.9□□□□□ -0.51
PHACTR3-207ENST00000473657 IQSEC2Q5JU85 1478 aa11.88□□□□□ -0.51
PHACTR3-207ENST00000473657 ADGRB2O60241 1585 aa11.88□□□□□ -0.51
PHACTR3-207ENST00000473657 WAPLQ7Z5K2 1190 aa11.88□□□□□ -0.51
PHACTR3-207ENST00000473657 TRMT2AQ8IZ69 625 aaKnown RBP11.88□□□□□ -0.51
PHACTR3-207ENST00000473657 DUSP27Q5VZP5 1158 aa11.88□□□□□ -0.51
PHACTR3-207ENST00000473657 COL3A1P02461 1466 aaPredicted RBP11.88□□□□□ -0.51
PHACTR3-207ENST00000473657 MTHFSP49914 203 aa11.87□□□□□ -0.51
PHACTR3-207ENST00000473657 FYB1O15117 783 aa11.87□□□□□ -0.51
PHACTR3-207ENST00000473657 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
PHACTR3-207ENST00000473657 CPSF1Q10570 1443 aaKnown RBP11.86□□□□□ -0.51
PHACTR3-207ENST00000473657 APAF1O14727 1248 aa11.86□□□□□ -0.51
PHACTR3-207ENST00000473657 HDGFL2Q7Z4V5 671 aaPredicted RBP11.86□□□□□ -0.51
PHACTR3-207ENST00000473657 CCDC146Q8IYE0 955 aa11.86□□□□□ -0.51
PHACTR3-207ENST00000473657 WASLO00401 505 aaPredicted RBP11.86□□□□□ -0.51
PHACTR3-207ENST00000473657 SLFN5Q08AF3 891 aa11.86□□□□□ -0.51
PHACTR3-207ENST00000473657 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
PHACTR3-207ENST00000473657 CFAP53Q96M91 514 aa11.86□□□□□ -0.51
PHACTR3-207ENST00000473657 CABP1Q9NZU7 370 aa11.86□□□□□ -0.51
PHACTR3-207ENST00000473657 MON2Q7Z3U7 1717 aa11.85□□□□□ -0.51
PHACTR3-207ENST00000473657 B4GALNT3Q6L9W6 998 aa11.85□□□□□ -0.51
PHACTR3-207ENST00000473657 CDC42BPGQ6DT37 1551 aa11.85□□□□□ -0.51
PHACTR3-207ENST00000473657 LTKP29376 864 aa11.85□□□□□ -0.51
PHACTR3-207ENST00000473657 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
PHACTR3-207ENST00000473657 AKAP12Q02952 1782 aa11.84□□□□□ -0.51
PHACTR3-207ENST00000473657 DIP2AQ14689 1571 aa11.84□□□□□ -0.51
PHACTR3-207ENST00000473657 CEBPAP49715 358 aaPredicted RBP11.84□□□□□ -0.51
PHACTR3-207ENST00000473657 PHF23Q9BUL5 403 aaPredicted RBP11.84□□□□□ -0.51
PHACTR3-207ENST00000473657 ROBO2Q9HCK4 1378 aa11.84□□□□□ -0.51
PHACTR3-207ENST00000473657 TXNDC2Q86VQ3 553 aa11.84□□□□□ -0.51
PHACTR3-207ENST00000473657 RUNDC1Q96C34 613 aa11.84□□□□□ -0.51
PHACTR3-207ENST00000473657 TOPAZ1Q8N9V7 1692 aa11.83□□□□□ -0.51
PHACTR3-207ENST00000473657 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.83□□□□□ -0.52
PHACTR3-207ENST00000473657 PNPLA6Q8IY17 1366 aa11.83□□□□□ -0.52
PHACTR3-207ENST00000473657 EDC4Q6P2E9 1401 aaKnown RBP11.83□□□□□ -0.52
PHACTR3-207ENST00000473657 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.52
PHACTR3-207ENST00000473657 PPIP5K1Q6PFW1 1433 aa11.83□□□□□ -0.52
PHACTR3-207ENST00000473657 NKTRP30414 1462 aaKnown RBP11.82□□□□□ -0.52
PHACTR3-207ENST00000473657 ITSN1Q15811 1721 aa11.82□□□□□ -0.52
PHACTR3-207ENST00000473657 E9PSI1 815 aa11.81□□□□□ -0.52
PHACTR3-207ENST00000473657 PTPRUQ92729 1446 aa11.81□□□□□ -0.52
PHACTR3-207ENST00000473657 CCDC27Q2M243 656 aa11.81□□□□□ -0.52
PHACTR3-207ENST00000473657 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
PHACTR3-207ENST00000473657 WWC1Q8IX03 1113 aa11.8□□□□□ -0.52
PHACTR3-207ENST00000473657 SPINK5Q9NQ38 1064 aaPredicted RBP11.8□□□□□ -0.52
PHACTR3-207ENST00000473657 PTCH1Q13635 1447 aa11.8□□□□□ -0.52
PHACTR3-207ENST00000473657 NRKQ7Z2Y5 1582 aa11.8□□□□□ -0.52
PHACTR3-207ENST00000473657 NUDT16Q96DE0 195 aaKnown RBP11.8□□□□□ -0.52
PHACTR3-207ENST00000473657 EID1Q9Y6B2 187 aa11.8□□□□□ -0.52
PHACTR3-207ENST00000473657 XRN1Q8IZH2 1706 aaKnown RBP11.79□□□□□ -0.52
PHACTR3-207ENST00000473657 CEP170BQ9Y4F5 1589 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms