RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 KRI1Q8N9T8 703 aaKnown RBP8.96□□□□□ -0.98
SMNDC1-204ENST00000471297 RAB3GAP2Q9H2M9 1393 aa8.96□□□□□ -0.98
SMNDC1-204ENST00000471297 FECHP22830 423 aa8.95□□□□□ -0.98
SMNDC1-204ENST00000471297 PBX2P40425 430 aa8.95□□□□□ -0.98
SMNDC1-204ENST00000471297 ZNF777Q9ULD5 760 aaPredicted RBP8.95□□□□□ -0.98
SMNDC1-204ENST00000471297 ROCK1Q13464 1354 aa8.95□□□□□ -0.98
SMNDC1-204ENST00000471297 PTPRKQ15262 1439 aa8.95□□□□□ -0.98
SMNDC1-204ENST00000471297 AKNAQ7Z591 1439 aa8.95□□□□□ -0.98
SMNDC1-204ENST00000471297 POTEMA6NI47 508 aa8.94□□□□□ -0.98
SMNDC1-204ENST00000471297 PRSS12P56730 875 aa8.94□□□□□ -0.98
SMNDC1-204ENST00000471297 POTEGQ6S5H5 508 aa8.94□□□□□ -0.98
SMNDC1-204ENST00000471297 CDCA7LQ96GN5 454 aa8.94□□□□□ -0.98
SMNDC1-204ENST00000471297 ZNF644Q9H582 1327 aaPredicted RBP8.94□□□□□ -0.98
SMNDC1-204ENST00000471297 HFM1A2PYH4 1435 aa8.94□□□□□ -0.98
SMNDC1-204ENST00000471297 ABCC5O15440 1437 aa8.94□□□□□ -0.98
SMNDC1-204ENST00000471297 DAPK1P53355 1430 aa8.94□□□□□ -0.98
SMNDC1-204ENST00000471297 CAMSAP2Q08AD1 1489 aa8.94□□□□□ -0.98
SMNDC1-204ENST00000471297 DMRTA1Q5VZB9 504 aa8.93□□□□□ -0.98
SMNDC1-204ENST00000471297 PLCH2O75038 1416 aa8.93□□□□□ -0.98
SMNDC1-204ENST00000471297 WDR7Q9Y4E6 1490 aa8.93□□□□□ -0.98
SMNDC1-204ENST00000471297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.93□□□□□ -0.98
SMNDC1-204ENST00000471297 PLEKHH2Q8IVE3 1493 aa8.92□□□□□ -0.98
SMNDC1-204ENST00000471297 DHX57Q6P158 1386 aaKnown RBP8.92□□□□□ -0.98
SMNDC1-204ENST00000471297 TSPY4P0CV99 314 aa8.92□□□□□ -0.98
SMNDC1-204ENST00000471297 TSPY10P0CW01 314 aa8.92□□□□□ -0.98
SMNDC1-204ENST00000471297 EFCAB2Q5VUJ9 269 aa8.92□□□□□ -0.98
SMNDC1-204ENST00000471297 ZBED2Q9BTP6 218 aa8.92□□□□□ -0.98
SMNDC1-204ENST00000471297 CDC42BPAQ5VT25 1732 aa8.91□□□□□ -0.98
SMNDC1-204ENST00000471297 DNMT1P26358 1616 aaKnown RBP8.91□□□□□ -0.98
SMNDC1-204ENST00000471297 NAIPQ13075 1403 aa8.91□□□□□ -0.98
SMNDC1-204ENST00000471297 ASXL2Q76L83 1435 aa8.91□□□□□ -0.98
SMNDC1-204ENST00000471297 MINK1Q8N4C8 1332 aaPredicted RBP8.91□□□□□ -0.98
SMNDC1-204ENST00000471297 PADI6Q6TGC4 694 aa8.91□□□□□ -0.98
SMNDC1-204ENST00000471297 SLC24A3Q9HC58 644 aa8.91□□□□□ -0.98
SMNDC1-204ENST00000471297 CHIC2Q9UKJ5 165 aa8.91□□□□□ -0.98
SMNDC1-204ENST00000471297 KIAA1107Q9UPP5 1409 aa8.9□□□□□ -0.98
SMNDC1-204ENST00000471297 PROX2Q3B8N5 592 aa8.9□□□□□ -0.98
SMNDC1-204ENST00000471297 CYB5RLQ6IPT4 315 aa8.9□□□□□ -0.98
SMNDC1-204ENST00000471297 RRP7BPQ9NSQ0 103 aa8.9□□□□□ -0.98
SMNDC1-204ENST00000471297 RBM27Q9P2N5 1060 aaKnown RBP8.9□□□□□ -0.98
SMNDC1-204ENST00000471297 PREX2Q70Z35 1606 aa8.9□□□□□ -0.99
SMNDC1-204ENST00000471297 ARAP3Q8WWN8 1544 aa8.9□□□□□ -0.99
SMNDC1-204ENST00000471297 ANKRD30AQ9BXX3 1397 aa8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 TRIM6-TRIM34B2RNG4 842 aa8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 IRF6O14896 467 aa8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 ONECUT3O60422 494 aaPredicted RBP8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 HNRNPMP52272 730 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 MAP2K5Q13163 448 aa8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 TTC13Q8NBP0 860 aa8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 SLC4A5Q9BY07 1137 aa8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 FAM198AQ9UFP1 575 aa8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 TSKSQ9UJT2 592 aa8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 ARHGAP5Q13017 1502 aa8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 ADGRL2O95490 1459 aa8.89□□□□□ -0.99
SMNDC1-204ENST00000471297 RIMBP3CA6NJZ7 1639 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 RIMBP3BA6NNM3 1639 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 RIMBP3Q9UFD9 1639 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 ARHGEF5Q12774 1597 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 TTC37Q6PGP7 1564 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 PACS2Q86VP3 889 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 CDAN1Q8IWY9 1227 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 MBD5Q9P267 1494 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 SHANK2Q9UPX8 1470 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 MYO5CQ9NQX4 1742 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 NCOA1Q15788 1441 aa8.88□□□□□ -0.99
SMNDC1-204ENST00000471297 LSM11P83369 360 aaKnown RBP eCLIP8.87□□□□□ -0.99
SMNDC1-204ENST00000471297 ANKRD13DQ6ZTN6 518 aa8.87□□□□□ -0.99
SMNDC1-204ENST00000471297 AK7Q96M32 723 aa8.87□□□□□ -0.99
SMNDC1-204ENST00000471297 KIAA1468Q9P260 1216 aa8.87□□□□□ -0.99
SMNDC1-204ENST00000471297 VPS9D1Q9Y2B5 631 aa8.87□□□□□ -0.99
SMNDC1-204ENST00000471297 CDC42BPBQ9Y5S2 1711 aa8.87□□□□□ -0.99
SMNDC1-204ENST00000471297 ABCA9Q8IUA7 1624 aa8.87□□□□□ -0.99
SMNDC1-204ENST00000471297 SAMD9LQ8IVG5 1584 aa8.86□□□□□ -0.99
SMNDC1-204ENST00000471297 CCDC141Q6ZP82 1450 aa8.86□□□□□ -0.99
SMNDC1-204ENST00000471297 FAM161AQ3B820 660 aa8.86□□□□□ -0.99
SMNDC1-204ENST00000471297 GCC2Q8IWJ2 1684 aa8.85□□□□□ -0.99
SMNDC1-204ENST00000471297 TK2O00142 265 aa8.85□□□□□ -0.99
SMNDC1-204ENST00000471297 RABGEF1Q9UJ41 708 aa8.85□□□□□ -0.99
SMNDC1-204ENST00000471297 C9orf84Q5VXU9 1444 aa8.85□□□□□ -0.99
SMNDC1-204ENST00000471297 MAPKBP1O60336 1514 aa8.85□□□□□ -0.99
SMNDC1-204ENST00000471297 OATP04181 439 aa8.84□□□□□ -0.99
SMNDC1-204ENST00000471297 NUDT18Q6ZVK8 323 aa8.84□□□□□ -0.99
SMNDC1-204ENST00000471297 TATDN2Q93075 761 aa8.84□□□□□ -0.99
SMNDC1-204ENST00000471297 TRIM52Q96A61 297 aa8.84□□□□□ -0.99
SMNDC1-204ENST00000471297 KRTAP3-3Q9BYR6 98 aa8.84□□□□□ -0.99
SMNDC1-204ENST00000471297 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
SMNDC1-204ENST00000471297 PNMA3Q9UL41 463 aa8.84□□□□□ -0.99
SMNDC1-204ENST00000471297 ADGRG1Q9Y653 693 aa8.84□□□□□ -0.99
SMNDC1-204ENST00000471297 CD109Q6YHK3 1445 aa8.83□□□□□ -1
SMNDC1-204ENST00000471297 C3orf80F5H4A9 247 aa8.83□□□□□ -1
SMNDC1-204ENST00000471297 ADGRD1Q6QNK2 874 aa8.83□□□□□ -1
SMNDC1-204ENST00000471297 CCDC102AQ96A19 550 aa8.83□□□□□ -1
SMNDC1-204ENST00000471297 TIMELESSQ9UNS1 1208 aa8.83□□□□□ -1
SMNDC1-204ENST00000471297 CROCC2H7BZ55 1655 aa8.83□□□□□ -1
SMNDC1-204ENST00000471297 ADGBQ8N7X0 1667 aa8.83□□□□□ -1
SMNDC1-204ENST00000471297 FANCAO15360 1455 aa8.83□□□□□ -1
SMNDC1-204ENST00000471297 MAST1Q9Y2H9 1570 aa8.82□□□□□ -1
SMNDC1-204ENST00000471297 SYCP2Q9BX26 1530 aa8.82□□□□□ -1
SMNDC1-204ENST00000471297 RBM46Q8TBY0 533 aaKnown RBP8.82□□□□□ -1
SMNDC1-204ENST00000471297 RTEL1-TNFRSF6BF6WH68 1400 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms