RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 MRS2Q9HD23 443 aa35.38■■■■□ 3.25
U2AF1-208ENST00000471250 MINK1Q8N4C8 1332 aaPredicted RBP35.38■■■■□ 3.25
U2AF1-208ENST00000471250 FAM135BQ49AJ0 1406 aa35.37■■■■□ 3.25
U2AF1-208ENST00000471250 DIP2AQ14689 1571 aa35.36■■■■□ 3.25
U2AF1-208ENST00000471250 MYBBP1AQ9BQG0 1328 aaKnown RBP35.36■■■■□ 3.25
U2AF1-208ENST00000471250 WAPLQ7Z5K2 1190 aa35.35■■■■□ 3.25
U2AF1-208ENST00000471250 TBX22Q9Y458 520 aa35.35■■■■□ 3.25
U2AF1-208ENST00000471250 PLEKHH1Q9ULM0 1364 aa35.35■■■■□ 3.25
U2AF1-208ENST00000471250 CABP2Q9NPB3 220 aa35.33■■■■□ 3.25
U2AF1-208ENST00000471250 NPC1L1Q9UHC9 1359 aa35.33■■■■□ 3.25
U2AF1-208ENST00000471250 AMER1Q5JTC6 1135 aaPredicted RBP35.32■■■■□ 3.24
U2AF1-208ENST00000471250 CC2D1BQ5T0F9 858 aaKnown RBP35.32■■■■□ 3.24
U2AF1-208ENST00000471250 SLC26A8Q96RN1 970 aa35.31■■■■□ 3.24
U2AF1-208ENST00000471250 TMC1Q8TDI8 760 aa35.3■■■■□ 3.24
U2AF1-208ENST00000471250 SLC12A5Q9H2X9 1139 aa35.3■■■■□ 3.24
U2AF1-208ENST00000471250 ATAD2Q6PL18 1390 aa35.28■■■■□ 3.24
U2AF1-208ENST00000471250 SRPK2P78362 688 aaKnown RBP35.28■■■■□ 3.24
U2AF1-208ENST00000471250 CARD14Q9BXL6 1004 aa35.28■■■■□ 3.24
U2AF1-208ENST00000471250 NINLQ9Y2I6 1382 aa35.28■■■■□ 3.24
U2AF1-208ENST00000471250 BRD4O60885 1362 aaPredicted RBP35.27■■■■□ 3.24
U2AF1-208ENST00000471250 PTPRUQ92729 1446 aa35.27■■■■□ 3.24
U2AF1-208ENST00000471250 ANKLE2Q86XL3 938 aa35.26■■■■□ 3.23
U2AF1-208ENST00000471250 CDK19Q9BWU1 502 aa35.26■■■■□ 3.23
U2AF1-208ENST00000471250 ROBO2Q9HCK4 1378 aa35.24■■■■□ 3.23
U2AF1-208ENST00000471250 NLRP13Q86W25 1043 aa35.22■■■■□ 3.23
U2AF1-208ENST00000471250 ANKRD36BQ8N2N9 1353 aa35.21■■■■□ 3.23
U2AF1-208ENST00000471250 NSD3Q9BZ95 1437 aa35.18■■■■□ 3.22
U2AF1-208ENST00000471250 PIK3R4Q99570 1358 aa35.18■■■■□ 3.22
U2AF1-208ENST00000471250 USP32Q8NFA0 1604 aa35.18■■■■□ 3.22
U2AF1-208ENST00000471250 FAM9BQ8IZU0 186 aa35.17■■■■□ 3.22
U2AF1-208ENST00000471250 AMOTL2Q9Y2J4 779 aa35.17■■■■□ 3.22
U2AF1-208ENST00000471250 WASLO00401 505 aaPredicted RBP35.16■■■■□ 3.22
U2AF1-208ENST00000471250 PTCH1Q13635 1447 aa35.15■■■■□ 3.22
U2AF1-208ENST00000471250 XRN1Q8IZH2 1706 aaKnown RBP35.15■■■■□ 3.22
U2AF1-208ENST00000471250 ADGRB2O60241 1585 aa35.14■■■■□ 3.22
U2AF1-208ENST00000471250 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.13■■■■□ 3.21
U2AF1-208ENST00000471250 PNISRQ8TF01 805 aaKnown RBP35.12■■■■□ 3.21
U2AF1-208ENST00000471250 CD163L1Q9NR16 1453 aa35.09■■■■□ 3.21
U2AF1-208ENST00000471250 A0A1W2PP64 1363 aa35.09■■■■□ 3.21
U2AF1-208ENST00000471250 PPP2R1AP30153 589 aa35.08■■■■□ 3.21
U2AF1-208ENST00000471250 TERF2IPQ9NYB0 399 aa35.08■■■■□ 3.21
U2AF1-208ENST00000471250 NPHP4O75161 1426 aaPredicted RBP35.06■■■■□ 3.2
U2AF1-208ENST00000471250 HNRNPUQ00839 825 aaKnown RBP eCLIP35.05■■■■□ 3.2
U2AF1-208ENST00000471250 CGNL1Q0VF96 1302 aa35.05■■■■□ 3.2
U2AF1-208ENST00000471250 CABP1Q9NZU7 370 aa35.05■■■■□ 3.2
U2AF1-208ENST00000471250 CHD2O14647 1828 aaKnown RBP35.04■■■■□ 3.2
U2AF1-208ENST00000471250 ATP7BP35670 1465 aa35.03■■■■□ 3.2
U2AF1-208ENST00000471250 HDGFL2Q7Z4V5 671 aaPredicted RBP35.02■■■■□ 3.2
U2AF1-208ENST00000471250 NSD2O96028 1365 aa35.02■■■■□ 3.2
U2AF1-208ENST00000471250 NUDT16Q96DE0 195 aaKnown RBP35■■■■□ 3.19
U2AF1-208ENST00000471250 KCNA6P17658 529 aa34.98■■■■□ 3.19
U2AF1-208ENST00000471250 PPIP5K1Q6PFW1 1433 aa34.97■■■■□ 3.19
U2AF1-208ENST00000471250 KDM4FA0A1W2PPD8 638 aa34.97■■■■□ 3.19
U2AF1-208ENST00000471250 NCKAP5LQ9HCH0 1330 aa34.97■■■■□ 3.19
U2AF1-208ENST00000471250 MORC1Q86VD1 984 aa34.95■■■■□ 3.19
U2AF1-208ENST00000471250 CCDC61Q9Y6R9 512 aa34.95■■■■□ 3.19
U2AF1-208ENST00000471250 PRR36Q9H6K5 1346 aa34.93■■■■□ 3.18
U2AF1-208ENST00000471250 CPSF1Q10570 1443 aaKnown RBP34.93■■■■□ 3.18
U2AF1-208ENST00000471250 CDC42BPGQ6DT37 1551 aa34.91■■■■□ 3.18
U2AF1-208ENST00000471250 TOPAZ1Q8N9V7 1692 aa34.91■■■■□ 3.18
U2AF1-208ENST00000471250 ANKRD26Q9UPS8 1709 aa34.89■■■■□ 3.18
U2AF1-208ENST00000471250 INSRP06213 1382 aa34.88■■■■□ 3.17
U2AF1-208ENST00000471250 AKAP12Q02952 1782 aa34.87■■■■□ 3.17
U2AF1-208ENST00000471250 KIF20BQ96Q89 1820 aa34.86■■■■□ 3.17
U2AF1-208ENST00000471250 ZBED9Q6R2W3 1325 aa34.86■■■■□ 3.17
U2AF1-208ENST00000471250 ITSN1Q15811 1721 aa34.85■■■■□ 3.17
U2AF1-208ENST00000471250 FYB1O15117 783 aa34.85■■■■□ 3.17
U2AF1-208ENST00000471250 MON2Q7Z3U7 1717 aa34.84■■■■□ 3.17
U2AF1-208ENST00000471250 EDC4Q6P2E9 1401 aaKnown RBP34.83■■■■□ 3.17
U2AF1-208ENST00000471250 NWD1Q149M9 1564 aa34.83■■■■□ 3.17
U2AF1-208ENST00000471250 PLEKHG3A1L390 1219 aa34.82■■■■□ 3.16
U2AF1-208ENST00000471250 ZNF692Q9BU19 519 aaPredicted RBP34.8■■■■□ 3.16
U2AF1-208ENST00000471250 GGNBP2Q9H3C7 697 aa34.8■■■■□ 3.16
U2AF1-208ENST00000471250 POLR3AO14802 1390 aaPredicted RBP34.8■■■■□ 3.16
U2AF1-208ENST00000471250 NALCNQ8IZF0 1738 aa34.78■■■■□ 3.16
U2AF1-208ENST00000471250 FMN2Q9NZ56 1722 aa34.78■■■■□ 3.16
U2AF1-208ENST00000471250 TNNT2P45379 298 aaPredicted RBP34.76■■■■□ 3.16
U2AF1-208ENST00000471250 BLMP54132 1417 aaPredicted RBP34.76■■■■□ 3.16
U2AF1-208ENST00000471250 ANKARQ7Z5J8 1434 aa34.76■■■■□ 3.16
U2AF1-208ENST00000471250 NUTM2FA1L443 756 aa34.76■■■■□ 3.15
U2AF1-208ENST00000471250 NKTRP30414 1462 aaKnown RBP34.74■■■■□ 3.15
U2AF1-208ENST00000471250 WDR43Q15061 677 aaKnown RBP eCLIP34.73■■■■□ 3.15
U2AF1-208ENST00000471250 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.73■■■■□ 3.15
U2AF1-208ENST00000471250 RGPD8O14715 1765 aaPredicted RBP34.73■■■■□ 3.15
U2AF1-208ENST00000471250 LMTK3Q96Q04 1460 aa34.72■■■■□ 3.15
U2AF1-208ENST00000471250 ACEP12821 1306 aa34.71■■■■□ 3.15
U2AF1-208ENST00000471250 SCAF1Q9H7N4 1312 aaKnown RBP34.71■■■■□ 3.15
U2AF1-208ENST00000471250 HSPA2P54652 639 aa34.71■■■■□ 3.15
U2AF1-208ENST00000471250 ADAMTS8Q9UP79 889 aa34.71■■■■□ 3.15
U2AF1-208ENST00000471250 ADGRL3Q9HAR2 1447 aa34.7■■■■□ 3.15
U2AF1-208ENST00000471250 GTF3C3Q9Y5Q9 886 aa34.7■■■■□ 3.14
U2AF1-208ENST00000471250 NRKQ7Z2Y5 1582 aa34.69■■■■□ 3.14
U2AF1-208ENST00000471250 MTHFSP49914 203 aa34.69■■■■□ 3.14
U2AF1-208ENST00000471250 USP6P35125 1406 aa34.65■■■■□ 3.14
U2AF1-208ENST00000471250 CFAP53Q96M91 514 aa34.64■■■■□ 3.14
U2AF1-208ENST00000471250 SHPRHQ149N8 1683 aa34.64■■■■□ 3.14
U2AF1-208ENST00000471250 NME9Q86XW9 330 aa34.63■■■■□ 3.13
U2AF1-208ENST00000471250 RBM33Q96EV2 1170 aaKnown RBP34.63■■■■□ 3.13
U2AF1-208ENST00000471250 TTC21BQ7Z4L5 1316 aa34.62■■■■□ 3.13
U2AF1-208ENST00000471250 SSH2Q76I76 1423 aa34.61■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms