RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 PREX2Q70Z35 1606 aa4.42□□□□□ -1.7
CCNL1-214ENST00000471247 SSTR3P32745 418 aaPredicted RBP4.42□□□□□ -1.7
CCNL1-214ENST00000471247 E9PCH4 1651 aa4.42□□□□□ -1.7
CCNL1-214ENST00000471247 KDM5DQ9BY66 1539 aa4.41□□□□□ -1.7
CCNL1-214ENST00000471247 LILRB3O75022 631 aa4.41□□□□□ -1.7
CCNL1-214ENST00000471247 NUDT7P0C024 238 aa4.41□□□□□ -1.7
CCNL1-214ENST00000471247 TMEM259Q4ZIN3 620 aa4.41□□□□□ -1.7
CCNL1-214ENST00000471247 ZNF454Q8N9F8 522 aa4.41□□□□□ -1.7
CCNL1-214ENST00000471247 NECTIN2Q92692 538 aa4.41□□□□□ -1.7
CCNL1-214ENST00000471247 GOLGA3Q08378 1498 aa4.41□□□□□ -1.7
CCNL1-214ENST00000471247 VWDEQ8N2E2 1590 aa4.41□□□□□ -1.7
CCNL1-214ENST00000471247 MAGI2Q86UL8 1455 aa4.41□□□□□ -1.7
CCNL1-214ENST00000471247 PACS2Q86VP3 889 aa4.4□□□□□ -1.7
CCNL1-214ENST00000471247 YTHDC1Q96MU7 727 aaKnown RBP4.4□□□□□ -1.7
CCNL1-214ENST00000471247 GPBP1L1Q9HC44 474 aaPredicted RBP4.4□□□□□ -1.7
CCNL1-214ENST00000471247 VPS9D1Q9Y2B5 631 aa4.4□□□□□ -1.7
CCNL1-214ENST00000471247 MAP3K7O43318 606 aa4.4□□□□□ -1.71
CCNL1-214ENST00000471247 GCGRP47871 477 aa4.4□□□□□ -1.71
CCNL1-214ENST00000471247 ARXQ96QS3 562 aa4.4□□□□□ -1.71
CCNL1-214ENST00000471247 ITSN2Q9NZM3 1697 aa4.4□□□□□ -1.71
CCNL1-214ENST00000471247 MAGI1Q96QZ7 1491 aaPredicted RBP4.4□□□□□ -1.71
CCNL1-214ENST00000471247 IFT140Q96RY7 1462 aa4.4□□□□□ -1.71
CCNL1-214ENST00000471247 FYCO1Q9BQS8 1478 aa4.4□□□□□ -1.71
CCNL1-214ENST00000471247 MROH1Q8NDA8 1641 aa4.4□□□□□ -1.71
CCNL1-214ENST00000471247 RAPGEF6Q8TEU7 1601 aa4.4□□□□□ -1.71
CCNL1-214ENST00000471247 C3orf80F5H4A9 247 aa4.4□□□□□ -1.71
CCNL1-214ENST00000471247 BCL11AQ9H165 835 aa4.4□□□□□ -1.71
CCNL1-214ENST00000471247 DNMT1P26358 1616 aaKnown RBP4.39□□□□□ -1.71
CCNL1-214ENST00000471247 SPDYE5A6NIY4 337 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 DESI1Q6ICB0 168 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 SULF1Q8IWU6 871 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 SPIRE2Q8WWL2 714 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 ZMYND15Q9H091 742 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.39□□□□□ -1.71
CCNL1-214ENST00000471247 KDM6BO15054 1643 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 MAP3K4Q9Y6R4 1608 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 UNC13BO14795 1591 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 KIF13AQ9H1H9 1805 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 MYSM1Q5VVJ2 828 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 RSBN1LQ6PCB5 846 aaPredicted RBP4.39□□□□□ -1.71
CCNL1-214ENST00000471247 ARAP3Q8WWN8 1544 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 SETD1AO15047 1707 aaKnown RBP4.39□□□□□ -1.71
CCNL1-214ENST00000471247 ZC3H13Q5T200 1668 aaKnown RBP4.39□□□□□ -1.71
CCNL1-214ENST00000471247 RCCD1A6NED2 376 aa4.39□□□□□ -1.71
CCNL1-214ENST00000471247 MAPKBP1O60336 1514 aa4.38□□□□□ -1.71
CCNL1-214ENST00000471247 ABCA6Q8N139 1617 aa4.38□□□□□ -1.71
CCNL1-214ENST00000471247 SUPT6HQ7KZ85 1726 aaKnown RBP4.38□□□□□ -1.71
CCNL1-214ENST00000471247 PLXNC1O60486 1568 aa4.38□□□□□ -1.71
CCNL1-214ENST00000471247 POTEB3A0JP26 581 aa4.38□□□□□ -1.71
CCNL1-214ENST00000471247 ST18O60284 1047 aa4.38□□□□□ -1.71
CCNL1-214ENST00000471247 CENPBP07199 599 aaPredicted RBP4.38□□□□□ -1.71
CCNL1-214ENST00000471247 POTEBQ6S5H4 581 aa4.38□□□□□ -1.71
CCNL1-214ENST00000471247 PCMTD1Q96MG8 357 aaPredicted RBP4.38□□□□□ -1.71
CCNL1-214ENST00000471247 MYO5CQ9NQX4 1742 aa4.37□□□□□ -1.71
CCNL1-214ENST00000471247 ABCC10Q5T3U5 1492 aa4.37□□□□□ -1.71
CCNL1-214ENST00000471247 LAMC1P11047 1609 aa4.37□□□□□ -1.71
CCNL1-214ENST00000471247 ZNF608Q9ULD9 1512 aaPredicted RBP4.37□□□□□ -1.71
CCNL1-214ENST00000471247 ARHGEF5Q12774 1597 aa4.37□□□□□ -1.71
CCNL1-214ENST00000471247 RAD54L2Q9Y4B4 1467 aa4.37□□□□□ -1.71
CCNL1-214ENST00000471247 RNF17Q9BXT8 1623 aaKnown RBP4.37□□□□□ -1.71
CCNL1-214ENST00000471247 TBC1D2Q9BYX2 928 aa4.36□□□□□ -1.71
CCNL1-214ENST00000471247 CLIP1P30622 1438 aa4.36□□□□□ -1.71
CCNL1-214ENST00000471247 FAM98CQ17RN3 349 aaKnown RBP4.36□□□□□ -1.71
CCNL1-214ENST00000471247 PCDH10Q9P2E7 1040 aa4.36□□□□□ -1.71
CCNL1-214ENST00000471247 UHRF1BP1LA0JNW5 1464 aa4.36□□□□□ -1.71
CCNL1-214ENST00000471247 RICTORQ6R327 1708 aa4.36□□□□□ -1.71
CCNL1-214ENST00000471247 ZCCHC11Q5TAX3 1644 aaKnown RBP4.36□□□□□ -1.71
CCNL1-214ENST00000471247 INO80Q9ULG1 1556 aaPredicted RBP4.36□□□□□ -1.71
CCNL1-214ENST00000471247 MCM6Q14566 821 aa4.35□□□□□ -1.71
CCNL1-214ENST00000471247 FRMPD1Q5SYB0 1578 aa4.35□□□□□ -1.71
CCNL1-214ENST00000471247 ZNF710Q8N1W2 664 aa4.35□□□□□ -1.71
CCNL1-214ENST00000471247 VPS8Q8N3P4 1428 aa4.35□□□□□ -1.71
CCNL1-214ENST00000471247 KIF14Q15058 1648 aa4.35□□□□□ -1.71
CCNL1-214ENST00000471247 FBXO31Q5XUX0 539 aaPredicted RBP4.35□□□□□ -1.71
CCNL1-214ENST00000471247 RIC3Q7Z5B4 369 aa4.35□□□□□ -1.71
CCNL1-214ENST00000471247 CEP162Q5TB80 1403 aa4.35□□□□□ -1.71
CCNL1-214ENST00000471247 GRIN2AQ12879 1464 aa4.35□□□□□ -1.71
CCNL1-214ENST00000471247 ERCC6L2Q5T890 1561 aa4.34□□□□□ -1.71
CCNL1-214ENST00000471247 PIK3C2BO00750 1634 aa4.34□□□□□ -1.71
CCNL1-214ENST00000471247 HRCP23327 699 aa4.34□□□□□ -1.71
CCNL1-214ENST00000471247 DMRTA1Q5VZB9 504 aa4.34□□□□□ -1.71
CCNL1-214ENST00000471247 ACTN4O43707 911 aaKnown RBP4.34□□□□□ -1.71
CCNL1-214ENST00000471247 IFFO2Q5TF58 517 aa4.34□□□□□ -1.71
CCNL1-214ENST00000471247 ZC3H4Q9UPT8 1303 aaKnown RBP4.34□□□□□ -1.71
CCNL1-214ENST00000471247 NYAP1Q6ZVC0 841 aa4.34□□□□□ -1.72
CCNL1-214ENST00000471247 NUDT18Q6ZVK8 323 aa4.34□□□□□ -1.72
CCNL1-214ENST00000471247 EIF2AK4Q9P2K8 1649 aaKnown RBP4.33□□□□□ -1.72
CCNL1-214ENST00000471247 AKNAQ7Z591 1439 aa4.33□□□□□ -1.72
CCNL1-214ENST00000471247 CASKIN1Q8WXD9 1431 aa4.33□□□□□ -1.72
CCNL1-214ENST00000471247 CLK2P49760 499 aaKnown RBP4.33□□□□□ -1.72
CCNL1-214ENST00000471247 MDM2Q00987 491 aaPredicted RBP4.33□□□□□ -1.72
CCNL1-214ENST00000471247 BEGAINQ9BUH8 593 aa4.33□□□□□ -1.72
CCNL1-214ENST00000471247 KDM5AP29375 1690 aaKnown RBP4.33□□□□□ -1.72
CCNL1-214ENST00000471247 CAMSAP1Q5T5Y3 1602 aa4.33□□□□□ -1.72
CCNL1-214ENST00000471247 HOXA2O43364 376 aa4.33□□□□□ -1.72
CCNL1-214ENST00000471247 GPR37L1O60883 481 aa4.33□□□□□ -1.72
CCNL1-214ENST00000471247 SLF2Q8IX21 1173 aa4.33□□□□□ -1.72
CCNL1-214ENST00000471247 KIAA1468Q9P260 1216 aa4.33□□□□□ -1.72
CCNL1-214ENST00000471247 ADGRL2O95490 1459 aa4.32□□□□□ -1.72
CCNL1-214ENST00000471247 IL27Q8NEV9 243 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms