RNA–Protein interactions for RNA: ENST00000471030.1

LSMEM1-204, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 483 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-204ENST00000471030 ATP10AO60312 1499 aa8.59□□□□□ -1.03
LSMEM1-204ENST00000471030 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
LSMEM1-204ENST00000471030 PCDHGA4Q9Y5G9 962 aa8.59□□□□□ -1.03
LSMEM1-204ENST00000471030 WASHC2CQ9Y4E1 1318 aa8.58□□□□□ -1.04
LSMEM1-204ENST00000471030 CARD11Q9BXL7 1154 aa8.58□□□□□ -1.04
LSMEM1-204ENST00000471030 PCDH10Q9P2E7 1040 aa8.58□□□□□ -1.04
LSMEM1-204ENST00000471030 FAM135AQ9P2D6 1515 aa8.58□□□□□ -1.04
LSMEM1-204ENST00000471030 SAMD9LQ8IVG5 1584 aa8.57□□□□□ -1.04
LSMEM1-204ENST00000471030 HAP1P54257 671 aaPredicted RBP8.57□□□□□ -1.04
LSMEM1-204ENST00000471030 HNRNPUQ00839 825 aaKnown RBP eCLIP8.57□□□□□ -1.04
LSMEM1-204ENST00000471030 RALBP1Q15311 655 aa8.57□□□□□ -1.04
LSMEM1-204ENST00000471030 GPR153Q6NV75 609 aa8.57□□□□□ -1.04
LSMEM1-204ENST00000471030 KCNH8Q96L42 1107 aa8.57□□□□□ -1.04
LSMEM1-204ENST00000471030 CLASP1Q7Z460 1538 aa8.57□□□□□ -1.04
LSMEM1-204ENST00000471030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.57□□□□□ -1.04
LSMEM1-204ENST00000471030 ZBED9Q6R2W3 1325 aa8.56□□□□□ -1.04
LSMEM1-204ENST00000471030 ARSIQ5FYB1 569 aa8.56□□□□□ -1.04
LSMEM1-204ENST00000471030 MRS2Q9HD23 443 aa8.56□□□□□ -1.04
LSMEM1-204ENST00000471030 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
LSMEM1-204ENST00000471030 CHD1O14646 1710 aa8.56□□□□□ -1.04
LSMEM1-204ENST00000471030 WDR7Q9Y4E6 1490 aa8.56□□□□□ -1.04
LSMEM1-204ENST00000471030 UNC13BO14795 1591 aa8.56□□□□□ -1.04
LSMEM1-204ENST00000471030 ERBB3P21860 1342 aa8.55□□□□□ -1.04
LSMEM1-204ENST00000471030 SYCP2Q9BX26 1530 aa8.55□□□□□ -1.04
LSMEM1-204ENST00000471030 MAP3K9P80192 1104 aa8.55□□□□□ -1.04
LSMEM1-204ENST00000471030 E2F4Q16254 413 aa8.55□□□□□ -1.04
LSMEM1-204ENST00000471030 GPRASP1Q5JY77 1395 aa8.55□□□□□ -1.04
LSMEM1-204ENST00000471030 MAGI2Q86UL8 1455 aa8.55□□□□□ -1.04
LSMEM1-204ENST00000471030 KANK1Q14678 1352 aa8.54□□□□□ -1.04
LSMEM1-204ENST00000471030 CDCA8Q53HL2 280 aa8.54□□□□□ -1.04
LSMEM1-204ENST00000471030 OXER1Q8TDS5 423 aa8.54□□□□□ -1.04
LSMEM1-204ENST00000471030 DCAF11Q8TEB1 546 aa8.54□□□□□ -1.04
LSMEM1-204ENST00000471030 MARVELD3Q96A59 401 aa8.54□□□□□ -1.04
LSMEM1-204ENST00000471030 POLR1AO95602 1720 aaPredicted RBP8.54□□□□□ -1.04
LSMEM1-204ENST00000471030 MYO5CQ9NQX4 1742 aa8.54□□□□□ -1.04
LSMEM1-204ENST00000471030 SPAG9O60271 1321 aaKnown RBP8.54□□□□□ -1.04
LSMEM1-204ENST00000471030 CAMK2BQ13554 666 aa8.53□□□□□ -1.04
LSMEM1-204ENST00000471030 ZNF326Q5BKZ1 582 aaKnown RBP8.53□□□□□ -1.04
LSMEM1-204ENST00000471030 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
LSMEM1-204ENST00000471030 UPF1Q92900 1129 aaKnown RBP eCLIP8.53□□□□□ -1.04
LSMEM1-204ENST00000471030 CDC42BPBQ9Y5S2 1711 aa8.53□□□□□ -1.04
LSMEM1-204ENST00000471030 EIF2AK4Q9P2K8 1649 aaKnown RBP8.53□□□□□ -1.04
LSMEM1-204ENST00000471030 PRAG1Q86YV5 1406 aa8.53□□□□□ -1.04
LSMEM1-204ENST00000471030 INSRP06213 1382 aa8.52□□□□□ -1.05
LSMEM1-204ENST00000471030 IQGAP3Q86VI3 1631 aa8.52□□□□□ -1.05
LSMEM1-204ENST00000471030 C11orf95C9JLR9 678 aaPredicted RBP8.52□□□□□ -1.05
LSMEM1-204ENST00000471030 KDM5CP41229 1560 aa8.52□□□□□ -1.05
LSMEM1-204ENST00000471030 TTC37Q6PGP7 1564 aa8.52□□□□□ -1.05
LSMEM1-204ENST00000471030 BRD4O60885 1362 aaPredicted RBP8.51□□□□□ -1.05
LSMEM1-204ENST00000471030 ABCC1P33527 1531 aa8.51□□□□□ -1.05
LSMEM1-204ENST00000471030 FAM205CA6NFA0 338 aa8.51□□□□□ -1.05
LSMEM1-204ENST00000471030 NUDT7P0C024 238 aa8.51□□□□□ -1.05
LSMEM1-204ENST00000471030 LAMC1P11047 1609 aa8.51□□□□□ -1.05
LSMEM1-204ENST00000471030 DHX29Q7Z478 1369 aaKnown RBP8.5□□□□□ -1.05
LSMEM1-204ENST00000471030 MYBBP1AQ9BQG0 1328 aaKnown RBP8.5□□□□□ -1.05
LSMEM1-204ENST00000471030 NEURL4Q96JN8 1562 aa8.49□□□□□ -1.05
LSMEM1-204ENST00000471030 ST20-MTHFSA0A0A6YYL1 179 aa8.49□□□□□ -1.05
LSMEM1-204ENST00000471030 TMF1P82094 1093 aa8.49□□□□□ -1.05
LSMEM1-204ENST00000471030 TMC1Q8TDI8 760 aa8.49□□□□□ -1.05
LSMEM1-204ENST00000471030 HS3ST6Q96QI5 342 aa8.49□□□□□ -1.05
LSMEM1-204ENST00000471030 ZCCHC11Q5TAX3 1644 aaKnown RBP8.49□□□□□ -1.05
LSMEM1-204ENST00000471030 EIF3AQ14152 1382 aaKnown RBP8.48□□□□□ -1.05
LSMEM1-204ENST00000471030 PDE3BQ13370 1112 aa8.48□□□□□ -1.05
LSMEM1-204ENST00000471030 VARS2Q5ST30 1063 aaKnown RBP8.48□□□□□ -1.05
LSMEM1-204ENST00000471030 NLRP13Q86W25 1043 aa8.48□□□□□ -1.05
LSMEM1-204ENST00000471030 FAM9BQ8IZU0 186 aa8.48□□□□□ -1.05
LSMEM1-204ENST00000471030 VSIG10Q8N0Z9 540 aa8.48□□□□□ -1.05
LSMEM1-204ENST00000471030 KDM2AQ9Y2K7 1162 aa8.48□□□□□ -1.05
LSMEM1-204ENST00000471030 ZMYM4Q5VZL5 1548 aa8.48□□□□□ -1.05
LSMEM1-204ENST00000471030 PTPRTO14522 1441 aa8.47□□□□□ -1.05
LSMEM1-204ENST00000471030 PLA2R1Q13018 1463 aa8.47□□□□□ -1.05
LSMEM1-204ENST00000471030 SPDYE16A6NNV3 312 aaPredicted RBP8.47□□□□□ -1.05
LSMEM1-204ENST00000471030 EVI5O60447 810 aa8.47□□□□□ -1.05
LSMEM1-204ENST00000471030 PPP4R3BQ5MIZ7 849 aa8.47□□□□□ -1.05
LSMEM1-204ENST00000471030 PPP4R2Q9NY27 417 aa8.47□□□□□ -1.05
LSMEM1-204ENST00000471030 ARIH1Q9Y4X5 557 aaPredicted RBP8.47□□□□□ -1.05
LSMEM1-204ENST00000471030 SMG6Q86US8 1419 aaKnown RBP8.46□□□□□ -1.05
LSMEM1-204ENST00000471030 SCAPERQ9BY12 1400 aa8.46□□□□□ -1.05
LSMEM1-204ENST00000471030 FANCAO15360 1455 aa8.46□□□□□ -1.05
LSMEM1-204ENST00000471030 PRDM15P57071 1507 aaPredicted RBP8.46□□□□□ -1.05
LSMEM1-204ENST00000471030 EMILIN3Q9NT22 766 aa8.46□□□□□ -1.06
LSMEM1-204ENST00000471030 TRAPPC8Q9Y2L5 1435 aa8.46□□□□□ -1.06
LSMEM1-204ENST00000471030 A2MP01023 1474 aa8.45□□□□□ -1.06
LSMEM1-204ENST00000471030 TRPM2O94759 1503 aa8.45□□□□□ -1.06
LSMEM1-204ENST00000471030 PBX2P40425 430 aa8.45□□□□□ -1.06
LSMEM1-204ENST00000471030 PNISRQ8TF01 805 aaKnown RBP8.45□□□□□ -1.06
LSMEM1-204ENST00000471030 KHSRPQ92945 711 aaKnown RBP eCLIP8.45□□□□□ -1.06
LSMEM1-204ENST00000471030 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
LSMEM1-204ENST00000471030 LHX6Q9UPM6 363 aa8.45□□□□□ -1.06
LSMEM1-204ENST00000471030 ZFYVE16Q7Z3T8 1539 aa8.44□□□□□ -1.06
LSMEM1-204ENST00000471030 ERCC6L2Q5T890 1561 aa8.44□□□□□ -1.06
LSMEM1-204ENST00000471030 ABCA9Q8IUA7 1624 aa8.44□□□□□ -1.06
LSMEM1-204ENST00000471030 DPYSL4O14531 572 aa8.44□□□□□ -1.06
LSMEM1-204ENST00000471030 RGL3Q3MIN7 710 aa8.44□□□□□ -1.06
LSMEM1-204ENST00000471030 CDAN1Q8IWY9 1227 aa8.44□□□□□ -1.06
LSMEM1-204ENST00000471030 ARHGEF1Q92888 912 aaKnown RBP8.44□□□□□ -1.06
LSMEM1-204ENST00000471030 ANO8Q9HCE9 1232 aaPredicted RBP8.44□□□□□ -1.06
LSMEM1-204ENST00000471030 NUDCQ9Y266 331 aa8.44□□□□□ -1.06
LSMEM1-204ENST00000471030 ADGRL1O94910 1474 aa8.44□□□□□ -1.06
LSMEM1-204ENST00000471030 ZNF518AQ6AHZ1 1483 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms