RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 A0A0G2JS52 829 aa18.04■□□□□ 0.48
ARHGEF39-202ENST00000468876 MYT1Q01538 1121 aa18.04■□□□□ 0.48
ARHGEF39-202ENST00000468876 CCDC9Q9Y3X0 531 aaKnown RBP18.04■□□□□ 0.48
ARHGEF39-202ENST00000468876 BRWD3Q6RI45 1802 aa18.04■□□□□ 0.48
ARHGEF39-202ENST00000468876 TMEM131LA2VDJ0 1609 aa18.04■□□□□ 0.48
ARHGEF39-202ENST00000468876 ANKRD50Q9ULJ7 1429 aa18.04■□□□□ 0.48
ARHGEF39-202ENST00000468876 SPHKAPQ2M3C7 1700 aa18.03■□□□□ 0.48
ARHGEF39-202ENST00000468876 PPP1R1BQ9UD71 204 aaPredicted RBP18.03■□□□□ 0.48
ARHGEF39-202ENST00000468876 RPRD2Q5VT52 1461 aaKnown RBP18.02■□□□□ 0.48
ARHGEF39-202ENST00000468876 COL22A1Q8NFW1 1626 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF39-202ENST00000468876 PPARGC1BQ86YN6 1023 aaKnown RBP18■□□□□ 0.47
ARHGEF39-202ENST00000468876 ZNF784Q8NCA9 323 aaPredicted RBP18■□□□□ 0.47
ARHGEF39-202ENST00000468876 XRN1Q8IZH2 1706 aaKnown RBP17.99■□□□□ 0.47
ARHGEF39-202ENST00000468876 LAMC1P11047 1609 aa17.98■□□□□ 0.47
ARHGEF39-202ENST00000468876 C1QTNF8P60827 252 aa17.98■□□□□ 0.47
ARHGEF39-202ENST00000468876 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.97■□□□□ 0.47
ARHGEF39-202ENST00000468876 MARF1Q9Y4F3 1742 aaKnown RBP17.97■□□□□ 0.47
ARHGEF39-202ENST00000468876 NALCNQ8IZF0 1738 aa17.95■□□□□ 0.46
ARHGEF39-202ENST00000468876 SLIT2O94813 1529 aa17.95■□□□□ 0.46
ARHGEF39-202ENST00000468876 XPCQ01831 940 aaPredicted RBP17.95■□□□□ 0.46
ARHGEF39-202ENST00000468876 E9PCH4 1651 aa17.95■□□□□ 0.46
ARHGEF39-202ENST00000468876 NPHP3Q7Z494 1330 aa17.95■□□□□ 0.46
ARHGEF39-202ENST00000468876 IQGAP3Q86VI3 1631 aa17.94■□□□□ 0.46
ARHGEF39-202ENST00000468876 VPS72Q15906 364 aa17.94■□□□□ 0.46
ARHGEF39-202ENST00000468876 EZH2Q15910 746 aaKnown RBP17.94■□□□□ 0.46
ARHGEF39-202ENST00000468876 METP08581 1390 aa17.93■□□□□ 0.46
ARHGEF39-202ENST00000468876 ROCK1Q13464 1354 aa17.93■□□□□ 0.46
ARHGEF39-202ENST00000468876 HAP1P54257 671 aaPredicted RBP17.92■□□□□ 0.46
ARHGEF39-202ENST00000468876 ONECUT3O60422 494 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF39-202ENST00000468876 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
ARHGEF39-202ENST00000468876 ITGAEP38570 1179 aa17.89■□□□□ 0.45
ARHGEF39-202ENST00000468876 FAM182BQ5T319 152 aa17.89■□□□□ 0.45
ARHGEF39-202ENST00000468876 NINLQ9Y2I6 1382 aa17.89■□□□□ 0.45
ARHGEF39-202ENST00000468876 FOXO3O43524 673 aa17.88■□□□□ 0.45
ARHGEF39-202ENST00000468876 SPON1Q9HCB6 807 aa17.88■□□□□ 0.45
ARHGEF39-202ENST00000468876 RGPD1P0DJD0 1748 aa17.87■□□□□ 0.45
ARHGEF39-202ENST00000468876 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
ARHGEF39-202ENST00000468876 FAM98CQ17RN3 349 aaKnown RBP17.87■□□□□ 0.45
ARHGEF39-202ENST00000468876 PXDNQ92626 1479 aa17.86■□□□□ 0.45
ARHGEF39-202ENST00000468876 NRXN3Q9Y4C0 1643 aa17.86■□□□□ 0.45
ARHGEF39-202ENST00000468876 ZNF326Q5BKZ1 582 aaKnown RBP17.85■□□□□ 0.45
ARHGEF39-202ENST00000468876 DISP2A7MBM2 1401 aa17.84■□□□□ 0.45
ARHGEF39-202ENST00000468876 RRBP1Q9P2E9 1410 aaKnown RBP17.84■□□□□ 0.45
ARHGEF39-202ENST00000468876 KCNQ2O43526 872 aa17.83■□□□□ 0.44
ARHGEF39-202ENST00000468876 NBPF8Q3BBV2 869 aa17.83■□□□□ 0.44
ARHGEF39-202ENST00000468876 NBPF14Q5TI25 921 aa17.83■□□□□ 0.44
ARHGEF39-202ENST00000468876 CAMKK2Q96RR4 588 aa17.83■□□□□ 0.44
ARHGEF39-202ENST00000468876 LRPPRCP42704 1394 aaKnown RBP17.82■□□□□ 0.44
ARHGEF39-202ENST00000468876 CAMTA1Q9Y6Y1 1673 aa17.82■□□□□ 0.44
ARHGEF39-202ENST00000468876 NUP155O75694 1391 aa17.81■□□□□ 0.44
ARHGEF39-202ENST00000468876 USP32Q8NFA0 1604 aa17.81■□□□□ 0.44
ARHGEF39-202ENST00000468876 APBA3O96018 575 aa17.8■□□□□ 0.44
ARHGEF39-202ENST00000468876 TRIM37O94972 964 aa17.79■□□□□ 0.44
ARHGEF39-202ENST00000468876 ROBO2Q9HCK4 1378 aa17.79■□□□□ 0.44
ARHGEF39-202ENST00000468876 ADGRB2O60241 1585 aa17.78■□□□□ 0.44
ARHGEF39-202ENST00000468876 SPATA31A3Q5VYP0 1347 aa17.77■□□□□ 0.44
ARHGEF39-202ENST00000468876 NUTM2FA1L443 756 aa17.77■□□□□ 0.44
ARHGEF39-202ENST00000468876 CABLES1Q8TDN4 633 aa17.77■□□□□ 0.44
ARHGEF39-202ENST00000468876 NAIPQ13075 1403 aa17.76■□□□□ 0.43
ARHGEF39-202ENST00000468876 GIGYF1O75420 1035 aaPredicted RBP17.76■□□□□ 0.43
ARHGEF39-202ENST00000468876 PARD3Q8TEW0 1356 aa17.76■□□□□ 0.43
ARHGEF39-202ENST00000468876 TNS1Q9HBL0 1735 aaKnown RBP17.75■□□□□ 0.43
ARHGEF39-202ENST00000468876 CLTCL1P53675 1640 aa17.75■□□□□ 0.43
ARHGEF39-202ENST00000468876 PLCH1Q4KWH8 1693 aa17.74■□□□□ 0.43
ARHGEF39-202ENST00000468876 NWD2Q9ULI1 1742 aa17.72■□□□□ 0.43
ARHGEF39-202ENST00000468876 LMOD2Q6P5Q4 547 aa17.72■□□□□ 0.43
ARHGEF39-202ENST00000468876 FAM196AQ6ZSG2 479 aa17.71■□□□□ 0.43
ARHGEF39-202ENST00000468876 KRT28Q7Z3Y7 464 aa17.71■□□□□ 0.43
ARHGEF39-202ENST00000468876 FAM83GA6ND36 823 aa17.7■□□□□ 0.42
ARHGEF39-202ENST00000468876 HFM1A2PYH4 1435 aa17.7■□□□□ 0.42
ARHGEF39-202ENST00000468876 BTG4Q9NY30 223 aa17.69■□□□□ 0.42
ARHGEF39-202ENST00000468876 CCDC144AA2RUR9 1427 aa17.68■□□□□ 0.42
ARHGEF39-202ENST00000468876 NEXMIFQ5QGS0 1516 aa17.67■□□□□ 0.42
ARHGEF39-202ENST00000468876 CDC42BPGQ6DT37 1551 aa17.66■□□□□ 0.42
ARHGEF39-202ENST00000468876 TNS3Q68CZ2 1445 aa17.65■□□□□ 0.42
ARHGEF39-202ENST00000468876 NUP188Q5SRE5 1749 aa17.65■□□□□ 0.42
ARHGEF39-202ENST00000468876 RREB1Q92766 1687 aa17.64■□□□□ 0.42
ARHGEF39-202ENST00000468876 PSME1Q06323 249 aa17.64■□□□□ 0.41
ARHGEF39-202ENST00000468876 NRKQ7Z2Y5 1582 aa17.64■□□□□ 0.41
ARHGEF39-202ENST00000468876 SPATA31A5Q5VU36 1347 aa17.63■□□□□ 0.41
ARHGEF39-202ENST00000468876 SPATA31A7Q8IWB4 1347 aa17.63■□□□□ 0.41
ARHGEF39-202ENST00000468876 ZBTB7AO95365 584 aa17.61■□□□□ 0.41
ARHGEF39-202ENST00000468876 SYT17Q9BSW7 474 aa17.6■□□□□ 0.41
ARHGEF39-202ENST00000468876 FHDC1Q9C0D6 1143 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF39-202ENST00000468876 NRAPQ86VF7 1730 aa17.6■□□□□ 0.41
ARHGEF39-202ENST00000468876 CHD4Q14839 1912 aa17.59■□□□□ 0.41
ARHGEF39-202ENST00000468876 KIF1BO60333 1816 aa17.58■□□□□ 0.41
ARHGEF39-202ENST00000468876 THSD7AQ9UPZ6 1657 aa17.58■□□□□ 0.41
ARHGEF39-202ENST00000468876 ARHGEF10O15013 1369 aa17.58■□□□□ 0.4
ARHGEF39-202ENST00000468876 PDE3BQ13370 1112 aa17.58■□□□□ 0.4
ARHGEF39-202ENST00000468876 ATF5Q9Y2D1 282 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF39-202ENST00000468876 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
ARHGEF39-202ENST00000468876 CEP350Q5VT06 3117 aa17.57■□□□□ 0.4
ARHGEF39-202ENST00000468876 KIF1AQ12756 1690 aa17.56■□□□□ 0.4
ARHGEF39-202ENST00000468876 VGFO15240 615 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF39-202ENST00000468876 MYOM1P52179 1685 aa17.55■□□□□ 0.4
ARHGEF39-202ENST00000468876 PHF8Q9UPP1 1060 aa17.55■□□□□ 0.4
ARHGEF39-202ENST00000468876 ABCA3Q99758 1704 aa17.55■□□□□ 0.4
ARHGEF39-202ENST00000468876 GPR162Q16538 588 aa17.54■□□□□ 0.4
ARHGEF39-202ENST00000468876 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms